BioLiP

>protein
SNYVIQADQQLLDALRAHYEGALSDRLPAGALFAVKRPDVVITAYRSGKVLFQGKAAEQEAAKWISGASASNETADHQPS
ALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPAIMETVPHAVTVLDNPQ
YNRWQRSGMPQTKMKALLHNRTLVKLVDAIAPAEPEAIIIDEFLKRDSYFRYLSDEDRIIRERVHCLPKAESVHVSVAAA
SIIARYVFLEEMEQLSRAVGLLLPKGAGAIVDEAAARIIRARGEEMLETCAKLHFANTKKALAIAKRR

The query sequence (length=308) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	2d0b:A	308	308	1.0000	1.0000	1.0000	0.0	2d0c:A
2	4py5:A	267	272	0.2435	0.2809	0.2757	1.79e-26
3	2x0i:A	294	73	0.0714	0.0748	0.3014	0.49	2x0j:A
4	2ft0:A	222	56	0.0617	0.0856	0.3393	1.0	2ft0:B
5	4j7g:A	448	48	0.0519	0.0357	0.3333	1.7	4j7g:B, 4j7h:A, 4j7h:B
6	3us9:A	249	113	0.0779	0.0964	0.2124	1.8
7	4r1d:A	517	61	0.0617	0.0368	0.3115	1.8
8	1ais:A	181	35	0.0455	0.0773	0.4000	2.3	1d3u:A
9	6q8u:C	122	32	0.0357	0.0902	0.3438	3.7	4bw0:B, 4c4w:C, 4c4w:G, 5fj4:C, 5fj4:G, 5g4u:C, 5g4u:D, 5g4u:G, 5g4u:H, 5g4u:K, 5g4u:L, 5g4v:C, 5g4v:D, 5g4v:G, 5g4v:H, 6hct:C, 6hct:D, 6hct:G, 6q8u:D, 1rlg:A, 1rlg:B
10	7v31:n	56	57	0.0519	0.2857	0.2807	3.9	7vyg:n, 7w1t:n, 7w1u:n, 7w2l:n
11	8a8g:A	382	61	0.0584	0.0471	0.2951	4.9	8a8d:A, 8a8d:B
12	6iat:D	393	29	0.0390	0.0305	0.4138	9.8	6iat:A, 6iaw:B, 6iaw:C, 6ib1:D, 6ib1:A, 6q3g:A1, 6q3g:D1, 6q3g:J1, 6q3g:L1, 6q3g:R1, 6q3g:T1, 6q3g:Y1, 6q3g:a1, 6q3g:g1, 6q3g:i1, 6q3g:A3, 6q3g:D3, 6q3g:J3, 6q3g:L3, 6q3g:R3, 6q3g:T3, 6q3g:Y3, 6q3g:BK, 6q3g:b3, 6q3g:BD, 6q3g:A4, 6q3g:D4, 6q3g:J4, 6q3g:L4, 6q3g:R4, 6q3g:T4, 6q3g:Y4, 6q3g:a4, 6q3g:g4, 6q3g:i4, 6q3g:A6, 6q3g:D6, 6q3g:J6, 6q3g:L6, 6q3g:R6, 6q3g:T6, 6q3g:Z6, 6q3g:b6, 6q3g:h6, 6q3g:j6, 6q3g:A7, 6q3g:D7, 6q3g:J7, 6q3g:L7, 6q3g:R7, 6q3g:T7, 6q3g:Z7, 6q3g:b7, 6q3g:h7, 6q3g:j7, 6q3g:A8, 6q3g:D8, 6q3g:J8, 6q3g:L8, 6q3g:R8, 6q3g:T8, 6q3g:Z8, 6q3g:b8, 6q3g:h8, 6q3g:j8, 6q3g:CD, 6q3g:DD, 6q3g:DE, 6q3g:BP, 6q3g:BE, 6q3g:FE, 6q3g:LE, 6q3g:NE, 6q3g:TE, 6q3g:VE, 6q3g:bE, 6q3g:dE, 6q3g:AG, 6q3g:DG, 6q3g:JG, 6q3g:LG, 6q3g:RG, 6q3g:TG, 6q3g:ZG, 6q3g:bG, 6q3g:hG, 6q3g:jG, 6q3g:CJ, 6q3g:DJ, 6q3g:CK, 6q3g:DK, 6q3g:AL, 6q3g:DL, 6q3g:JL, 6q3g:LL, 6q3g:RL, 6q3g:TL, 6q3g:ZL, 6q3g:bL, 6q3g:BJ, 6q3g:gL, 6q3g:CP, 6q3g:DP, 6q3g:AQ, 6q3g:DQ, 6q3g:JQ, 6q3g:LQ, 6q3g:RQ, 6q3g:TQ, 6q3g:YQ, 6q3g:AS, 6q3g:cQ, 6q3g:eQ, 6q3g:AR, 6q3g:DR, 6q3g:JR, 6q3g:LR, 6q3g:RR, 6q3g:TR, 6q3g:ZR, 6q3g:bR, 6q3g:hR, 6q3g:jR, 6q3g:BS, 6q3g:CS

[Back]