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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
SNRDLFAELSSALVEAKQHSEGKLTLKTHHVNDVGELNISPDEIVSIREQFNMSRGVFARLLHTSSRTLENWEQGRSVPN
GQAVTLLKLVQRHPETLSHIAEL

The query sequence (length=103) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8a0x:A 103 103 1.0000 1.0000 1.0000 4.65e-72 8a0w:A, 8a0w:B, 8a0x:B
2 3gn5:A 132 62 0.1359 0.1061 0.2258 1.43e-04 3ga8:A, 3gn5:B, 3hi2:A, 3hi2:C, 3o9x:A, 3o9x:B
3 3jxb:C 67 57 0.1262 0.1940 0.2281 0.58 3jxb:D, 3jxc:L, 3jxc:R, 3jxd:L, 3jxd:R, 2r1j:L, 2r1j:R
4 4a2i:D 205 59 0.1650 0.0829 0.2881 0.78 8a3l:D, 7abz:i, 7ac7:i, 7acj:i, 7acr:i, 4adv:D, 5afi:d, 7afi:D, 7afl:D, 7afo:D, 8akn:E, 8am9:E, 6awb:G, 6awc:G, 6awd:G, 9ax7:D, 9ax8:d, 8aye:D, 8b0x:D, 7b5k:d, 8b7y:F, 8bf7:h, 8bge:h, 8bgh:h, 8bh4:h, 8bhj:h, 8bhl:h, 8bhn:h, 8bhp:h, 8bil:h, 8bim:h, 7bod:D, 7boe:D, 7bof:D, 7bog:D, 7boh:D, 7boi:D, 6bu8:D, 6by1:AD, 6by1:BD, 6c4i:d, 8cai:D, 8cep:D, 8cgj:D, 8cgr:D, 8cgu:D, 9cg5:D, 9cg6:D, 9cg7:D, 7cpj:d, 7d6z:k, 7d80:E, 6dnc:QA, 8eiu:D, 8ekc:d, 8emm:D, 6enf:d, 6enj:d, 6enu:d, 8eyq:D, 8eyt:D, 9fbv:D, 8fiz:AI, 8fto:D, 8fzd:d, 8fze:d, 8fzf:d, 8fzg:d, 8fzh:d, 8fzi:d, 8fzj:d, 8g2u:c, 8g31:c, 8g34:c, 8g38:c, 8g6w:D, 8g7p:d, 8g7q:d, 8g7r:d, 8g7s:d, 8ghu:d, 6gwt:d, 6gxm:d, 6gxn:d, 6gxo:d, 6gxp:d, 6h4n:d, 5h5u:k, 6h58:d, 6h58:dd, 6hrm:i, 8hsp:D, 8htz:D, 8hu1:D, 6i7v:AD, 6i7v:BD, 8ifb:D, 8ifc:D, 5iqr:i, 5it8:AD, 5it8:BD, 5j5b:AD, 5j5b:BD, 5j7l:AD, 5j7l:BD, 5j88:AD, 5j88:BD, 5j8a:AD, 5j8a:BD, 3j9y:d, 3j9z:SD, 5j91:AD, 5j91:BD, 3ja1:SD, 3jbu:D, 3jbv:D, 3jcd:d, 3jce:d, 3jcj:l, 3jcn:g, 5jc9:AD, 5jc9:BD, 7jss:I, 7jsw:I, 7jsz:I, 8jsg:l, 8jsh:l, 5jte:AD, 7jt1:I, 7jt2:I, 7jt3:I, 5ju8:AD, 7k00:D, 8k3o:D, 8k4e:D, 7k50:I, 7k51:I, 7k52:I, 7k53:I, 7k54:I, 7k55:I, 5kcr:1d, 5kcs:1d, 5kps:9, 5kpv:8, 5kpw:8, 5kpx:8, 5l3p:d, 6lkq:C, 7lv0:I, 5lza:d, 5lzb:d, 5lzc:d, 5lzd:d, 5lze:d, 5lzf:d, 7m5d:i, 5mdv:i, 5mdw:i, 5mdy:i, 5mdz:i, 5me0:D, 5me1:D, 5mgp:d, 5my1:D, 7n1p:SD, 7n2c:SD, 7n2u:SD, 7n2v:SD, 7n30:SD, 7n31:SD, 7nar:D, 7nas:D, 7nat:D, 7nau:D, 7nav:D, 7nax:D, 7nbu:D, 5no2:D, 5no3:D, 5no4:D, 5np6:G, 6nqb:D, 7nso:d, 7nsp:d, 7nsq:d, 5nwy:3, 7nwt:i, 7nww:h, 7o19:AD, 7o1a:AD, 7o1c:AD, 5o2r:d, 7o5h:D, 6o7k:l, 6o9j:d, 6o9k:d, 7oe0:D, 7oe1:D, 6ofx:I, 6og7:I, 6ogf:I, 6ogg:I, 6ogi:I, 7oi0:D, 7oif:h, 7oig:h, 7oii:h, 7oiz:D, 7oj0:D, 6om6:i, 6ore:i, 6orl:i, 6osk:i, 6osq:i, 6ost:i, 6ot3:i, 7ot5:h, 7otc:d, 6ouo:i, 8p16:i, 8p17:i, 8p18:i, 7p3k:D, 8peg:D, 8phj:D, 7pjs:d, 7pjt:d, 7pju:d, 7pjv:d, 7pjw:d, 7pjx:d, 7pjy:d, 7pjz:d, 8pkl:D, 8pva:D, 7q4k:AD, 8q4f:D, 6q97:i, 6q98:i, 6q9a:i, 7qg8:3, 7qgh:3, 7qgn:3, 7qgr:3, 8qk7:i, 8qoa:D, 8r3v:D1, 8r3v:D2, 8r6c:D, 8r8m:D, 8rcl:D1, 8rcl:D2, 8rcm:D1, 8rcm:D2, 8rcs:D1, 8rcs:D2, 8rct:D1, 8rct:D2, 7s1g:F, 7s1h:F, 7s1i:F, 7s1j:F, 7s1k:F, 7sa4:i, 7ss9:I, 7ssd:I, 7ssl:I, 7ssn:I, 7sso:I, 7ssw:I, 7st2:I, 7st6:I, 7st7:I, 8syl:d, 6szs:d, 8t5d:c, 8t5h:c, 6tbv:S041, 6tc3:S041, 7tos:S04, 6tqo:C, 4u1u:AD, 4u1u:CD, 4u1v:AD, 4u1v:CD, 4u20:AD, 4u20:CD, 4u24:AD, 4u24:CD, 4u25:AD, 4u25:CD, 4u26:AD, 4u26:CD, 4u27:AD, 4u27:CD, 5u4i:d, 5u4j:d, 5u9f:D, 5u9g:D, 7ug7:SD, 7uph:Y, 8upo:J, 8upr:J, 8uql:J, 8uqm:J, 8uqp:J, 8ur0:J, 8urh:J, 8uri:J, 8urx:J, 8ury:J, 5uyk:D, 5uyl:D, 5uym:D, 5uyn:D, 5uyp:D, 5uyq:D, 5uz4:D, 4v4h:AD, 4v4h:CD, 4v4q:AD, 4v4q:CD, 4v4v:AD, 4v4w:AD, 4v50:AD, 4v50:CD, 4v52:AD, 4v52:CD, 4v53:AD, 4v53:CD, 4v54:AD, 4v54:CD, 4v55:AD, 4v55:CD, 4v56:AD, 4v56:CD, 4v57:AD, 4v57:CD, 4v5b:BD, 4v5b:DD, 4v5h:AD, 4v5y:AD, 4v5y:CD, 4v64:AD, 4v64:CD, 4v65:AR, 4v66:AR, 4v69:AD, 4v6c:AD, 4v6c:CD, 4v6d:AD, 4v6d:CD, 4v6e:AD, 4v6e:CD, 4v6k:BH, 4v6l:AH, 4v6m:AD, 4v6n:BG, 4v6o:AG, 4v6p:AG, 4v6q:AG, 4v6r:AG, 4v6s:BF, 4v6t:AD, 4v6v:AD, 4v6y:AD, 4v6z:AD, 4v70:AD, 4v71:AD, 4v72:AD, 4v73:AD, 4v74:AD, 4v75:AD, 4v76:AD, 4v77:AD, 4v78:AD, 4v79:AD, 4v7a:AD, 4v7b:AD, 4v7c:AD, 4v7d:BD, 4v7i:BD, 4v7s:AD, 4v7s:CD, 4v7t:AD, 4v7t:CD, 4v7u:AD, 4v7u:CD, 4v7v:AD, 4v7v:CD, 4v85:AD, 4v89:AD, 4v9c:AD, 4v9c:CD, 4v9d:AD, 4v9d:BD, 4v9o:BD, 4v9o:DD, 4v9o:FD, 4v9o:HD, 4v9p:BD, 4v9p:DD, 4v9p:FD, 4v9p:HD, 8vs9:S04, 8vsa:S04, 6vu3:J, 6vwl:c, 6vwm:c, 6vwn:c, 6vyq:J, 6vyr:J, 6vys:J, 6vyt:J, 6vyu:J, 6vyw:J, 6vyx:J, 6vyy:J, 6vyz:J, 6vz2:J, 6vz3:J, 6vz5:J, 6vz7:J, 6vzj:J, 6w6k:D, 6w77:D, 6w7m:D, 6w7n:D, 6w7w:C, 5wdt:d, 6wd0:I, 6wd1:I, 6wd2:I, 6wd3:I, 6wd4:I, 6wd5:I, 6wd6:I, 6wd7:I, 6wd8:I, 6wd9:I, 6wda:I, 6wdb:I, 6wdc:I, 6wdd:I, 6wde:I, 6wdf:I, 6wdg:I, 6wdh:I, 6wdi:I, 6wdj:I, 6wdk:I, 6wdl:I, 6wdm:I, 5we4:d, 5we6:d, 4wf1:AD, 4wf1:CD, 5wf0:d, 5wfk:d, 5wfs:d, 6wnv:I, 6wnw:I, 4woi:AD, 4woi:DD, 4www:XD, 4www:QD, 6x6t:J, 6x7f:J, 6x7k:J, 6x9q:J, 6xdq:J, 6xdr:J, 6xe0:C, 6xgf:J, 6xii:J, 6xij:J, 6xza:D1, 6xzb:D1, 6y69:d, 7y7c:D, 7y7d:D, 7y7e:D, 7y7f:D, 7y7g:D, 7y7h:D, 4ybb:AD, 4ybb:BD, 2ykr:D, 6ysr:d, 6yss:d, 6yst:d, 6ysu:d, 6ztj:AD, 6ztl:AD, 6ztm:AD, 6ztn:AD, 6zto:AD, 6ztp:AD, 7zta:S041, 6zu1:AD
5 8jgw:A 500 44 0.1553 0.0320 0.3636 0.89
6 5my0:A 852 54 0.1456 0.0176 0.2778 2.4 5my0:C, 5my0:D, 5my2:D, 6rop:A, 6rop:C, 6rop:D
7 6rop:B 831 54 0.1456 0.0181 0.2778 2.5
8 4j1x:C 195 42 0.1456 0.0769 0.3571 2.6 2bnm:A, 2bnm:B, 2bnn:A, 2bnn:B, 2bno:A, 2bno:B, 4j1w:A, 4j1w:B, 4j1w:C, 4j1x:A, 4j1x:B, 3scf:A, 3scf:B, 3scf:C, 3scg:A, 3scg:B, 3scg:C, 3sch:A, 3sch:B, 1zz7:A, 1zz7:B, 1zz8:A, 1zz8:B, 1zz8:C, 1zz9:A, 1zz9:B, 1zz9:C, 1zzb:A, 1zzb:B, 1zzc:A, 1zzc:B
9 6dcr:B 600 54 0.1650 0.0283 0.3148 2.8
10 8fak:H 643 54 0.1650 0.0264 0.3148 3.2 2d7g:A, 2d7g:B, 2d7g:C, 2d7g:D, 2d7h:A, 6dcr:A, 2dwl:A, 2dwl:B, 2dwl:C, 2dwl:D, 2dwm:A, 2dwm:C, 2dwm:D, 2dwn:A, 2dwn:C
11 6q89:A 852 31 0.1165 0.0141 0.3871 6.1 7ntz:A, 7nu3:A, 7nu6:A, 7nu7:A, 7nub:A, 6q8b:A, 6q8c:A
12 7nu2:A 875 31 0.1165 0.0137 0.3871 6.2 7a0p:A, 7ap2:A, 7nty:A, 7nu0:A, 7nu1:A, 7nu4:A, 7nu5:A, 7nu8:A, 7nu9:A, 7nua:A, 7nuc:A, 6q8a:A, 6ykk:A, 6ykl:A, 6ykn:A, 6yko:A, 6ykq:A, 6yks:A, 6ykt:A, 6yku:A, 6ykv:A, 6ykw:A, 6ykx:A, 7yp8:A
13 7o81:AU 110 46 0.1165 0.1091 0.2609 6.9 6zvh:i
14 4hjf:A 263 34 0.0777 0.0304 0.2353 8.9 3u2e:A, 3u2e:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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