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BioLiP
>protein
SNAMTQLTREQVLELFHQRSSTRYYDPAKKISDEDFECILECGRLSPSSVGSEPWKFLVIQNKTLREKMKSFSWGMMNQL
DNCSHLVVILAKKNARYDSPFFEDVMVRKGLNAEQQQAALAKYKALQEEDMKLLESDRTLFDWCSKQTYIALANMLTGAA
ALGIDSCPIEGFHYDKMNECLAEEGLFDPKEYAVSVAATFGYRSRDIKKSRKALDEVVRWVE

The query sequence (length=222) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7s14:B 223 222 0.9595 0.9552 0.9595 9.38e-162 7ldq:A, 7rzl:A, 7rzl:B, 7rzp:A, 7rzp:B, 7s14:A, 7s14:C, 7s14:D, 7s1a:A, 7s1a:B, 7t2z:A, 7t2z:B, 7t33:A, 7t33:B
2 6wt2:A 221 220 0.5811 0.5837 0.5864 1.50e-91 6wt2:B, 6wt2:C, 6wt2:D
3 8qyg:B 225 218 0.4820 0.4756 0.4908 5.67e-77 8q5g:A, 8q5g:B, 8qyg:A
4 7jh4:A 223 216 0.4685 0.4664 0.4815 7.53e-72 7jh4:B, 7jh4:C, 7jh4:D, 7jh4:E
5 2hay:D 222 223 0.4414 0.4414 0.4395 3.91e-67 2hay:A, 2hay:B, 2hay:C
6 2h0u:A 196 211 0.4144 0.4694 0.4360 1.49e-48
7 1v5y:A 217 225 0.3333 0.3410 0.3289 5.97e-27 1v5y:B, 1v5z:A, 1v5z:B, 1vfr:A, 1vfr:B
8 3of4:A 208 176 0.2613 0.2788 0.3295 7.75e-19 3of4:B, 3of4:C
9 6czp:A 219 225 0.2793 0.2831 0.2756 3.10e-17 6czp:B, 6czp:C, 6czp:D, 6czp:E, 6czp:F, 6czp:G, 6czp:H, 7uwt:A, 7uwt:B
10 1ds7:A 217 204 0.2748 0.2811 0.2990 7.19e-17 8c5e:A, 8c5e:B, 8c5f:A, 8c5f:B, 8c5p:A, 8c5p:B, 8ccv:A, 8ccv:B, 8cj0:A, 8cj0:B, 1ds7:B, 1icr:A, 1icr:B, 1icu:A, 1icu:B, 1icu:C, 1icu:D, 1icv:A, 1icv:B, 1icv:C, 1icv:D, 1idt:A, 1idt:B, 8og3:A, 8og3:B, 1oo5:A, 1oo5:B, 1oo6:A, 1oo6:B, 1oon:A, 1oon:B, 1ooq:A, 1ooq:B, 8qes:A, 8qes:C, 8qes:B, 8qes:D, 8qpo:A, 8qpo:B, 8qpo:C, 8qpo:G, 8qpo:D, 8qpo:E, 8qpo:F, 8qpo:H, 3x21:A, 3x21:B, 3x21:C, 3x21:D, 3x21:E, 3x21:F, 3x21:G, 3x21:H, 3x21:I, 3x21:J, 3x22:A, 3x22:B, 7x32:A, 7x32:C, 7x32:B, 7x32:H, 7x32:D, 7x32:F, 7x32:E, 7x32:G, 7xww:B, 7xww:A, 7xww:H, 7xww:I, 1yki:A, 1yki:B, 1yki:C, 1yki:D, 1ylr:A, 1ylr:B, 1ylu:A, 1ylu:B
11 5j8d:A 216 224 0.2838 0.2917 0.2812 2.21e-16 5j8d:B, 5j8d:C, 5j8d:D, 5j8g:A, 5j8g:B, 5j8g:C, 5j8g:D, 1kqb:A, 1kqb:B, 1kqb:C, 1kqb:D, 1kqc:A, 1kqc:B, 1kqc:C, 1kqc:D, 1kqd:A, 1kqd:B, 1kqd:C, 1kqd:D, 1nec:A, 1nec:B, 1nec:C, 1nec:D
12 3qdl:A 178 219 0.2523 0.3146 0.2557 3.73e-15 3qdl:B, 3qdl:C, 3qdl:D
13 3gbh:B 213 224 0.2793 0.2911 0.2768 6.58e-14 3gbh:A, 3gbh:C, 3gbh:D
14 8dor:A 217 178 0.2072 0.2120 0.2584 2.04e-13 8dor:B, 8dor:C, 8dor:D
15 3ge6:A 210 185 0.2387 0.2524 0.2865 6.64e-13 3ge6:B
16 3gag:A 206 183 0.2072 0.2233 0.2514 1.81e-11 3gag:B, 3gag:C, 3gag:D
17 8cqt:B 164 80 0.1306 0.1768 0.3625 3.11e-10 8cqt:A
18 4eo3:A 321 203 0.1982 0.1371 0.2167 1.25e-08 4eo3:B
19 2b67:A 201 220 0.2477 0.2736 0.2500 1.96e-08 2b67:B, 2b67:C, 2b67:D
20 3bem:B 210 213 0.2072 0.2190 0.2160 1.24e-07 3bem:A
21 4qlx:A 217 210 0.2207 0.2258 0.2333 3.56e-07 4qlx:B, 4qly:A, 4qly:B, 4qly:C, 4qly:D
22 3gfa:A 197 210 0.2162 0.2437 0.2286 1.93e-06 3gfa:B
23 1nox:A 200 210 0.2387 0.2650 0.2524 2.50e-05
24 3e39:A 175 54 0.0991 0.1257 0.4074 7.94e-05 3e39:B
25 5j62:B 209 73 0.0856 0.0909 0.2603 9.08e-05 5j62:A
26 3ek3:A 187 159 0.1757 0.2086 0.2453 1.07e-04
27 3ge5:A 176 60 0.0856 0.1080 0.3167 2.02e-04 3ge5:B
28 4dn2:A 191 218 0.2117 0.2461 0.2156 6.26e-04 4dn2:B
29 3tnz:A 222 61 0.0676 0.0676 0.2459 0.001 3gfd:A, 3gfd:B, 3gh8:A, 3gh8:B, 3gh8:C, 3gh8:D, 3gh8:E, 3gh8:F, 3gh8:G, 3gh8:H, 3tnz:B
30 4ttb:A 189 57 0.0631 0.0741 0.2456 0.009 4ttb:B
31 4ttc:A 220 61 0.0631 0.0636 0.2295 0.010 4ttc:B, 4ttc:C, 4ttc:D, 4ttc:E, 4ttc:F, 5yak:A, 5yak:F, 5yak:B, 5yak:C, 5yak:D, 5yak:E
32 7vqk:A 195 211 0.2072 0.2359 0.2180 0.013 7vqk:B
33 3gb5:A 185 54 0.0631 0.0757 0.2593 0.015 3to0:A, 3to0:B
34 4g8s:A 182 211 0.2117 0.2582 0.2227 0.016 4g8s:B
35 3m5k:A 168 59 0.0721 0.0952 0.2712 0.020 3m5k:B
36 5j6c:A 173 86 0.1171 0.1503 0.3023 0.039 5j6c:B
37 3e10:B 167 79 0.1036 0.1377 0.2911 0.085 3e10:A
38 8uc3:A 180 64 0.0631 0.0778 0.2188 0.12 8uc3:B
39 3kwk:A 168 64 0.0766 0.1012 0.2656 0.16
40 3eo8:A 219 52 0.0721 0.0731 0.3077 0.24 3eo8:B, 3eo8:C, 3eo8:D, 3eo8:E, 3eo8:F
41 2fre:A 200 58 0.0721 0.0800 0.2759 0.25 2fre:B
42 6pz0:A 185 57 0.0631 0.0757 0.2456 0.31 6pz0:B, 6q1b:A, 6q1b:B, 6q1l:A, 6q1l:B, 6tyk:A, 6tyk:B
43 5ko7:B 200 54 0.0586 0.0650 0.2407 0.41
44 5ko8:B 218 54 0.0586 0.0596 0.2407 0.46 5ko7:A, 5ko8:A, 5krd:A, 5krd:B
45 1zch:A 249 66 0.0721 0.0643 0.2424 1.1
46 7wfx:A 493 135 0.1261 0.0568 0.2074 3.7 7wfx:B, 7wg1:A, 7wg1:B, 7wg2:A, 7wg4:A
47 3gr3:A 226 55 0.0631 0.0619 0.2545 5.9 3gr3:B
48 5o6m:D 264 78 0.0811 0.0682 0.2308 7.5 5lc9:B, 5lc9:C, 5lc9:D, 5lcd:A, 5lcd:B, 5lcd:C, 5lcd:D, 5ld1:A, 5ld1:D, 5ld1:B, 5ld1:C, 5ldb:A, 5ldb:B, 5ldb:C, 5ldb:D, 5maq:A, 5maq:B, 5maq:C, 5maq:D, 5o6k:A, 5o6k:B, 5o6k:C, 5o6k:D, 5o6m:A, 5o6m:B, 5o6m:C
49 7f2j:A 117 46 0.0586 0.1111 0.2826 8.4 7f2j:B, 6j2m:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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