BioLiP

>protein
SMFKKYSSLENHYNSKFIEKLYSLGLTGGEWVAREKIHGTNFSLIIERDKVTCAKRTGPILPAEDFFGYEIILKNYADSI
KAVQDIMETSAVVSYQVFGEFAGPGIQKNVDYGDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTFKFKMAPLLGRGKFE
ELIKLPNDLDSVVQDYNFTVDHAGLVDANKCVWNAEAKGEVFTAEGYVLKPCYPSWLRNGNRVAIKCKNSKLSEADNKLV
GILACYVTLNRVNNVISKIGEIGPKDFGKVMGLTVQDILEETSREGITLTQADNPSLIKKELVKMVQDVLRPAWIELVS

The query sequence (length=319) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	2hvr:A	319	319	0.9937	0.9937	0.9937	0.0	2hvq:A, 2hvr:B, 2hvs:A, 2hvs:B, 1s68:A
2	1xdn:A	265	75	0.0909	0.1094	0.3867	2.98e-11
3	7bkp:A	689	54	0.0596	0.0276	0.3519	0.38	6g19:A, 6gjz:A, 6gkh:A, 6gkm:A, 6h66:A, 7nic:A, 7niq:B
4	8tua:A	1329	113	0.0909	0.0218	0.2566	0.53	5d3x:A, 5d3x:B, 5d3y:A, 5d3y:B, 5fi0:A, 5fi0:C, 5fi0:E, 5fi0:G
5	4lb5:B	63	41	0.0470	0.2381	0.3659	0.95	4lb5:A, 4lb6:B
6	3l86:A	245	140	0.1034	0.1347	0.2357	1.1
7	7zbo:A	348	55	0.0564	0.0517	0.3273	2.5	7r09:A, 7zbo:B, 7zbo:C, 7zbo:D
8	4fee:A	586	24	0.0376	0.0205	0.5000	2.8	2ez4:A, 2ez4:B, 2ez8:A, 2ez8:B, 2ez9:A, 2ez9:B, 2ezt:A, 2ezt:B, 2ezu:A, 2ezu:B, 4fee:B, 4feg:A, 4feg:B, 6haf:A, 6haf:B, 4kgd:A, 4kgd:B, 1pow:A, 1pow:B, 1pox:A, 1pox:B, 1y9d:B
9	1qho:A	686	25	0.0313	0.0146	0.4000	2.9	1qhp:A
10	6r1n:A	420	33	0.0502	0.0381	0.4848	3.5
11	3ea0:B	242	136	0.0940	0.1240	0.2206	4.1	3ea0:A
12	8gym:b4	115	39	0.0376	0.1043	0.3077	5.7	8gym:B4, 8gzu:b4, 8gzu:B4
13	1y9d:D	560	35	0.0408	0.0232	0.3714	8.6	1y9d:A, 1y9d:C

[Back]