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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
SLWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGVEKLRIEHQTITTPSKKK
IEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRL
ILCCNSTSKVIPPIRSRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFT
ADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHR
LQLGSKAIYHLEAFVAKFMALYKKFMED

The query sequence (length=348) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8ui7:E 348 348 1.0000 1.0000 1.0000 0.0 8ui8:E, 8ui9:E, 8uii:E, 8umt:E, 8umu:E, 8umv:E, 8umw:E, 8umy:E, 8un0:E, 8unj:E, 6vvo:E, 7z6h:E
2 8dqw:E 354 349 0.4397 0.4322 0.4384 2.72e-98 8dqx:E, 8dqz:E, 8dr0:E, 8dr1:E, 8dr3:E, 8dr4:E, 8dr5:E, 8dr6:E, 8dr7:E, 8fs3:E, 8fs4:E, 8fs5:E, 8fs6:E, 8fs7:E, 7sgz:E, 7sh2:E, 7st9:E, 7stb:E, 7ste:E, 7tfh:E, 7tfi:E, 7tfj:E, 7tfk:E, 7tfl:E, 7thj:E, 7thv:E, 8thb:E, 8thc:E, 8thd:E, 7ti8:E, 7tib:E, 7tic:E, 7tid:E, 7tku:E, 8tw7:5, 8tw8:5, 8twa:5, 8twb:5, 7u19:E, 7u1a:E, 7u1p:E
3 8fs8:E 332 344 0.4282 0.4488 0.4331 1.39e-91 1sxj:E
4 1iqp:A 326 356 0.3161 0.3374 0.3090 9.65e-38 1iqp:B, 1iqp:C, 1iqp:E
5 2chq:A 313 350 0.2874 0.3195 0.2857 1.91e-32 2chg:A, 2chg:B, 2chg:C, 2chg:D, 2chq:B, 2chq:C
6 8dr0:D 344 244 0.2126 0.2151 0.3033 7.93e-30 8dqw:D, 8dqx:D, 8dqz:D, 8dr1:D, 8dr3:D, 8dr4:D, 8dr5:D, 8dr6:D, 8dr7:D, 8fs3:D, 8fs4:D, 8fs5:D, 8fs6:D, 8fs7:D, 8fs8:D, 7sgz:D, 7sh2:D, 7st9:D, 7stb:D, 7ste:D, 1sxj:D, 7tfh:D, 7tfi:D, 7tfj:D, 7tfk:D, 7tfl:D, 7thj:D, 7thv:D, 8thb:D, 8thc:D, 8thd:D, 7ti8:D, 7tib:D, 7tic:D, 7tid:D, 7tku:D, 8tw7:2, 8tw8:2, 8twa:2, 8twb:2, 7u19:D, 7u1a:D, 7u1p:D
7 8umv:D 329 252 0.2356 0.2492 0.3254 2.36e-29 8ui7:D, 8ui8:D, 8ui9:D, 8uii:D, 8umt:D, 8umw:D, 8umy:D, 8un0:D, 8unj:D, 6vvo:D, 7z6h:D
8 8dqx:C 330 232 0.2126 0.2242 0.3190 8.09e-29 8dqw:C, 8dqz:C, 8dr0:C, 8dr1:C, 8dr3:C, 8dr4:C, 8dr5:C, 8dr6:C, 8dr7:C, 8fs3:C, 8fs4:C, 8fs5:C, 8fs6:C, 8fs7:C, 8fs8:C, 7sgz:C, 7sh2:C, 7st9:C, 7stb:C, 7ste:C, 1sxj:C, 7tfh:C, 7tfi:C, 7tfj:C, 7tfk:C, 7tfl:C, 7thj:C, 7thv:C, 8thb:C, 8thc:C, 8thd:C, 7ti8:C, 7tib:C, 7tic:C, 7tid:C, 7tku:C, 8tw7:3, 8tw8:3, 8twa:3, 8twb:3, 7u19:C, 7u1a:C, 7u1p:C
9 8ui7:C 339 232 0.2011 0.2065 0.3017 1.11e-27 8ui8:C, 8ui9:C, 8uii:C, 8umt:C, 8umu:C, 8umv:C, 8umw:C, 8umy:C, 8un0:C, 8unj:C, 6vvo:C, 7z6h:G
10 8ui7:B 319 200 0.1925 0.2100 0.3350 2.28e-26 8ui8:B, 8ui9:B, 8uii:B, 8umt:B, 8umu:B, 8umv:B, 8umw:B, 8umy:B, 8un0:B, 8unj:B, 6vvo:B, 7z6h:F
11 7tfh:B 320 200 0.1868 0.2031 0.3250 1.00e-24 8dqw:B, 8dqx:B, 8dqz:B, 8dr0:B, 8dr1:B, 8dr3:B, 8dr4:B, 8dr5:B, 8dr6:B, 8dr7:B, 8fs3:B, 8fs4:B, 8fs5:B, 8fs6:B, 8fs7:B, 8fs8:B, 7sgz:B, 7sh2:B, 7st9:B, 7stb:B, 7ste:B, 1sxj:B, 7tfi:B, 7tfj:B, 7tfk:B, 7tfl:B, 7thj:B, 7thv:B, 8thb:B, 8thc:B, 8thd:B, 7ti8:B, 7tib:B, 7tic:B, 7tid:B, 7tku:B, 8tw7:4, 8tw8:4, 8twa:4, 8twb:4, 7u19:B, 7u1a:B, 7u1p:B
12 3u5z:B 320 233 0.1494 0.1625 0.2232 1.01e-08 3u5z:C, 3u5z:D, 3u5z:E, 3u5z:L, 3u5z:M, 3u5z:N, 3u5z:O, 3u60:B, 3u60:C, 3u60:D, 3u60:E, 3u61:C, 3u61:D, 3u61:E, 3u61:B, 8uh7:B, 8uh7:C, 8uh7:D, 8uh7:E, 8uk9:B, 8uk9:C, 8uk9:D, 8uk9:E, 8uk9:K, 8uk9:L, 8uk9:M, 8uk9:N, 8unf:E, 8unf:D, 8unf:C, 8unf:B, 8unh:B, 8unh:E
13 6vvo:A 448 266 0.1638 0.1272 0.2143 3.72e-08
14 3glf:G 378 103 0.0862 0.0794 0.2913 1.06e-04 8giy:B, 8giy:C, 8giy:D, 8giz:B, 8giz:C, 8giz:D, 8gj0:B, 8gj0:C, 8gj0:D, 8gj1:B, 8gj1:C, 8gj1:D, 8gj2:B, 8gj2:C, 8gj2:D, 8gj3:B, 8gj3:C, 8gj3:D, 3glf:B, 3glf:C, 3glf:D, 3glf:H, 3glf:I, 3glg:B, 3glg:C, 3glg:D, 3glg:G, 3glg:H, 3glg:I, 3gli:B, 3gli:C, 3gli:D, 3gli:G, 3gli:H, 3gli:I, 1jr3:A, 1jr3:B, 1jr3:C, 1njf:A, 1njf:B, 1njf:C, 1njf:D, 1njg:A, 1njg:B, 8val:B, 8val:C, 8val:D, 8vam:B, 8vam:C, 8vam:D, 8vap:B, 8vap:C, 8vap:D, 8vaq:B, 8vaq:C, 8vaq:D, 8var:B, 8var:C, 8var:D, 8vas:B, 8vas:C, 8vas:D, 8vat:B, 8vat:C, 8vat:D, 1xxh:B, 1xxh:C, 1xxh:D, 1xxh:G, 1xxh:H, 1xxh:I, 1xxi:B, 1xxi:C, 1xxi:D, 1xxi:G, 1xxi:H, 1xxi:I
15 8dr5:A 646 244 0.1437 0.0774 0.2049 0.005 8dqx:A, 8dqz:A, 8dr0:A, 8dr1:A, 8dr3:A, 8dr4:A, 8dr6:A, 8dr7:A, 1sxj:A, 7tfh:A, 7tfi:A, 7tfj:A, 7thj:A, 7thv:A, 7ti8:A, 7tib:A, 7tic:A, 7tid:A, 7tku:A, 7u19:A, 7u1a:A, 7u1p:A
16 7z6h:K 439 180 0.1149 0.0911 0.2222 0.018
17 8btg:B 335 154 0.0891 0.0925 0.2013 0.27 8btg:A, 8btg:C, 8btg:D, 8btg:E, 8btg:F, 8btg:G, 8bv3:A, 8bv3:B, 8bv3:C, 8bv3:D, 8bv3:E
18 6z4w:A 230 30 0.0431 0.0652 0.5000 0.31 6z63:A, 6z63:B, 6z63:C, 6z67:C, 6z67:B, 6z67:E
19 8dqw:A 522 87 0.0661 0.0441 0.2644 0.31 8fs3:A, 8fs5:A, 8fs6:A, 8fs7:A, 8fs8:A, 7sgz:A, 7st9:A, 7stb:A
20 8ipr:A 504 28 0.0431 0.0298 0.5357 0.48 8ipr:D
21 6qdj:A 758 50 0.0460 0.0211 0.3200 0.56
22 7ste:A 468 70 0.0575 0.0427 0.2857 0.59 8fs4:A, 7sh2:A
23 7tfk:A 360 74 0.0575 0.0556 0.2703 1.5 7tfl:A
24 7tfk:A 360 108 0.0718 0.0694 0.2315 2.4 7tfl:A
25 7dnz:A 591 62 0.0575 0.0338 0.3226 1.6 7dny:A, 7dny:B, 7dnz:B, 7ekl:A, 7ekl:B, 8k7b:A, 8k7b:B, 8k7c:A, 8k7c:B, 3nh9:A, 3nha:A, 3nhb:A, 8yr3:A, 8yr3:B, 8yr4:B, 8yr4:A
26 7p7q:0 534 28 0.0374 0.0243 0.4643 1.9 7p7r:0, 7p7s:0, 7p7t:0
27 6o1x:A 354 56 0.0460 0.0452 0.2857 3.4 6o1w:A, 6o1w:B, 6o1y:A
28 8i3a:A 562 70 0.0575 0.0356 0.2857 3.6 8i39:A, 8i39:B, 8i3a:B, 8i3b:A, 8i3b:B, 8i3c:A, 8i3c:B, 8iwn:A, 8iwn:C, 8wam:A, 8wam:B, 8wba:A, 8wba:B
29 4jc0:A 424 46 0.0489 0.0401 0.3696 4.0 4jc0:B
30 8thc:A 479 66 0.0431 0.0313 0.2273 4.3 8thb:A, 8thd:A
31 5e7p:A 719 51 0.0603 0.0292 0.4118 4.5 5e7p:B
32 8dzg:A 420 87 0.0690 0.0571 0.2759 4.5 8dze:A, 8dze:B, 8dze:C, 8dze:D, 8dze:E, 8dze:F, 8dzf:A, 8dzf:B, 8dzf:C, 8dzf:D, 8dzf:E, 8dzf:F, 8dzg:B, 8dzg:C, 8dzg:D, 8dzg:E, 8dzg:F
33 7cfn:R 274 57 0.0575 0.0730 0.3509 5.8 7cfm:R, 7xtq:R
34 2qor:A 196 58 0.0546 0.0969 0.3276 6.2
35 7jgr:D 441 80 0.0632 0.0499 0.2750 7.0 7jgs:D, 7jk2:D, 7jk3:D, 7jk4:D, 7jk5:D, 7jk6:D
36 2yfn:A 719 117 0.0747 0.0362 0.2222 9.6 2yfo:A
37 7x5b:A 312 185 0.1006 0.1122 0.1892 9.6 6blb:A, 7x7p:M, 7x7p:P, 7x7q:M, 7x7q:P

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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