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BioLiP
>protein
SLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVEEE

The query sequence (length=77) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4wzj:MM 80 77 1.0000 0.9625 1.0000 2.15e-52 7abg:b, 7abi:b, 6ahd:Q, 6ahd:d, 7b0y:f, 8c6j:q, 8c6j:f, 8ch6:h, 8ch6:2, 7dvq:f, 7dvq:m, 9fmd:m, 9fmd:f, 8h6e:5d, 8h6e:4d, 8h6j:5d, 8h6j:4d, 8h6k:5d, 8h6k:4d, 8h6l:5d, 8h6l:4d, 8i0p:d, 8i0r:d, 8i0s:d, 8i0s:i, 8i0t:d, 8i0t:i, 8i0u:d, 8i0u:i, 8i0v:d, 8i0v:i, 8i0w:d, 8i0w:m, 6id1:f, 5mqf:i, 5mqf:b, 5o9z:i, 4pjo:F, 4pjo:f, 4pjo:T, 4pjo:t, 8q7q:f, 8q7v:f, 8q7w:f, 8q7x:f, 8q91:m, 6qdv:q, 6qdv:f, 8qo9:2f, 8qo9:5f, 8qo9:4f, 7qtt:h, 6qw6:4f, 6qw6:5f, 6qx9:1f, 6qx9:5f, 6qx9:2f, 6qx9:4f, 8qxd:2f, 8qxd:4f, 8qxd:5f, 8qzs:5f, 8qzs:2f, 8qzs:4f, 8r08:1f, 8r08:2f, 8r08:4f, 8r08:5f, 8r09:2f, 8r09:5f, 8r09:4f, 8r0a:5f, 8r0a:2f, 8r0a:4f, 8r0b:2f, 8r0b:4f, 8r0b:5f, 8rc0:m, 8rm5:2f, 8rm5:5f, 8rm5:4f, 8ro2:f, 6v4x:F, 7vpx:m, 7w59:f, 7w59:m, 7w5a:f, 7w5a:m, 7w5b:f, 7w5b:m, 4wzj:F, 4wzj:M, 4wzj:T, 4wzj:FF, 4wzj:TT, 4wzj:FFF, 4wzj:MMM, 4wzj:TTT, 4wzj:FFFF, 4wzj:MMMM, 4wzj:TTTT, 5xjc:f, 5xjc:m, 8y6o:f, 8y6o:m, 8y6o:t, 8y7e:m, 5yzg:f, 5yzg:m, 5z56:m, 5z57:m, 5z58:m
2 8ro0:f 72 71 0.6883 0.7361 0.7465 5.30e-35 8ro1:f
3 3jb9:I 73 70 0.6234 0.6575 0.6857 8.41e-33 3jb9:n
4 7b9v:q 75 71 0.5455 0.5600 0.5915 3.16e-24 7b9v:f, 6bk8:b, 7dco:j, 6exn:q, 6exn:f, 6g90:f, 6g90:x, 5gam:f, 5gan:q, 5gan:f, 5gao:q, 5gm6:h, 5gmk:h, 5gmk:w, 6j6g:h, 6j6g:w, 6j6h:h, 6j6h:w, 6j6n:h, 6j6n:w, 6j6q:h, 6j6q:w, 5lj3:f, 5lj5:f, 5mps:f, 5mq0:f, 6n7p:P, 6n7r:P, 6n7x:P, 5nrl:x, 5nrl:q, 5nrl:f, 7oqc:f, 8w2o:P, 5wsg:h, 5wsg:H, 5y88:c, 5y88:j, 5ylz:c, 5ylz:j, 5zwm:U, 5zwm:j, 5zwn:f, 5zwo:U, 5zwo:j
5 6qw6:66 72 66 0.4416 0.4722 0.5152 6.12e-20 6qx9:66
6 6ppq:F 71 70 0.4156 0.4507 0.4571 2.24e-18 6ppn:F, 6ppn:N, 6ppp:F, 6ppp:N, 6ppv:F
7 1loj:C 77 55 0.3377 0.3377 0.4727 5.67e-12 1loj:A, 1loj:B, 1loj:D, 1loj:E, 1loj:F, 1loj:G, 1loj:H, 1loj:I, 1loj:J, 1loj:K, 1loj:L, 1loj:M, 1loj:N
8 1i5l:C 74 70 0.3247 0.3378 0.3571 9.58e-10 1i5l:E, 1i5l:F, 1i5l:G, 1i5l:J, 1i5l:K, 1i5l:L, 1i5l:A, 1i5l:B, 1i5l:H
9 6ppn:D 88 72 0.3506 0.3068 0.3750 3.38e-09 6ppn:L, 6ppp:D, 6ppp:L, 6ppq:D, 6ppv:D
10 1m8v:A 72 67 0.3117 0.3333 0.3582 2.15e-08 1m8v:M, 1m8v:C, 1m8v:K, 1m8v:F, 1m8v:H, 1m8v:E, 1m8v:I, 1m8v:D, 1m8v:J, 1m8v:B, 1m8v:L, 1m8v:G, 1m8v:N
11 5vsu:F 77 70 0.3247 0.3247 0.3571 4.18e-08 6aso:F
12 1lnx:A 74 62 0.3247 0.3378 0.4032 1.09e-07 1lnx:B, 1lnx:C, 1lnx:D, 1lnx:E, 1lnx:F, 1lnx:G
13 6qw6:64 73 75 0.3377 0.3562 0.3467 3.39e-05 6qx9:64
14 5vsu:B 98 67 0.3247 0.2551 0.3731 3.67e-05 6aso:B, 5gan:2, 4m7a:I, 4m7a:B, 4m7d:I, 4m7d:B, 5nrl:a
15 5gan:4 74 67 0.2857 0.2973 0.3284 1.06e-04 4m7a:N, 4m7a:G, 4m7d:N, 5nrl:j, 5vsu:D
16 6ppn:B 94 66 0.2857 0.2340 0.3333 4.99e-04 6ppn:J, 6ppp:B, 6ppp:J, 6ppq:B, 6ppv:B
17 6g90:d 93 66 0.2338 0.1935 0.2727 0.001 7b9v:n, 7b9v:d, 6bk8:o, 6bk8:g, 7dco:l, 6exn:n, 6exn:d, 6g90:v, 5gam:d, 5gan:n, 5gan:d, 5gao:n, 5gm6:l, 5gmk:l, 5gmk:y, 6j6g:l, 6j6g:y, 6j6h:l, 6j6h:y, 6j6n:l, 6j6n:y, 6j6q:l, 6j6q:y, 3jcm:J, 3jcm:R, 5lj3:d, 5lj3:n, 5lj5:d, 5lj5:n, 5mps:d, 5mq0:n, 5mq0:d, 6n7p:N, 6n7r:N, 6n7x:N, 5nrl:v, 5nrl:n, 5nrl:d, 7oqb:v, 7oqc:d, 7oqe:d, 7oqe:v, 8w2o:N, 5wsg:l, 5wsg:U, 5y88:e, 5y88:l, 5ylz:e, 5ylz:l, 5zwm:S, 5zwm:d, 5zwm:l, 5zwn:d, 5zwo:d, 5zwo:S
18 6aso:D 59 49 0.2208 0.2881 0.3469 0.001
19 6qw6:62 95 37 0.2078 0.1684 0.4324 0.002 6ahd:q, 8h6e:6a, 8h6j:6a, 8h6k:6a, 8h6l:6a, 6qx9:62
20 3jb9:F 82 62 0.2727 0.2561 0.3387 0.003 3jb9:f
21 3jb9:D 96 63 0.2078 0.1667 0.2540 0.012 3jb9:Z
22 8ro0:a 81 66 0.2597 0.2469 0.3030 0.016 8ro1:a
23 3jb9:E 98 30 0.1558 0.1224 0.4000 0.026 3jb9:b
24 8ro0:n 77 64 0.2597 0.2597 0.3125 0.077 8ro0:g, 8ro1:g
25 6v4x:C 114 66 0.2727 0.1842 0.3182 0.15
26 7b0n:G 694 32 0.1948 0.0216 0.4688 0.21 6gcs:A, 7o6y:A, 7o71:A, 6rfq:A, 6rfr:A, 6rfs:A, 6y79:A, 6yj4:G
27 3swn:A 76 44 0.1818 0.1842 0.3182 0.23 6ppq:E, 6ppv:E, 3swn:D, 3swn:P, 3swn:S
28 8ro0:b 98 50 0.1948 0.1531 0.3000 0.29 8ro1:b
29 6tfl:A 62 57 0.2208 0.2742 0.2982 0.33 6tfl:B, 6tfl:C, 6tfl:D, 6tfl:E, 6tfl:F, 6tfl:G, 6tfl:H, 6tfl:I, 6tfl:J, 6tfl:K, 6tfl:L, 6tfl:M, 6tfl:N
30 7abg:j 81 51 0.1818 0.1728 0.2745 0.44 7a5p:j, 7a5p:e, 7abi:j, 6ah0:c, 6ahd:e, 7b0y:g, 8c6j:p, 8c6j:e, 8ch6:i, 8ch6:1, 7dvq:e, 7dvq:l, 9fmd:l, 9fmd:e, 8h6e:5e, 8h6e:4e, 8h6j:5e, 8h6j:4e, 8h6k:5e, 8h6l:5e, 8i0p:e, 8i0p:j, 8i0r:e, 8i0r:j, 8i0s:e, 8i0s:j, 8i0t:e, 8i0t:j, 8i0u:e, 8i0u:j, 8i0v:e, 8i0v:j, 8i0w:e, 8i0w:l, 6icz:e, 6id0:e, 6id1:e, 5mqf:j, 5mqf:c, 5o9z:j, 4pjo:E, 4pjo:e, 4pjo:S, 4pjo:s, 8q7q:e, 8q7v:e, 8q7w:e, 8q7x:e, 6qdv:p, 6qdv:e, 8qo9:2e, 8qo9:5e, 8qo9:4e, 7qtt:i, 6qw6:4e, 6qw6:5e, 6qx9:1e, 6qx9:5e, 6qx9:2e, 6qx9:4e, 8qxd:2e, 8qxd:4e, 8qzs:5e, 8qzs:2e, 8qzs:4e, 8r08:1e, 8r08:2e, 8r08:4e, 8r09:2e, 8r09:5e, 8r09:4e, 8r0a:5e, 8r0a:2e, 8r0a:4e, 8r0b:4e, 8r0b:5e, 8rm5:2e, 8rm5:5e, 8rm5:4e, 8ro2:e, 6v4x:E, 7vpx:l, 7w59:e, 7w59:l, 7w5a:e, 7w5a:l, 7w5b:e, 7w5b:l, 4wzj:E, 4wzj:L, 4wzj:S, 4wzj:EE, 4wzj:LL, 4wzj:SS, 4wzj:EEE, 4wzj:LLL, 4wzj:SSS, 4wzj:EEEE, 4wzj:LLLL, 4wzj:SSSS, 5xjc:e, 5xjc:l, 8y6o:e, 8y6o:l, 8y6o:s, 8y7e:l, 5yzg:e, 5yzg:l, 5z56:e, 5z56:l, 5z57:e, 5z57:l, 5z58:e, 5z58:l
31 6ppn:C 75 59 0.2208 0.2267 0.2881 0.51 6ppn:K, 6ppp:C, 6ppp:K, 6ppq:C, 6ppv:C
32 8ro0:e 80 51 0.1688 0.1625 0.2549 0.76 8ro1:e
33 6qw6:63 85 33 0.1429 0.1294 0.3333 2.0 6ah0:r, 6qx9:63, 8qxd:63, 8r08:63, 8r09:63, 8r0a:63, 8r0b:63, 8rm5:63
34 6v4x:B 76 48 0.1818 0.1842 0.2917 2.5
35 1kij:A 384 32 0.1429 0.0286 0.3438 4.7 6enh:A, 1kij:B
36 5chc:A 895 17 0.1299 0.0112 0.5882 5.6 5ch7:A, 5ch7:C, 5ch7:E, 5chc:C, 5chc:E, 5e7o:A, 5e7o:C, 5e7o:E, 5e7o:G, 5e7o:I, 5e7o:K, 4ydd:A, 4ydd:C, 4ydd:E
37 1anw:A 319 55 0.2208 0.0533 0.3091 6.4 1a8a:A, 1a8b:A, 1anw:B, 1anx:A, 1anx:B, 1anx:C, 1avh:A, 1avh:B, 1avr:A, 1bc0:A, 1bc1:A, 1bc3:A, 1bcw:A, 1bcy:A, 1bcz:A, 1g5n:A, 8gyc:B, 8h0j:A, 8h9z:A, 1hak:B, 1hak:A, 1hvd:A, 1hve:A, 1hvf:A, 6k22:A, 1sav:A, 2xo2:A, 2xo3:A
38 1yj0:A 317 26 0.1429 0.0347 0.4231 7.5 1ala:A, 1yii:A
39 5o1n:A 442 26 0.1169 0.0204 0.3462 8.7 5l78:A, 5l78:B, 5o1o:A, 5o1o:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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