BioLiP

>protein
SLIKNPILRGFNPDPSICRADTDYYIATSTFEWFPGVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIWAPDLSYH
DGKFWLIYTDVKVTDGMWKDCHNYLTTCESVDGVWSDPITLNGSGFDASLFHDNDGKKYLVNMYWDQRTYNHNFYGIVLQ
EYSDKEKKLIGKAKIIYKGTDIKYTEGPHIYHIGDYYYLFTAEGGTTYEHSETVARSKNIDGPYEIDPEYPLLTSWHDPR
NSLQKCGHASLVHTHTDEWYLAHLVGRPLPVGNQPVLEQRGYCPLGRETSIQRIEWVDNWPRVVGGKQGSVNVEAPKIPE
VKWEKTYDEKDNFDSDKLNINFQSLRIPLTENIASLKAKKGNLRLYGKESLTSTFTQAFIARRWQSFKFDASTSVSFSPD
TFQQAAGLTCYYNTENWSTIQVTWNEDKGRVIDIVCCDNFHFDMPLKSNVIPIPKDVEYIHLKVEVRVETYQYSYSFDGI
NWSKVPAIFESRKLSDDYVQGGGFFTGAFVGINCIDITGNNKPADFDYFCYKEE

The query sequence (length=534) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	1y7b:A	534	534	1.0000	1.0000	1.0000	0.0	1y7b:B, 1y7b:C, 1y7b:D, 1yi7:A, 1yi7:B, 1yi7:C, 1yi7:D
2	2exh:A	533	531	0.6629	0.6642	0.6667	0.0	2exh:B, 2exh:C, 2exh:D, 2exi:A, 2exi:B, 2exi:C, 2exi:D, 2exj:A, 2exj:B, 2exj:C, 2exj:D, 2exk:A, 2exk:B, 2exk:C, 2exk:D
3	5zqx:A	536	531	0.6049	0.6026	0.6083	0.0	5zqs:A, 5zqs:B, 5zqx:B, 5zqx:C, 5zqx:D
4	7k1r:A	536	532	0.5356	0.5336	0.5376	0.0	7k1r:B, 7k1r:C, 7k1r:D, 8uws:C, 8uws:D, 8uws:A, 8uws:B
5	6ms3:A	512	537	0.3427	0.3574	0.3408	3.16e-83	6ms2:A, 6ms3:B
6	5z5d:A	504	542	0.3464	0.3671	0.3413	1.52e-80	5z5f:A, 5z5h:A, 5z5i:A
7	5joz:A	507	548	0.3333	0.3511	0.3248	1.02e-78	5joz:B
8	5jox:A	502	536	0.3258	0.3466	0.3246	1.21e-71	5jox:B, 5joy:A, 5joy:B
9	3zxk:A	530	407	0.1948	0.1962	0.2555	3.11e-10	3zxk:B
10	4kc8:A	449	255	0.1273	0.1514	0.2667	6.47e-07
11	1uv4:A	291	234	0.1049	0.1924	0.2393	2.06e-06
12	3lv4:A	441	253	0.1292	0.1565	0.2727	3.41e-06	3lv4:B
13	1gye:B	315	241	0.1161	0.1968	0.2573	4.96e-06
14	5msx:C	440	150	0.0805	0.0977	0.2867	1.75e-05	5msx:A, 5msx:B
15	6b7k:A	290	230	0.1086	0.2000	0.2522	4.49e-05	6b7k:B, 6b7k:C, 6b7k:D
16	6a8i:A	318	239	0.0993	0.1667	0.2218	1.58e-04	6a8h:A, 6a8i:B, 3d5z:A, 3d61:A, 6f1g:A
17	3kst:A	291	248	0.1124	0.2062	0.2419	0.013	3kst:B
18	5m8e:A	323	332	0.1442	0.2384	0.2319	0.090	5m8e:B
19	5c0p:A	284	217	0.0880	0.1655	0.2166	0.28
20	8hcj:D	433	222	0.1011	0.1247	0.2432	0.46	8hcj:E, 8hcj:H, 8hcj:A, 8hcj:B, 8hcj:G, 8hcj:C, 8hcj:F
21	3opy:B	884	97	0.0487	0.0294	0.2680	0.55	3opy:D, 3opy:F, 3opy:H
22	5m8b:A	325	238	0.1086	0.1785	0.2437	0.63	5m8b:B
23	6xn1:B	333	130	0.0637	0.1021	0.2615	0.68	6xn1:A, 6xn2:B, 6xn2:A
24	5gll:A	331	84	0.0524	0.0846	0.3333	0.91	5glk:B, 5glm:A, 5glm:B, 5gln:A, 5gln:B, 5glo:A, 5glo:B, 5glp:A, 5glp:B, 5glq:A, 5glq:B, 5glr:A, 5glr:B
25	7z87:A	3689	36	0.0206	0.0030	0.3056	1.7
26	3qed:B	305	215	0.0993	0.1738	0.2465	1.9	3qed:A, 3qed:C, 3qed:D, 3qee:A, 3qee:B, 3qef:A, 3qef:B
27	6euf:A	472	181	0.0899	0.1017	0.2652	2.1	6euf:B, 6euf:C, 6euf:D
28	4ppv:A	246	94	0.0393	0.0854	0.2234	3.1	4ppu:A
29	4cot:A	443	258	0.1199	0.1445	0.2481	3.4	2x8s:A, 2x8s:B
30	3awm:A	407	54	0.0281	0.0369	0.2778	5.7	3awp:A, 3awq:A, 3vm4:A, 3vno:A, 3voo:A, 3vtj:A
31	3aki:A	448	144	0.0693	0.0826	0.2569	8.5	3akg:A, 3akh:A
32	4g8b:A	277	28	0.0243	0.0469	0.4643	8.6	4g8b:B, 4g8c:A, 4g8c:B, 4g9e:A, 4g9e:B
33	3vsz:C	482	30	0.0243	0.0270	0.4333	8.6	3vsz:A, 3vsz:B, 3vsz:E, 3vsz:F, 3vt0:A, 3vt0:B, 3vt0:C, 3vt0:E, 3vt0:F, 3vt1:B, 3vt1:C, 3vt1:E, 3vt1:F, 3vt1:A, 3vt2:A, 3vt2:B, 3vt2:C, 3vt2:D, 3vt2:E, 3vt2:F

[Back]