Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
SLEVAQEYRNLEFDARGSRQTIQIDGPAEWHISTSESWCKSSHTIGEGKQYVNITVEANDTQKERTATVTVSASGAPDII
INVKQSLYSVPAYDEYIAPDNTGMRDLTSMQLSALMKAGVNVGNTFEAVIVGNDGSLSGDETCWGNPTPNKVLFEGIKAA
GFDVVRIPVAYSHQFEDAATYKIKSAWMDKVEAAVKAALDAGLYVIINIHWEGGWLNHPVDANKEALDERLEAMWKQIAL
RFRDYDDRLLFAGTNEVNNDDANGAQPTEENYRVQNGFNQVFVNTVRATGGRNHYRHLIVQAYNTDVAKAVAHFTMPLDI
VQNRIFLECHYYDPYDFTIMPNDENFKSQWGAAFAGGDVSATGQEGDIEATLSSLNVFINNNVPVIIGEYGPTLRDQLTG
EALENHLKSRNDYIEYVVKTCVKNKLVPLYWDAGYTEKLFDRTTGQPHNAASIAAIMKGLNL

The query sequence (length=462) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3zmr:A 469 462 1.0000 0.9851 1.0000 0.0 3zmr:B
2 8oz1:A 373 384 0.3139 0.3887 0.3776 2.30e-81 6ha9:A, 6ha9:B, 6haa:A, 6haa:B, 5oyd:A, 5oyd:B, 5oye:A, 5oye:B
3 2jeq:A 359 372 0.2987 0.3844 0.3710 5.69e-64
4 6wqp:B 354 329 0.2511 0.3277 0.3526 2.43e-57 6wqv:A, 6wqv:B, 6wqv:C, 6wqv:D
5 3ndz:A 345 370 0.2641 0.3536 0.3297 5.72e-49 3ndz:C, 3ndz:B, 3ndz:D
6 4yhg:A 389 366 0.2446 0.2905 0.3087 1.59e-45
7 4w8b:A 386 341 0.2446 0.2927 0.3314 1.77e-43
8 3ays:A 357 376 0.2403 0.3109 0.2952 2.81e-43
9 6gl0:A 331 369 0.2338 0.3263 0.2927 7.12e-42 6gl0:B, 6gl0:C
10 4yzt:A 512 341 0.2424 0.2188 0.3284 7.66e-42
11 8ghy:A 362 377 0.2532 0.3232 0.3103 7.28e-41 8ghy:B
12 5d9n:A 349 280 0.2056 0.2722 0.3393 6.38e-39 5d9m:A, 5d9m:B, 5d9n:B, 5d9o:A, 5d9o:B, 5d9p:A, 5d9p:B
13 5h4r:A 375 379 0.2403 0.2960 0.2929 1.31e-37
14 4w88:B 340 315 0.2056 0.2794 0.3016 1.33e-34 4w86:A, 4w86:B, 4w87:A, 4w87:B, 4w88:A, 4w89:A, 4w89:B
15 4v2x:A 534 352 0.1926 0.1667 0.2528 4.81e-31
16 3nco:A 313 344 0.1861 0.2748 0.2500 2.63e-22 3nco:B, 3rjy:A
17 6ujf:A 301 335 0.1970 0.3023 0.2716 1.70e-21
18 3amg:A 311 332 0.1883 0.2797 0.2620 2.69e-21 3aof:B, 3aof:A, 3azr:A, 3azr:B, 3azs:A, 3azs:B, 3azt:A, 3azt:D, 3mmw:A, 3mmw:B, 3mmw:C, 3mmw:D
19 7vt5:A 311 337 0.1818 0.2701 0.2493 3.41e-21 7vt6:A, 7vt7:A
20 3amg:B 291 323 0.1818 0.2887 0.2601 1.55e-20
21 4u5k:A 304 282 0.1710 0.2599 0.2801 1.02e-17 4u5i:A, 4u5i:B, 4u5k:B
22 5d8z:A 324 96 0.0584 0.0833 0.2812 6.17e-05 5d8z:B
23 5l9c:A 304 189 0.0801 0.1217 0.1958 6.32e-04 5l9c:B, 5l9c:C, 5l9c:D
24 4w7v:A 313 189 0.0931 0.1374 0.2275 0.006 4w7w:A
25 5ecu:A 350 190 0.0974 0.1286 0.2368 0.013
26 5i78:A 305 177 0.0758 0.1148 0.1977 0.015 5i79:A, 5i79:B
27 1cen:A 334 185 0.0801 0.1108 0.2000 0.077
28 7r29:A 305 201 0.0844 0.1279 0.1940 0.100 7r29:B, 7r2c:A, 7r2c:B, 7r2d:A, 7r2d:B
29 6tvk:AAA 660 112 0.0606 0.0424 0.2500 1.2
30 5eb8:A 354 96 0.0628 0.0819 0.3021 1.3 5eb8:B, 5eba:A, 5efd:A, 5efd:B, 5eff:A, 5eff:B, 2f8q:A, 2f8q:B, 2fgl:A, 2fgl:B, 4qce:A, 4qce:B, 4qcf:A, 4qdm:A, 4qdm:B, 5xc0:A, 5xc0:B, 5xc1:A, 5xc1:B
31 8bqb:A 331 85 0.0498 0.0695 0.2706 1.3 8bqb:B, 8bqb:C
32 7v1l:B 221 70 0.0368 0.0769 0.2429 1.6 7v6p:A
33 7cpl:A 358 87 0.0606 0.0782 0.3218 1.6 7cpk:A, 6lps:A, 2uwf:A, 8xy0:A, 8y1m:A, 8y1m:B
34 2jie:A 445 50 0.0325 0.0337 0.3000 1.8 2o9r:A, 2o9t:A, 2z1s:A
35 3m34:A 632 78 0.0498 0.0364 0.2949 1.8 3m6l:A, 3m7i:A
36 3un6:A 291 74 0.0455 0.0722 0.2838 2.7
37 1isv:A 436 179 0.0952 0.1009 0.2458 3.9 2d20:A, 2d20:B, 2d22:A, 2d22:B, 2d23:A, 2d23:B, 2d24:A, 2d24:B, 1e0v:A, 1e0x:A, 1e0x:B, 2g3j:A, 5gqd:A, 5gqd:B, 5gqe:A, 5gqe:B, 1isv:B, 1isw:A, 1isw:B, 1isx:A, 1isx:B, 1isy:A, 1isy:B, 1isz:A, 1isz:B, 1it0:A, 1it0:B, 1od8:A, 1v0k:A, 1v0l:A, 1v0m:A, 1v0n:A, 1v6u:A, 1v6u:B, 1v6v:A, 1v6v:B, 1v6w:A, 1v6w:B, 1v6x:A, 1v6x:B
38 8ui7:A 643 49 0.0346 0.0249 0.3265 4.2 8ui8:A, 8ui9:A, 8uii:A
39 3dzv:A 265 93 0.0433 0.0755 0.2151 5.7 3dzv:B
40 4mkh:A 218 44 0.0325 0.0688 0.3409 7.3 3dkv:A, 4mkg:A, 4qbf:A, 4tyq:A, 4tyq:B
41 8hil:A 860 114 0.0628 0.0337 0.2544 7.9 8him:A
42 1h4p:A 408 60 0.0390 0.0441 0.3000 8.2

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218