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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
SKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFNQIDNAPEEKARGITINTSHVEYDTPTRHYAHVD
CPGAADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQY
DFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGE
EVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHT
PFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLS

The query sequence (length=393) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 1ob2:A 393 393 0.9924 0.9924 0.9924 0.0 1d8t:A, 1d8t:B, 1dg1:G, 1dg1:H, 1efc:A, 1efc:B, 6eze:A, 6eze:B, 8fr3:A, 8fr3:B, 2fx3:A, 4g5g:A, 8g7p:z, 8g7q:z, 5jbq:A, 5mi3:A, 5mi3:B, 5mi8:A, 5mi8:B, 5mi9:A, 5mi9:B, 4p3y:A, 8qfs:C, 8qhc:C, 3u2q:A, 3u6k:A, 3u6k:B, 5uyk:Z, 5uyl:Z, 5uym:Z, 5uyn:Z, 5uyp:Z, 5uyq:Z, 4v69:AZ, 4v6k:BC, 4v6l:AC, 5wdt:z, 6wd2:8, 6wd3:8, 6wd5:8, 6wd6:8, 6wd8:8, 5we4:z, 5we6:z, 5wf0:z, 5wfk:z, 5wfs:z
2 3avt:A 1203 393 0.9364 0.3059 0.9364 0.0 7abz:6, 5afi:z, 3agp:A, 3agq:A, 3avu:A, 3avv:A, 3avw:A, 3avx:A, 3avy:A, 7bbn:A, 7bbn:B, 2bvn:A, 2bvn:B, 1efm:A, 1etu:A, 4fwt:A, 2hcj:A, 2hcj:B, 2hdn:A, 2hdn:B, 2hdn:C, 2hdn:D, 2hdn:E, 2hdn:F, 2hdn:G, 2hdn:H, 2hdn:I, 2hdn:J, 2hdn:K, 2hdn:L, 5i4r:C, 5i4r:D, 5i4r:G, 5i4r:H, 3mmp:G, 5opd:A, 5opd:B, 4pc2:A, 4pc2:B, 4pc3:A, 4pc3:B, 4pc6:A, 4pc6:B, 4pc7:A, 3u6b:B, 3u6b:A, 3vnu:A, 3vnv:A, 6wd4:8, 6wd7:8, 6wd9:8, 6wda:8
3 4zv4:A 392 389 0.8321 0.8342 0.8406 0.0 4zv4:B
4 6gfu:A 386 385 0.8041 0.8187 0.8208 0.0 5w76:A, 5w7q:A
5 6mij:A 388 388 0.8346 0.8454 0.8454 0.0
6 6htw:B 385 384 0.7888 0.8052 0.8073 0.0 6htw:H, 6i8r:A
7 8rdw:H 386 384 0.7990 0.8135 0.8177 0.0 8rd8:H
8 4iw3:B 380 386 0.7532 0.7789 0.7668 0.0 4iw3:K, 4j0q:A, 4j0q:B, 4j0q:C, 4j0q:D, 4j0q:E
9 8v9l:x 387 388 0.7328 0.7442 0.7423 0.0 7vok:A, 7vok:B, 7vok:C, 7vok:D
10 1b23:P 405 404 0.7277 0.7062 0.7079 0.0 2c77:A, 2c78:A, 1eft:A, 1exm:A, 4h9g:A, 1ha3:A, 4lbv:A, 4lbw:A, 4lby:A, 4lbz:A, 4lc0:A, 1mj1:A, 1ob5:A, 1ob5:C, 1ob5:E, 2p8w:S, 2p8x:S, 2p8z:S, 1ttt:A, 1ttt:B, 1ttt:C, 1tui:A, 1tui:B, 1tui:C, 4v5l:AZ, 4v8q:BZ
11 5w75:C 387 385 0.7048 0.7158 0.7195 0.0 5w75:B, 5w75:D, 5w75:A
12 7paj:9 393 392 0.6947 0.6947 0.6964 0.0 7pak:9, 7pha:9, 7pi9:9, 7pip:9
13 4v5p:AZ 385 403 0.7048 0.7195 0.6873 0.0 1ha3:B, 4v5g:AZ, 4v5g:CZ, 4v5p:CZ, 4v5q:AZ, 4v5q:CZ, 4v5r:AZ, 4v5r:CZ, 4v5s:AZ, 4v5s:CZ, 4v68:AZ
14 7vmx:B 359 385 0.6921 0.7577 0.7065 0.0
15 1d2e:A 397 382 0.5598 0.5542 0.5759 3.96e-163 7a5g:Z, 1d2e:B, 1d2e:C, 1d2e:D, 7o9k:t
16 3wy9:A 416 423 0.3919 0.3702 0.3641 5.32e-64 3wy9:B, 3wya:A
17 6ji2:A 432 435 0.3511 0.3194 0.3172 2.08e-54 4cxg:A, 4cxh:A, 6ji2:E, 3vmf:A, 3wxm:A, 3wxm:C, 3wxm:E, 3wxm:G
18 1skq:A 416 425 0.3308 0.3125 0.3059 1.97e-48 1jny:A, 1jny:B, 1skq:B
19 5lzw:jj 425 430 0.3206 0.2965 0.2930 3.33e-44 5lzx:jj, 5lzy:jj, 5lzz:jj
20 5o8w:A 449 441 0.3282 0.2873 0.2925 3.93e-40 2b7b:A, 9bdp:EF1A, 1g7c:A, 1ije:A, 1ijf:A
21 6ra9:B 458 444 0.3181 0.2729 0.2815 9.03e-40 8b6z:A, 4c0s:A, 4c0s:B, 8g5z:EF, 8g60:EF, 8g6j:EF, 5lzs:jj, 6ra9:A, 6zmo:CD
22 5lzb:z 614 383 0.2952 0.1889 0.3029 2.17e-37 5lzc:z, 5lzd:z, 2pjp:A
23 4ac9:C 471 296 0.2341 0.1953 0.3108 5.14e-36 4ac9:A, 4ac9:B, 4aca:B, 4aca:C, 4acb:A, 4acb:B, 4acb:C
24 5lzt:jj 428 344 0.2646 0.2430 0.3023 2.59e-30 4d61:i, 5hxb:X, 5hxb:A, 7nwh:jj, 6xk9:X, 6xk9:A
25 2dcu:A 407 348 0.2646 0.2555 0.2989 2.91e-28 2d74:A, 1kjz:A, 1kk0:A, 1kk1:A, 1kk2:A, 1kk3:A
26 5izm:B 495 284 0.2036 0.1616 0.2817 6.82e-27 5izk:A, 5izm:A
27 7zjw:E 519 289 0.2188 0.1657 0.2976 7.92e-27 5izl:A, 5izl:B
28 4zu9:A 582 292 0.2265 0.1529 0.3048 8.71e-26
29 3qsy:A 415 301 0.2290 0.2169 0.2990 1.62e-25 2aho:A, 3cw2:B, 6i5m:A, 5jb3:7, 5jbh:7, 4m0l:A, 4m0l:B, 4m0l:C, 4m0l:D, 4m0l:E, 4m0l:F, 4m2l:A, 4m4s:A, 4nbs:A, 3pen:A, 2pmd:A, 2pmd:B, 4qfm:A, 4qhy:A, 2qmu:A, 2qn6:A, 6r8s:A, 6r8t:A, 4rcy:A, 4rcz:A, 4rd0:A, 4rd1:A, 4rd2:A, 4rd3:A, 4rd4:A, 4rd6:A, 4rjl:A, 3sjz:A, 6sw9:7, 6swc:7, 3v11:A
30 1s0u:A 391 321 0.2468 0.2481 0.3022 9.96e-24
31 3p27:B 444 338 0.2239 0.1982 0.2604 7.16e-21 3p27:A
32 5m1j:A6 539 363 0.2366 0.1725 0.2562 9.08e-20
33 7ase:5 421 263 0.1959 0.1829 0.2928 1.32e-19
34 7qp6:t 356 242 0.1858 0.2051 0.3017 2.94e-19 7qp7:t, 6ybv:t, 6zmw:t
35 5aa0:BZ 605 248 0.2087 0.1355 0.3306 4.16e-19 5a9z:CA, 4zck:A, 4zcl:A, 4zcl:B, 4zcm:A, 4zcm:B
36 3j81:k 365 247 0.1908 0.2055 0.3036 1.09e-18
37 8cas:G 396 264 0.1985 0.1970 0.2955 2.40e-18 6fyy:k, 6i3m:O, 6i3m:P, 6i7t:O, 6i7t:P, 3jap:k, 8s8f:k
38 4crn:P 430 345 0.2621 0.2395 0.2986 2.95e-18
39 8qzz:A 433 261 0.1908 0.1732 0.2874 1.33e-17 7a09:Y, 6zp4:Y
40 8pj1:t 472 274 0.1883 0.1568 0.2701 5.76e-17 7d43:P, 6fec:S, 5k0y:S, 6k71:P, 6k72:P, 8oz0:E, 8pj2:t, 8ppl:It, 6yal:B, 6yam:B, 6yan:B
41 8rw1:k 470 267 0.1985 0.1660 0.2921 9.98e-17 6fyx:k, 6gsm:k, 6gsn:k, 6qg0:M, 6qg0:N, 6qg1:M, 6qg1:N, 6qg2:M, 6qg3:M, 6qg5:M, 6qg6:M, 6qg6:N, 8s8d:k, 8s8e:k, 8s8g:k, 8s8h:k, 8s8i:k, 8s8j:k
42 5a9y:A 562 240 0.1858 0.1299 0.3042 3.51e-16 5a9x:A
43 3j9y:w 639 151 0.1272 0.0782 0.3311 2.57e-15 5kcs:1w
44 1r5o:A 409 326 0.2112 0.2029 0.2546 4.77e-15 1r5n:A
45 7pua:IA 704 303 0.2188 0.1222 0.2838 2.78e-13 7pub:IA
46 5izk:B 451 286 0.1883 0.1641 0.2587 4.39e-13
47 1zun:B 394 396 0.2468 0.2462 0.2449 4.60e-13
48 4v6v:A1 639 129 0.1069 0.0657 0.3256 3.75e-12
49 7unv:x 593 125 0.1247 0.0826 0.3920 7.49e-11 7unq:x, 7unr:x, 7unt:x, 7unu:x, 7unw:x
50 3izy:P 537 232 0.1959 0.1434 0.3319 1.07e-10
51 8hl1:AEFG 725 334 0.2214 0.1200 0.2605 1.30e-10 8hl2:AEFG, 8hl3:AEFG, 8hl4:AEFG
52 5anb:K 1120 132 0.1069 0.0375 0.3182 1.63e-10 5anc:K
53 2lkd:A 178 125 0.1170 0.2584 0.3680 2.22e-10
54 6gaw:BC 571 232 0.1832 0.1261 0.3103 8.01e-10 6gaz:BC, 6gb2:BC, 7po2:7, 8qrn:7, 6rw5:7
55 5j8b:z 671 250 0.1730 0.1013 0.2720 1.07e-09 5imq:B
56 5imr:C 570 239 0.1654 0.1140 0.2720 1.82e-09
57 3jce:x 586 328 0.1985 0.1331 0.2378 4.97e-09 3deg:C
58 7yyp:A 597 131 0.1094 0.0720 0.3282 2.04e-08 7yzn:A, 7zag:7, 7zah:7, 7zki:7
59 3tr5:A 518 129 0.1018 0.0772 0.3101 7.45e-08 3tr5:B, 3tr5:C, 3tr5:D
60 7pao:9 682 128 0.1018 0.0587 0.3125 8.65e-08 7paq:9, 7par:9, 7pib:9, 7pis:9, 7pit:9
61 7nsh:BC 700 135 0.1094 0.0614 0.3185 1.39e-07 7l20:w
62 5lmv:a 502 123 0.1043 0.0817 0.3333 1.77e-07
63 8fzi:v 525 147 0.1145 0.0857 0.3061 2.36e-07 8fzd:v, 8fzf:v, 8fzg:v, 8fzj:v, 6gwt:w, 6gxm:w, 6gxn:w, 6gxo:w, 6gxp:w, 2h5e:A, 2h5e:B, 6lkq:v, 7m5d:7, 4v85:AW, 4v89:AW, 4v8o:AY
64 6u45:A 726 151 0.1349 0.0730 0.3510 2.49e-07 6u43:A, 6u44:A, 6u44:B, 6u45:B
65 3vr1:A 516 171 0.1247 0.0950 0.2865 2.91e-07 3vqt:A, 3vqt:B, 3vqt:C, 3vqt:D, 3vr1:B, 3vr1:C, 3vr1:D
66 6vlz:v 712 147 0.1069 0.0590 0.2857 3.24e-07 7a5k:r1, 6vmi:v, 6ydp:BC, 6ydw:BC
67 5fg3:A 598 272 0.2061 0.1355 0.2978 4.61e-07 5yt0:A
68 7n2v:EF 704 148 0.1069 0.0597 0.2838 9.22e-07 3j9z:S1, 3ja1:S3, 7k51:8, 7k52:8, 7k54:8, 7k55:8, 7n2c:EF, 7otc:w, 7pjv:x, 7pjw:x, 7pjy:x, 7pjz:x, 7ss9:8, 7ssd:8, 7ssl:8, 7st7:8, 7ug7:EF, 4v7b:AY, 4v7d:BZ, 4v9o:BV, 4v9o:DV, 4v9o:FV, 4v9o:HV, 4v9p:BV, 4v9p:DV, 4v9p:FV, 4v9p:HV
69 9ax8:z 509 113 0.1094 0.0845 0.3805 9.72e-07 3jcj:f, 3jcn:b, 5me0:W, 5me1:W, 6o7k:f, 6o9k:z
70 3wnb:A 361 260 0.1527 0.1662 0.2308 1.01e-06 3wnc:A
71 5h7l:A 694 159 0.1069 0.0605 0.2642 1.39e-06 5h7k:A, 5h7l:B
72 5h7l:A 694 37 0.0356 0.0202 0.3784 3.9 5h7k:A, 5h7l:B
73 8dmf:A 718 181 0.1196 0.0655 0.2597 1.62e-06 7uvp:A
74 8cf5:Aa 842 158 0.1170 0.0546 0.2911 4.71e-06 8cdr:Aa, 8ceh:Aa, 8cg8:Aa, 8civ:Aa, 8cku:Aa, 8cmj:Aa, 2e1r:A, 8eub:DC, 8evq:DC, 8evr:DC, 8evs:DC, 8ewb:DC, 6gq1:AZ, 6gqb:AZ, 6gqv:AX, 5it7:1, 5juo:DC, 5jup:DC, 5jus:DC, 5jut:DC, 5juu:DC, 8k2d:CD, 1n0u:A, 2npf:A, 2npf:B, 7osa:eEF2, 7osm:eEF2, 2p8w:T, 2p8x:T, 2p8y:T, 2p8z:T, 1u2r:A, 4v4b:AT, 1zm2:E
75 7siq:A 524 137 0.1043 0.0782 0.2993 5.46e-06
76 4v6w:Az 837 170 0.1272 0.0597 0.2941 7.73e-06
77 8q87:A 857 169 0.1221 0.0560 0.2840 1.03e-05 6d9j:9, 6gz3:Ct, 6gz4:Ct, 6gz5:Ct, 3j7p:4, 7ls1:m, 7ls2:m, 6mtd:v, 6mte:v, 7oyc:v2, 4v6x:Az, 8xsx:CB, 6z6m:CB, 6z6n:CB
78 4v9h:AY 622 142 0.1069 0.0675 0.2958 1.06e-05
79 4kjz:C 458 123 0.1018 0.0873 0.3252 1.07e-05 4b43:A, 4b44:A, 4b47:A, 4b48:A, 4kjz:A
80 1g7s:A 576 132 0.0941 0.0642 0.2803 2.17e-05 1g7t:A
81 4fn5:A 670 135 0.0992 0.0582 0.2889 3.39e-05
82 2ywf:A 532 275 0.1654 0.1222 0.2364 3.78e-05 2ywg:A, 2ywh:A
83 5ty0:A 378 130 0.0891 0.0926 0.2692 8.62e-05
84 8y0w:CB 768 147 0.1043 0.0534 0.2789 1.33e-04 8y0x:CB
85 4w2e:y 644 243 0.1476 0.0901 0.2387 1.40e-04
86 2bv3:A 632 142 0.0941 0.0585 0.2606 1.74e-04 1dar:A
87 8ro0:C 898 121 0.0916 0.0401 0.2975 2.88e-04 8ro1:C
88 2dy1:A 660 132 0.0891 0.0530 0.2652 3.27e-04 1wdt:A
89 7old:C 813 138 0.1043 0.0504 0.2971 7.86e-04
90 7pjx:x 522 138 0.1018 0.0766 0.2899 8.04e-04
91 7oyd:v 726 132 0.0967 0.0523 0.2879 0.001
92 8ro2:C 908 135 0.0916 0.0396 0.2667 0.002 7aav:r, 7abf:r, 7abg:r, 7abi:r, 6ah0:C, 6ahd:C, 8c6j:C, 8ch6:b, 7dvq:C, 6ff4:B, 6ff7:B, 9fmd:C, 8h6e:5C, 8h6j:5C, 8h6k:5C, 8h6l:5C, 8i0p:C, 8i0r:C, 8i0s:C, 8i0t:C, 8i0u:C, 8i0v:C, 8i0w:C, 6icz:C, 6id0:C, 6id1:C, 8q7q:C, 8q7v:C, 8q7w:C, 8q7x:C, 8q91:C, 6qdv:C, 8qp8:C, 7qtt:b, 6qw6:5C, 6qx9:5C, 8rc0:C, 7w59:C, 7w5a:C, 7w5b:C, 5xjc:C, 8y6o:D, 5yzg:C, 5z56:C, 5z57:C, 5z58:C, 6zym:B
93 8bsi:a 815 159 0.1170 0.0564 0.2893 0.002
94 4ncl:B 435 131 0.1018 0.0920 0.3053 0.003 4ncl:A, 4ncn:A, 4ncn:B, 4tmt:A, 4tmt:B, 4tmv:B, 4tmv:A, 4tmw:A, 4tmw:B, 4tmx:A, 4tmx:B, 4tmz:B, 4tmz:A, 4tn1:B, 4tn1:A
95 5hau:1z 730 142 0.0916 0.0493 0.2535 0.003 2bm0:A, 2bm1:A, 1fnm:A, 6gzq:H1, 6gzx:H1, 6gzx:H2, 6gzz:H1, 6gzz:H2, 5hau:2z, 4m1k:A, 4myt:A, 4myu:A, 2om7:L, 5ot7:U, 6q95:G, 6ucq:1v, 6ucq:2v, 4v5f:AY, 4v5f:CY, 4v5m:AY, 4v5n:AY, 4v6t:AY, 4v8u:AY, 4v8u:CY, 4v90:AY, 4v9j:AY, 4v9j:CY, 4v9k:AY, 4v9k:CY, 4v9l:AY, 4v9l:CY, 4v9m:AY, 4v9m:CY, 4w29:AY, 4w29:CY, 4wpo:BZ, 4wpo:DZ, 4wqf:BZ, 4wqf:DZ, 4wqu:BZ, 4wqu:DZ, 4wqy:BZ, 4wqy:DZ
96 6uz7:1 600 132 0.1069 0.0700 0.3182 0.005 4v8y:CP
97 8p2f:E 670 134 0.0992 0.0582 0.2910 0.007 8p2g:E, 8p2h:E
98 6woo:1 600 130 0.1018 0.0667 0.3077 0.009 4ncf:A, 4ncf:B, 3wbk:A
99 7syv:x 627 135 0.1043 0.0654 0.3037 0.010 8pj3:0, 8pj4:0, 8pj5:0, 7syw:x, 7syx:x, 7tql:1, 4ujc:AB, 4ujd:BB
100 3jb9:B 904 127 0.0865 0.0376 0.2677 0.012
101 4v8z:CV 568 130 0.1018 0.0704 0.3077 0.012
102 1efg:A 592 142 0.0941 0.0625 0.2606 0.018 2efg:A
103 6j6g:C 920 111 0.0611 0.0261 0.2162 0.022 7b9v:C, 6bk8:B, 7dco:C, 5gm6:C, 5gmk:C, 6j6h:C, 6j6n:C, 6j6q:C, 3jcm:H, 6teo:A, 6teo:C, 5wsg:C, 5y88:C, 5ylz:C, 5zwm:C, 5zwo:C
104 5lj3:C 882 111 0.0611 0.0272 0.2162 0.023 6exn:C, 5gam:C, 5gan:C, 5lj5:C, 5lqw:B, 5mps:C, 5mq0:C, 5nrl:C
105 7cdw:A 683 128 0.0891 0.0512 0.2734 0.034 7cdw:B
106 6fku:A 511 50 0.0534 0.0411 0.4200 1.4 6fku:B
107 3kxi:A 326 153 0.0967 0.1166 0.2484 4.8 2qth:A
108 6ruz:A 443 41 0.0382 0.0339 0.3659 6.1 6ruz:B, 6ruz:C, 6ruz:D, 6rvb:A, 6rvb:B, 6rvb:C, 6rvb:D, 6rvh:A, 6rvh:B, 6rvh:C, 6rvh:D
109 1u0l:A 278 93 0.0738 0.1043 0.3118 6.2 1u0l:B, 1u0l:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218