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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
SKASTNPDRVQGAGGQNMRDRATIRRLNMYRQKERRNSRGKIIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQK
FQEEMDTVMSKLPMSLNLKVHILDTESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDTGVRNE
AQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVL
SQDYPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYIT
LMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKSPEDHIGAVLERAKPEYISKTYKIDSWENAEDFLEKLAFRTGKL
LKGGEPDLQTVGKMVLNDWQRGRIPFFVKPPNA

The query sequence (length=433) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8fl2:NC 511 445 0.9954 0.8434 0.9685 0.0 8fkz:NC, 8fl0:NC, 8fl3:NC, 8fl4:NC, 8idt:A, 8idy:A, 8ie3:A, 8ine:A, 8inf:A, 8ink:w, 8ipd:w, 8ipx:w, 8ipy:w, 8ir1:w, 8ir3:w
2 7btb:m 469 444 0.5658 0.5224 0.5518 1.73e-168 7bt6:m, 6ft6:m, 3jct:m, 6m62:m, 7oh3:m, 7ohq:m, 7oht:m, 7ug6:m, 7uoo:m, 7uqb:m, 7uqz:m, 7uui:m, 7v08:m, 6ylg:m, 6ylh:m
3 8pv1:Cd 462 444 0.5242 0.4913 0.5113 1.81e-148 8pv2:Cd, 8pv3:Cd, 8pv4:Cd, 8pv5:Cd, 8pv6:Cd, 8pv7:Cd, 8pv8:Cd, 8pvk:Cd, 8pvl:Cd
4 6n8j:m 378 418 0.5081 0.5820 0.5263 5.73e-145
5 7of1:m 229 282 0.2748 0.5197 0.4220 3.15e-61
6 8fkt:NB 387 287 0.2263 0.2532 0.3415 2.19e-51 8fkp:NB, 8fku:NB, 8fkv:NB, 8fkw:NB, 8fkx:NB, 8fky:NB, 8fkz:NB, 8fl0:NB, 8ink:u, 8ipd:u, 8ipx:u, 8ipy:u
7 8i9w:CL 397 316 0.2194 0.2393 0.3006 6.67e-35 8i9t:CL, 8i9v:CL, 8i9x:CL, 8i9y:CL, 8i9z:CL, 8ia0:CL, 8pv1:CL, 8pv2:CL, 8pv3:CL, 8pv4:CL, 8pv5:CL, 8pv6:CL, 8pv7:CL, 8pv8:CL, 8pvk:CL, 8pvl:CL
8 6qtz:o 325 273 0.1894 0.2523 0.3004 2.36e-32 6qik:o, 6ri5:o, 6rzz:o, 6s05:o
9 6n8n:W 377 286 0.1940 0.2228 0.2937 1.14e-30 6n8o:W
10 5t62:W 306 263 0.1848 0.2614 0.3042 2.19e-30
11 8hfr:v9 106 91 0.0993 0.4057 0.4725 5.06e-24
12 6lsr:1 247 195 0.1386 0.2429 0.3077 5.72e-18
13 3cnl:A 233 258 0.1709 0.3176 0.2868 7.62e-16 3cnn:A, 3cno:A
14 1puj:A 261 259 0.1455 0.2414 0.2432 1.56e-13 6ppk:W
15 6g0z:A 290 253 0.1455 0.2172 0.2490 2.81e-11 6g0z:B, 6g12:A, 6g12:B, 6g14:B, 6g14:A, 6g15:A, 6g15:B
16 7pd3:z 311 233 0.1501 0.2090 0.2790 1.56e-08 8pk0:z, 8qsj:z
17 7o9k:C 255 225 0.1339 0.2275 0.2578 4.31e-06 7o9m:C
18 3j8g:X 418 173 0.1085 0.1124 0.2717 2.52e-05
19 3pqc:B 194 71 0.0485 0.1082 0.2958 2.58e-05 3pqc:A
20 6yxy:EQ 471 53 0.0485 0.0446 0.3962 9.44e-05
21 3iev:A 302 78 0.0577 0.0828 0.3205 2.46e-04 7c1o:A, 3r9w:A, 3r9x:A
22 3i8x:B 261 58 0.0485 0.0805 0.3621 0.002 3hyt:A, 3hyt:B, 3hyt:C, 3i8x:A, 3i8x:C, 4r98:A, 4r98:B
23 7am2:BV 199 53 0.0439 0.0955 0.3585 0.002
24 6yxx:EM 308 247 0.1270 0.1786 0.2227 0.002
25 6yxy:EM 330 268 0.1316 0.1727 0.2127 0.006
26 8ir1:4 620 142 0.0855 0.0597 0.2606 0.006 8fkt:SR, 8fku:SR, 8fkv:SR, 8fkw:SR, 8fkx:SR, 8fky:SR, 8fkz:SR, 8fl0:SR, 8fl2:SR, 8fl3:SR, 8fl6:SR, 8fl7:SR, 8fl9:SR, 8fla:SR, 8flb:SR, 8flc:SR, 8fld:SR, 8fle:SR, 8flf:SR, 8idt:4, 8idy:4, 8ie3:4, 8ine:4, 8inf:4, 8ink:4, 8ipd:4, 8ipx:4, 8ipy:4, 8ir3:4, 6lss:4, 6lu8:4
27 5dn8:A 405 119 0.0739 0.0790 0.2689 0.007
28 5dn8:A 405 66 0.0508 0.0543 0.3333 0.010
29 6ylg:b 613 102 0.0670 0.0473 0.2843 0.007 7nac:b, 7of1:b, 7r7a:b, 6ylh:b
30 8hfr:rA 647 102 0.0670 0.0448 0.2843 0.007 7bt6:b, 7btb:b, 6c0f:W, 6ft6:b, 3jct:b, 5jcs:o, 6m62:b, 6n8j:b, 6n8k:b, 7nad:b, 7oh3:b, 7ohq:b, 7oht:b, 7r72:b, 7u0h:b, 7ug6:b, 7uoo:b, 7uqb:b, 7uqz:b, 7v08:b, 4v7f:o, 8v87:b, 6ylx:b, 6yly:b, 7z34:b
31 8fl4:SR 593 80 0.0624 0.0455 0.3375 0.007 8fkr:SR, 8fks:SR
32 2wib:A 261 58 0.0462 0.0766 0.3448 0.014 2wib:B, 2wic:A
33 1wf3:A 296 59 0.0508 0.0743 0.3729 0.015
34 8v83:b 423 102 0.0670 0.0686 0.2843 0.019 6elz:b, 6em1:b, 6em5:b, 7ohp:b, 7ohr:b, 7ohs:b, 7ohu:b, 7ohv:b, 8v84:b
35 1h65:A 257 84 0.0531 0.0895 0.2738 0.020 3bb1:A, 3bb1:B, 3bb1:C, 3bb1:D, 3bb1:E, 3bb1:F, 3bb1:G, 3bb1:H, 1h65:B, 1h65:C
36 2j3e:A 249 77 0.0600 0.1044 0.3377 0.025 3bb3:A, 3bb4:A, 3def:A
37 5m7h:A 420 121 0.0647 0.0667 0.2314 0.033 4dcs:A, 4dct:A, 4dcu:A, 2hjg:A, 5mbs:A, 5x4b:A, 5x4b:B
38 5m7h:A 420 122 0.0624 0.0643 0.2213 2.5 4dcs:A, 4dct:A, 4dcu:A, 2hjg:A, 5mbs:A, 5x4b:A, 5x4b:B
39 3a1s:A 255 100 0.0785 0.1333 0.3400 0.035 3a1s:B, 3a1t:A, 3a1u:A, 3a1u:B
40 7szs:A 204 94 0.0670 0.1422 0.3085 0.037 7szs:B
41 5ucv:A 187 57 0.0416 0.0963 0.3158 0.046
42 7am2:BT 300 222 0.1062 0.1533 0.2072 0.059
43 7rr5:R 355 70 0.0439 0.0535 0.2714 0.077
44 1svw:A 190 63 0.0393 0.0895 0.2698 0.11 1svi:A, 1svw:B
45 2gj8:D 172 60 0.0462 0.1163 0.3333 0.12 2gj8:A, 2gj8:B, 2gj8:C, 2gj9:A, 2gj9:B, 2gj9:C, 2gj9:D, 2gja:A, 2gja:B
46 1mky:A 407 96 0.0600 0.0639 0.2708 0.16
47 7ohy:b 375 79 0.0624 0.0720 0.3418 0.18
48 2wjg:A 170 80 0.0531 0.1353 0.2875 0.19 2wjg:B, 2wjh:A, 2wjh:B, 2wji:A, 2wji:B, 2wjj:A, 2wjj:B
49 1t9h:A 287 80 0.0462 0.0697 0.2500 0.21
50 7oi6:y 331 78 0.0577 0.0755 0.3205 0.21 8pk0:t
51 1xzq:A 449 122 0.0670 0.0646 0.2377 0.33 1xzq:B
52 1xzq:A 449 60 0.0439 0.0423 0.3167 0.93 1xzq:B
53 6xrs:B 392 128 0.0739 0.0816 0.2500 0.43 6xrs:A, 6xrs:D, 6xrs:C
54 6xrs:B 392 39 0.0346 0.0383 0.3846 2.3 6xrs:A, 6xrs:D, 6xrs:C
55 2ohf:A 327 136 0.0831 0.1101 0.2647 0.49
56 7nrc:So 347 65 0.0439 0.0548 0.2923 0.50
57 8eti:b 391 52 0.0508 0.0563 0.4231 0.52 8esr:b, 8etg:b
58 8etc:b 415 52 0.0508 0.0530 0.4231 0.52 8esq:b, 8etj:b
59 1lfu:P 82 30 0.0254 0.1341 0.3667 0.67 1b72:B, 1b8i:B, 4cyc:B, 1puf:B, 2r5y:B, 2r5z:B, 4uus:B, 4uus:F, 5zjq:B, 5zjr:B, 5zjs:B, 5zjt:B
60 2dby:A 355 33 0.0323 0.0394 0.4242 0.67
61 8e0a:A 168 70 0.0485 0.1250 0.3000 0.78 8e0b:A
62 8oun:A 181 47 0.0346 0.0829 0.3191 0.81 8oum:A, 8oum:B, 8oum:C, 8oum:D, 8oum:E, 8oun:B
63 7y9i:A 362 38 0.0300 0.0359 0.3421 0.88
64 8pv1:CH 627 81 0.0554 0.0383 0.2963 1.2 8i9r:CH, 8i9t:CH, 8i9v:CH, 8i9w:CH, 8i9x:CH, 8i9y:CH, 8i9z:CH, 8ia0:CH, 8pv2:CH, 8pv3:CH, 8pv4:CH, 8pv5:CH, 8pv6:CH, 8pv7:CH, 8pv8:CH, 8pvk:CH, 8pvl:CH
65 7odt:t 316 45 0.0300 0.0411 0.2889 1.3
66 8csq:a 263 64 0.0485 0.0798 0.3281 1.7
67 3gvj:A 670 22 0.0231 0.0149 0.4545 2.3 3gvk:A, 3gvk:B, 3gvk:C, 3gvl:A, 3ju4:A, 1v0f:C, 1v0f:D, 1v0f:E, 1v0f:A, 1v0f:B, 1v0f:F
68 7c4c:A 332 41 0.0300 0.0392 0.3171 2.5 7c42:A, 7c43:A, 7c45:A, 7c47:A, 7c4b:A
69 7obn:A 299 104 0.0577 0.0836 0.2404 2.8
70 3geh:A 442 74 0.0531 0.0520 0.3108 3.2
71 6h4d:A 274 100 0.0785 0.1241 0.3400 3.7
72 6u1x:A 2059 88 0.0577 0.0121 0.2841 3.8
73 5a22:A 2002 88 0.0577 0.0125 0.2841 4.0
74 8kab:h 430 25 0.0277 0.0279 0.4800 4.0
75 3aq4:A 170 110 0.0508 0.1294 0.2000 4.7 3aq4:B
76 3ieu:A 293 56 0.0370 0.0546 0.2857 5.4 3ieu:B
77 1lnz:A 342 22 0.0231 0.0292 0.4545 5.4 1lnz:B
78 7o9k:G 337 32 0.0254 0.0326 0.3438 6.2 7of5:x, 7of7:x
79 8kie:y 363 38 0.0300 0.0358 0.3421 6.2
80 1fiw:A 260 57 0.0416 0.0692 0.3158 6.4
81 3avt:A 1203 60 0.0439 0.0158 0.3167 6.8 7abz:6, 5afi:z, 3agp:A, 3agq:A, 3avu:A, 3avv:A, 3avw:A, 3avx:A, 3avy:A, 7bbn:A, 7bbn:B, 2bvn:A, 2bvn:B, 1efm:A, 1etu:A, 4fwt:A, 2hcj:A, 2hcj:B, 2hdn:A, 2hdn:B, 2hdn:C, 2hdn:D, 2hdn:E, 2hdn:F, 2hdn:G, 2hdn:H, 2hdn:I, 2hdn:J, 2hdn:K, 2hdn:L, 5i4r:C, 5i4r:D, 5i4r:G, 5i4r:H, 3mmp:G, 5opd:A, 5opd:B, 4pc2:A, 4pc2:B, 4pc3:A, 4pc3:B, 4pc6:A, 4pc6:B, 4pc7:A, 3u6b:B, 3u6b:A, 3vnu:A, 3vnv:A, 6wd4:8, 6wd7:8, 6wd9:8, 6wda:8
82 4jyb:A 323 76 0.0600 0.0805 0.3421 7.2 8dpb:A, 8dpb:B, 4jyb:B, 4jyc:D, 4lc1:A, 4lc1:B, 2qm7:A, 2qm7:B
83 3kxi:A 326 19 0.0231 0.0307 0.5263 8.1 2qth:A
84 1vbj:A 281 58 0.0439 0.0676 0.3276 8.2 1vbj:B
85 6vs4:A 223 139 0.0716 0.1390 0.2230 9.0 6vs4:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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