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BioLiP
>protein
SHHHHHHGRSAAGTMANLDKMLNTTVTEVRKFLQADRVCVFKFEEDYSGTVSHEAVDDRWISILKTQVQDRYFMETRGEE
YVHGRYQAIADIYTANLVECYRDLLIEFQVRAILAVPILQGKKLWGLLVAHQLAGPREWQTWEIDFLKQQAVVMGIAIQQ
S

The query sequence (length=161) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7lsc:A 161 161 1.0000 1.0000 1.0000 1.07e-120 7lsc:B, 7lsc:C, 7lsc:D, 6mgh:A, 6mgh:B, 6mgh:C, 6mgh:D, 6mgh:E, 6mgh:F, 6mgh:G, 6mgh:H
2 7lsd:B 152 152 0.7578 0.8026 0.8026 2.66e-90 7lsd:A, 7lsd:C, 7lsd:D
3 6ob8:A 307 145 0.5031 0.2638 0.5586 2.52e-55 6oap:A, 6oap:B, 6oaq:A, 6oaq:B, 6ob8:B
4 3w2z:A 178 151 0.3602 0.3258 0.3841 8.12e-36 5zoh:A
5 5m85:A 159 149 0.3602 0.3648 0.3893 3.31e-31 5m82:A
6 6bhn:A 156 150 0.3106 0.3205 0.3333 1.87e-29 6bho:A
7 4fof:A 168 140 0.3292 0.3155 0.3786 1.29e-27 4glq:A, 2m7u:A, 2m7v:A, 6p58:A, 6p58:B, 6pru:A, 6pru:B, 6pry:A, 6pry:B, 6upp:A, 6upp:B, 3vv4:A, 3vv4:B
8 6xhh:B 180 163 0.3168 0.2833 0.3129 6.65e-24 6xhg:A, 6xhg:B, 6xhh:A
9 6uv8:A 183 159 0.2298 0.2022 0.2327 3.63e-11 6uvb:A
10 2k2n:A 172 169 0.2981 0.2791 0.2840 1.53e-10 2lb9:A
11 6ozb:C 193 168 0.2733 0.2280 0.2619 7.77e-10 6ozb:A, 6ozb:B
12 4bwi:A 381 164 0.2919 0.1234 0.2866 3.79e-08 4bwi:B
13 2vea:A 500 150 0.2174 0.0700 0.2333 3.20e-05
14 6bap:A 505 147 0.2050 0.0653 0.2245 7.02e-05 6baf:A, 6bak:A, 6bao:A, 6bao:B, 6bap:B, 6bap:C, 6bay:A, 6bay:B, 6bay:C, 4rq9:A
15 9eut:A 728 138 0.1988 0.0440 0.2319 0.002 3c2w:A, 3c2w:B, 3c2w:C, 3c2w:D, 3c2w:E, 3c2w:F, 3c2w:G, 3c2w:H, 9eut:B, 9euy:A, 9euy:B, 3g6o:A, 3g6o:B, 3ibr:A, 3ibr:B, 3nhq:A, 3nhq:B, 3nhq:C, 3nhq:D, 3nhq:E, 3nhq:F, 3nhq:G, 3nhq:H, 3nop:C, 3not:C, 3nou:C
16 4r6l:A 473 189 0.2484 0.0846 0.2116 0.009 4e04:A, 4e04:B, 4r6l:B, 4s21:A, 4s21:B
17 6tby:AAA 320 144 0.2547 0.1281 0.2847 0.011 6tc5:AAA
18 4r70:A 498 178 0.2236 0.0723 0.2022 0.029 2ool:A, 2ool:B, 4r70:B
19 4gw9:A 628 143 0.2050 0.0525 0.2308 0.041 4gw9:B, 4gw9:C, 4gw9:D, 5oy5:A, 5vik:A, 5viq:A, 5viv:A, 4xtq:A
20 8ulg:A 827 37 0.0870 0.0169 0.3784 0.12 7jsn:A, 6mzb:A, 8ufi:A, 8ugb:A, 8ugs:A
21 7l48:A 522 90 0.1366 0.0421 0.2444 0.17 7c7l:A, 7l48:B, 7l49:A, 7l49:B
22 7l5a:A 477 127 0.1615 0.0545 0.2047 0.23
23 8ulg:B 824 49 0.0932 0.0182 0.3061 0.25 7jsn:B, 6mzb:B, 8ufi:B, 8ugb:B, 8ugs:B
24 8u64:A 487 40 0.0870 0.0287 0.3500 0.25 8u64:B, 8u65:B, 8u65:A
25 6pl0:B 608 127 0.1615 0.0428 0.2047 0.25 5akp:A, 5akp:B, 7l59:A, 6ndo:A, 6ndo:B, 6ndp:A, 6ndp:B, 6pl0:A, 5uyr:A, 5uyr:B
26 6g1y:B 493 146 0.1801 0.0588 0.1986 0.25 6g1y:A, 6g1z:A, 6g1z:B, 6g20:A, 6g20:B
27 8u8z:A 517 40 0.0870 0.0271 0.3500 0.25 8u4x:A, 8u4x:B, 8u62:B, 8u62:A, 8u63:A, 8u63:B, 8u8z:B
28 4our:A 448 43 0.0994 0.0357 0.3721 0.34 4our:B
29 7rzw:B 864 43 0.0994 0.0185 0.3721 0.45 7rzw:A
30 8avw:B 579 42 0.0870 0.0242 0.3333 0.93 8avw:A
31 8upk:A 739 36 0.0807 0.0176 0.3611 1.0 8uph:A, 8uph:B, 8upk:B, 8upm:A, 8upm:B
32 6tl4:A 496 34 0.0870 0.0282 0.4118 1.3
33 7jr5:A 482 35 0.0807 0.0270 0.3714 1.8 7jr5:B, 7jri:A, 7jri:B, 6ptq:A, 6ptq:B, 6ptx:A, 6ptx:B, 6pu2:A, 6pu2:B
34 6et7:A 646 143 0.1801 0.0449 0.2028 2.0 6et7:B
35 5llw:B 673 143 0.1801 0.0431 0.2028 2.0 5llw:A, 5llx:A, 5llx:B, 5lly:D, 5lly:A, 5lly:C, 5lly:B, 6saw:A, 6saw:B, 6saw:C, 6saw:D, 6saw:E, 6saw:F, 6saw:G, 6saw:H, 6sax:B, 6sax:A
36 8iff:A 868 39 0.0870 0.0161 0.3590 2.0 8f5z:B, 8f5z:A, 8iff:B, 8isj:A, 8isj:B
37 6tc7:BBB 319 39 0.0870 0.0439 0.3590 2.1 6tc7:AAA
38 8isk:B 848 39 0.0932 0.0177 0.3846 2.1 8isk:A
39 8uc3:A 180 63 0.0994 0.0889 0.2540 3.3 8uc3:B
40 6fht:B 735 39 0.0870 0.0190 0.3590 3.7 5ajg:A, 8avv:A, 8avv:B, 8avx:A, 8avx:B, 8bor:A, 8bor:B, 8bor:C, 8bor:D, 8c3i:B, 8c3i:A, 5c5k:A, 5c5k:B, 5c5k:C, 5c5k:D, 4cqh:A, 6fht:A, 6ftd:A, 6ftd:B, 4ijg:A, 5k5b:A, 5l8m:A, 5lbr:A, 5mg0:A, 5mg1:A, 5nfx:A, 5nm3:A, 5nm3:B, 5nm3:C, 5nm3:D, 5nwn:A, 5nwn:B, 5nwn:C, 5nwn:D, 4o01:A, 4o01:B, 4o01:C, 4o01:D, 4o0p:A, 4o0p:B, 4o8g:A, 2o9b:A, 2o9c:A, 4q0h:A, 4q0i:A, 4q0j:A, 3s7n:A, 3s7o:A, 3s7p:A, 3s7q:A, 8sgk:A, 8sgk:B, 6t3l:B, 6t3l:A, 6t3u:B, 6t3u:A, 4y3i:A, 4y5f:A, 4z1w:A, 7z9d:A, 7z9e:A, 4zrr:A, 1ztu:A
41 3rbz:A 289 50 0.1180 0.0657 0.3800 4.7 3rbz:B, 3rbz:C, 3rbz:D
42 6ato:A 221 47 0.0745 0.0543 0.2553 4.8 4acs:A, 4acs:B, 4acs:C, 4acs:D, 6ato:B, 6atr:A, 6atr:B, 7bib:A, 7bib:B, 1gse:A, 1gse:B, 1gsf:A, 1gsf:B, 1gsf:C, 1gsf:D, 1guh:A, 1guh:B, 1guh:C, 1guh:D, 4hj2:A, 4hj2:B, 3i69:A, 3i69:B, 3i69:C, 3i69:D, 3i6a:A, 3i6a:B, 3i6a:C, 3i6a:D, 3i6a:E, 3i6a:F, 3i6a:G, 3i6a:H, 3ik9:A, 3ik9:B, 3ik9:C, 3ik9:D, 3ik9:E, 3ik9:F, 3ik9:G, 3ik9:H, 5jcu:A, 5jcu:B, 5jcu:C, 5jcu:D, 1k3l:A, 1k3l:B, 1k3y:A, 1k3y:B, 3ktl:A, 3ktl:B, 3l0h:A, 3l0h:B, 1pkw:A, 1pkw:B, 1pl1:A, 1pl1:B, 1pl2:A, 1pl2:B, 2r3x:A, 2r3x:B, 2r6k:A, 2r6k:B, 1tdi:A, 1tdi:B, 1usb:A, 1usb:B, 2vct:A, 2vct:B, 2vct:C, 2vct:D, 2vcv:A, 2vcv:B, 2vcv:C, 2vcv:D, 2vcv:E, 2vcv:F, 2vcv:G, 2vcv:H, 2vcv:I, 2vcv:J, 2vcv:K, 2vcv:L, 2vcv:M, 2vcv:N, 2vcv:O, 2vcv:P, 2wju:A, 2wju:B, 2wju:C, 2wju:D, 2wju:E, 2wju:F, 2wju:G, 2wju:H, 6yaw:A, 6yaw:B, 1ydk:A, 1ydk:B
43 6oly:C 318 50 0.1180 0.0597 0.3800 5.8 2aef:A, 2aef:B, 5bkj:A, 5bkj:C, 5bkj:E, 5bkj:G, 5bkk:A, 5bkk:C, 5bkk:G, 8fz7:A, 8fz7:C, 8fz7:E, 8fz7:G, 3kxd:A, 3kxd:B, 4l73:A, 4l73:B, 4l74:A, 4l74:B, 4l75:A, 4l75:B, 4l75:C, 4l75:D, 4l75:E, 4l75:F, 4l76:A, 4l76:B, 4l76:C, 4l76:D, 4l76:E, 4l76:F, 1lnq:A, 1lnq:B, 1lnq:C, 1lnq:D, 1lnq:E, 1lnq:F, 1lnq:G, 1lnq:H, 6oly:A, 6oly:B, 6oly:D, 3rbx:A, 3rbx:B, 3rbx:C, 3rbx:D, 3rbx:E, 3rbx:F, 6u5n:A, 6u5n:E, 6u5n:B, 6u5n:F, 6u5n:C, 6u5n:G, 6u5n:D, 6u5n:H, 6u5p:A, 6u5p:E, 6u5p:B, 6u5p:F, 6u5p:C, 6u5p:G, 6u5p:D, 6u5p:H, 6u5r:A, 6u5r:B, 6u5r:C, 6u5r:D, 6u5r:E, 6u5r:F, 6u5r:G, 6u5r:H, 6uwn:A, 6uwn:E, 6uwn:B, 6uwn:F, 6uwn:C, 6uwn:G, 6uwn:D, 6uwn:H, 6ux4:A, 6ux4:E, 6ux4:B, 6ux4:F, 6ux4:C, 6ux4:G, 6ux4:D, 6ux4:H
44 5vlq:B 413 69 0.1242 0.0484 0.2899 7.4
45 6zj9:A 220 61 0.0932 0.0682 0.2459 9.3 6zjc:B, 6zjc:A, 6zjc:D, 6zjc:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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