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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
SGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTN

The query sequence (length=77) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6gd2:A 84 80 0.9870 0.9048 0.9500 6.04e-51 6g2k:A, 6g2k:B, 6gc5:A, 6gc5:B, 6gc5:C, 6gc5:D, 6gd2:B, 6gd3:B, 6gd3:C
2 2rqc:A 115 78 0.4416 0.2957 0.4359 2.17e-12
3 5m8i:A 114 81 0.4156 0.2807 0.3951 1.93e-11
4 8xxm:3G 84 73 0.3247 0.2976 0.3425 1.82e-09 5k0y:O, 8pj1:o, 8pj2:o, 8pj3:o, 8pj4:o, 8pj5:o, 8pj6:o
5 4ed5:B 169 78 0.3636 0.1657 0.3590 9.47e-08 4ed5:A
6 4ed5:B 169 64 0.2338 0.1065 0.2812 0.002 4ed5:A
7 7qde:B 169 74 0.3117 0.1420 0.3243 9.77e-08 7qdd:B
8 6r5k:H 394 75 0.3636 0.0711 0.3733 1.09e-07 6r5k:D, 6r5k:F
9 6r5k:H 394 72 0.3506 0.0685 0.3750 1.12e-05 6r5k:D, 6r5k:F
10 6r5k:H 394 71 0.2468 0.0482 0.2676 2.06e-04 6r5k:D, 6r5k:F
11 6r5k:H 394 65 0.2338 0.0457 0.2769 4.76e-04 6r5k:D, 6r5k:F
12 4f02:A 175 66 0.3377 0.1486 0.3939 1.67e-07 1cvj:A, 1cvj:B, 1cvj:C, 1cvj:D, 1cvj:E, 1cvj:F, 1cvj:G, 1cvj:H, 4f02:D
13 4f02:A 175 61 0.1948 0.0857 0.2459 7.07e-04 1cvj:A, 1cvj:B, 1cvj:C, 1cvj:D, 1cvj:E, 1cvj:F, 1cvj:G, 1cvj:H, 4f02:D
14 8i0v:4 161 78 0.3247 0.1553 0.3205 1.73e-07
15 8i0v:4 161 74 0.2727 0.1304 0.2838 8.51e-05
16 2fy1:A 108 71 0.2987 0.2130 0.3239 2.35e-07
17 7q33:A 93 77 0.2857 0.2366 0.2857 4.47e-07 6pai:D, 6q0r:D, 6q0v:D, 6q0w:D, 6sj7:C, 6ud7:C, 6ue5:C
18 2x1f:A 94 77 0.2727 0.2234 0.2727 7.73e-07 2km8:B, 2x1a:A
19 1rk8:A 87 77 0.2597 0.2299 0.2597 8.91e-07
20 7zew:A 117 75 0.2727 0.1795 0.2800 9.81e-07 7zex:A
21 2xb2:D 89 78 0.2727 0.2360 0.2692 3.07e-06 2xb2:Z
22 6m75:A 167 61 0.2727 0.1257 0.3443 4.55e-06
23 6m75:A 167 65 0.2338 0.1078 0.2769 0.006
24 8h6e:4R 106 72 0.2857 0.2075 0.3056 5.06e-06 8h6j:4R, 8qp8:R, 8qp9:R, 8qpk:R, 6qw6:R, 6qx9:R, 8qxd:R, 8r08:R, 8r0a:R
25 5mqf:o 223 74 0.2727 0.0942 0.2838 5.47e-06 6id1:y, 7w59:y, 7w5a:y, 7w5b:y
26 2mgz:A 94 74 0.3247 0.2660 0.3378 6.02e-06
27 1fnx:H 174 78 0.2987 0.1322 0.2949 7.54e-06 1fxl:A, 1g2e:A
28 1fnx:H 174 64 0.1948 0.0862 0.2344 0.087 1fxl:A, 1g2e:A
29 5ith:A 80 74 0.2597 0.2500 0.2703 1.49e-05 5o3j:A
30 4qqb:A 169 78 0.2857 0.1302 0.2821 2.02e-05 1b7f:A, 1b7f:B, 4qqb:B
31 4qqb:A 169 61 0.2338 0.1065 0.2951 7.93e-04 1b7f:A, 1b7f:B, 4qqb:B
32 2n82:B 104 67 0.3247 0.2404 0.3731 2.11e-05 2err:A, 7vrl:B
33 7dco:X 128 74 0.2468 0.1484 0.2568 2.42e-05 5gm6:V, 5zwm:X
34 2mkc:A 118 74 0.2468 0.1610 0.2568 2.73e-05 2my3:A
35 2mb0:B 95 77 0.2987 0.2421 0.2987 3.92e-05
36 7ohx:o 112 73 0.2987 0.2054 0.3151 5.03e-05
37 7b9v:Y 88 56 0.2727 0.2386 0.3750 6.11e-05 6bk8:r, 7dco:p, 6exn:Y, 6g90:Y, 5gmk:a, 6j6g:a, 6j6h:a, 6j6n:a, 6j6q:a, 5lj3:Y, 5lj5:Y, 5mq0:Y, 5nrl:Y, 7oqb:Y, 7oqe:Y, 5wsg:X, 5y88:p, 5ylz:p, 5zwm:p, 5zwo:p
38 6c0f:o 133 74 0.2987 0.1729 0.3108 6.32e-05 7btb:o, 6cb1:o, 8e5t:o, 6elz:o, 6em1:o, 6em3:o, 6em4:o, 6em5:o, 3jct:o, 6m62:o, 7nac:o, 7ohp:o, 7ohq:o, 7ohr:o, 7ohs:o, 7ohv:o, 7ohw:o, 7r6q:o, 7r7a:o, 7u0h:o, 7uoo:o, 7uqb:o, 7uqz:o, 7v08:o, 8v83:o, 8v84:o, 8v87:o, 6ylx:o, 6yly:o, 5z3g:E
39 8fkp:SH 150 75 0.2468 0.1267 0.2533 6.41e-05 8fkq:SH, 8fkr:SH, 8fks:SH, 8fkt:SH, 8fku:SH, 8fkv:SH, 8fkw:SH, 8fkx:SH, 8fky:SH, 8fkz:SH, 8fl2:SH, 8fl6:SH, 8fla:SH, 8fld:SH, 8ine:t, 8inf:t, 8ipx:t, 8ipy:t, 8ir3:t
40 7s7b:C 79 78 0.2727 0.2658 0.2692 8.03e-05 7s7b:G, 7s7c:C
41 5kw6:A 201 74 0.2987 0.1144 0.3108 1.48e-04 5kvy:A, 5kvy:B, 5kw1:A, 5kw1:B, 5kw6:B, 7q8a:B, 7q8a:A, 2qfj:A, 2qfj:B, 7z3x:A, 7z3x:B
42 5kw6:A 201 72 0.2468 0.0945 0.2639 3.43e-04 5kvy:A, 5kvy:B, 5kw1:A, 5kw1:B, 5kw6:B, 7q8a:B, 7q8a:A, 2qfj:A, 2qfj:B, 7z3x:A, 7z3x:B
43 2rra:A 99 75 0.2597 0.2020 0.2667 1.56e-04 2kxn:B
44 7dvq:Y 140 81 0.2727 0.1500 0.2593 2.18e-04 8i0p:Y, 8i0r:Y
45 5x8p:v 190 74 0.3377 0.1368 0.3514 3.32e-04 5mmj:v, 5mmm:v, 5x8r:v
46 5x8p:v 190 74 0.2597 0.1053 0.2703 0.009 5mmj:v, 5mmm:v, 5x8r:v
47 7csz:A 175 55 0.2338 0.1029 0.3273 4.73e-04
48 2i2y:A 150 61 0.2597 0.1333 0.3279 6.15e-04 9asq:H, 5bmg:A, 5bmg:B, 5bmg:H, 5bmg:D, 5bmg:E, 5bmg:F, 5bmg:G, 5bmh:A, 3v3x:C, 3v3x:D
49 5ifm:C 256 70 0.2857 0.0859 0.3143 0.003 5ifm:A
50 6n7p:A 186 73 0.2597 0.1075 0.2740 0.004 6n7r:A, 6n7x:A, 7oqc:B, 7oqe:B, 8w2o:A, 5zwn:Q
51 6g90:B 193 65 0.2338 0.0933 0.2769 0.004
52 6xlv:A 203 77 0.2857 0.1084 0.2857 0.005 5ev1:A, 5ev2:A, 5ev3:A, 5ev4:A, 2g4b:A, 2hzc:A, 7s3a:A, 7s3b:A, 7s3c:A, 4tu7:A, 4tu7:B, 4tu8:A, 4tu8:B, 4tu9:A, 4tu9:B, 3vaf:A, 3vaf:B, 3vag:A, 3vag:B, 3vah:B, 3vah:A, 3vai:A, 3vai:B, 3vaj:A, 3vaj:B, 3vak:A, 3vak:B, 3val:I, 3val:A, 3val:D, 3val:B, 3vam:A, 3vam:B, 5w0g:A, 6xlw:A, 6xlx:A, 2yh1:A
53 7uj1:B 270 73 0.2727 0.0778 0.2877 0.011 7pu5:B, 7pu5:D, 7pu5:H, 7pu5:J, 7pu5:L, 7sp0:B, 7uj1:A
54 2cjk:A 167 46 0.2208 0.1018 0.3696 0.012 2km8:C
55 5det:B 94 69 0.2468 0.2021 0.2754 0.027 5det:A
56 4bs2:A 174 50 0.2338 0.1034 0.3600 0.036 4iuf:A, 4y00:A, 4y00:B, 4y00:C, 4y00:D, 4y0f:A, 4y0f:B
57 4lmz:A 176 60 0.2078 0.0909 0.2667 0.038 3nmr:A, 3nna:A, 3nnc:A, 3nnh:A, 3nnh:C, 3nnh:B, 3nnh:D
58 4lmz:A 176 66 0.2468 0.1080 0.2879 0.14 3nmr:A, 3nna:A, 3nnc:A, 3nnh:A, 3nnh:C, 3nnh:B, 3nnh:D
59 2xs2:A 87 59 0.2208 0.1954 0.2881 0.054 2xs5:A, 2xs5:B, 2xs7:A
60 8y6o:W 167 66 0.2208 0.1018 0.2576 0.064
61 7dco:4 174 71 0.2597 0.1149 0.2817 0.066 6g90:R, 5gm6:e, 5nrl:R, 7oqb:R, 7oqe:R, 5zwm:4
62 2n3o:A 123 51 0.2597 0.1626 0.3922 0.075 2ad9:A, 8bwf:A, 8bwf:D, 8bwf:B, 8bwf:C, 8bwf:E, 8bwf:J, 8bwf:F, 8bwf:G, 8bwf:H, 8bwf:I, 8bwf:K, 8bwf:L, 8bwf:N, 8bwf:O, 8bwf:P
63 2mgz:B 105 61 0.2468 0.1810 0.3115 0.076 4ch1:A, 4cio:A, 2ru3:A
64 8by6:B 152 74 0.2468 0.1250 0.2568 0.14 7abg:A1, 6d0y:A, 1h2t:Z, 1h2u:X, 1h2u:Y, 1n52:B, 5oo6:B, 5oo6:E, 5oo6:H, 5oo6:K, 5oo6:N, 5oo6:Q, 5oo6:T, 5oo6:W, 5oob:D, 5oob:J, 5oob:B, 5oob:G, 8pmp:B, 8pnt:B, 8srr:B, 8suy:B
65 5en1:A 184 59 0.2468 0.1033 0.3220 0.18 8hni:A, 8hni:B, 8hni:G, 8hni:I, 8hni:H, 8hni:E, 8hni:K, 8hni:C, 8hni:D, 8hni:J, 8hni:F, 8hni:L, 5ho4:A, 7wm3:A, 7wm3:B, 7wm3:C, 7wm3:D, 5wwe:A, 5wwf:A, 5wwf:C, 5wwg:A
66 9gpj:A 184 57 0.2468 0.1033 0.3333 0.23 6dcl:A, 6dcl:B, 9f4d:A, 9f4e:A, 9f4f:A, 9f4g:A, 9f4h:A, 9f4j:A, 9f4k:A, 9f4l:A, 9f4m:A, 9f4n:A, 9f4o:A, 9f4p:A, 9f4q:A, 9f4r:A, 9f4s:A, 9f4t:A, 9f4u:A, 9f4v:A, 9f4w:A, 9f4x:A, 9f4y:A, 9f4z:A, 9f50:A, 9f51:A, 9f52:A, 9f53:A, 9f54:A, 9f55:A, 9f5c:A, 9f5d:A, 9f5e:A, 9f5f:A, 9f5g:A, 9f5k:A, 9f7f:A, 9f7h:A, 5mpg:A, 5mpl:A, 1pgz:A, 1po6:A, 8rzv:A, 1u1k:A, 1u1l:A, 1u1m:A, 1u1n:A, 1u1o:A, 1u1p:A, 1u1q:A, 1u1r:A, 2up1:A, 4yoe:A
67 6jvx:A 87 61 0.2468 0.2184 0.3115 0.29 6jvy:A
68 3smz:A 280 39 0.1948 0.0536 0.3846 0.35
69 3smz:A 280 58 0.2078 0.0571 0.2759 8.2
70 2rs2:A 84 50 0.2727 0.2500 0.4200 0.39
71 8ch6:V 285 66 0.2208 0.0596 0.2576 0.43 7qtt:V
72 8i0s:Y 320 66 0.2208 0.0531 0.2576 0.43 8i0t:Y, 8i0u:Y, 8i0v:Y
73 1wtb:A 79 66 0.2468 0.2405 0.2879 0.44 1x0f:A
74 8idf:A 459 66 0.2857 0.0479 0.3333 1.5
75 4a8x:A 88 63 0.1558 0.1364 0.1905 1.8
76 8pv1:CI 152 71 0.2338 0.1184 0.2535 2.5 8i9p:CI, 8i9r:CI, 8i9t:CI, 8i9v:CI, 8i9w:CI, 8i9x:CI, 8i9y:CI, 8i9z:CI, 8ia0:CI, 8pv3:CI, 8pv4:CI, 8pv7:CI, 8pvk:CI
77 7x2y:A 342 23 0.1299 0.0292 0.4348 2.8 7x1x:A, 7x1x:B, 7x2y:B
78 2adc:A 208 74 0.2857 0.1058 0.2973 3.6
79 2mxy:A 105 35 0.1429 0.1048 0.3143 4.3 2mz1:A
80 4k2m:A 442 33 0.1558 0.0271 0.3636 4.8 4k2i:A, 4k2i:B, 4k2m:B
81 2bh4:X 121 19 0.1299 0.0826 0.5263 8.2 2bgv:X, 2bh5:X
82 8gap:H 384 46 0.1818 0.0365 0.3043 9.4

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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