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BioLiP
>protein
SGEADCGLRPLFEKKSLEDKTERELLESYIDGR

The query sequence (length=33) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 5edm:A 550 33 1.0000 0.0600 1.0000 4.21e-16 5edk:A, 4o03:A
2 6bjr:A 575 33 1.0000 0.0574 1.0000 4.33e-16 2a0q:D, 1a2c:H, 2a2x:H, 5a2m:H, 1a3b:H, 1a3e:H, 1a46:H, 1a4w:H, 2a45:B, 2a45:E, 1a5g:H, 1a61:H, 1abi:H, 1abj:H, 7ac9:H, 1ad8:H, 1ae8:H, 1afe:H, 2afq:B, 2afq:D, 5af9:H, 5afy:H, 5afz:H, 1aht:H, 5ahg:H, 1ai8:H, 1aix:H, 2ank:H, 2anm:H, 8ase:H, 8ase:B, 8asf:H, 8asf:B, 1awf:H, 1awh:B, 1awh:D, 4ax9:H, 1ay6:H, 4ayv:B, 4ayy:B, 4az2:B, 3b23:B, 1b5g:H, 2b5t:B, 2b5t:D, 1b7x:B, 3b9f:H, 1ba8:B, 4bah:B, 4bak:B, 4bam:B, 4ban:B, 4bao:B, 4baq:B, 1bb0:B, 1bcu:H, 2bdy:A, 3bef:A, 3bef:B, 3bef:D, 3bef:E, 3bf6:H, 1bhx:B, 1bhx:F, 3biu:H, 3biv:H, 1bmm:H, 1bmn:H, 4boh:A, 4boh:H, 2bvr:H, 2bvs:H, 2bvx:H, 3bv9:B, 8bw5:H, 2bxt:H, 2bxu:H, 1c1u:H, 1c1v:H, 1c1w:H, 3c1k:A, 3c27:B, 6c2w:A, 6c2w:B, 1c4u:2, 1c4v:2, 1c4y:2, 1c5l:H, 1c5n:H, 1c5o:H, 2c8w:B, 2c8x:B, 2c8y:B, 2c8z:B, 2c90:B, 2c93:B, 1ca8:B, 2cf8:H, 2cf9:H, 4ch2:D, 4ch2:B, 4ch8:B, 4ch8:F, 4ch8:H, 4ch8:D, 5cmx:H, 2cn0:H, 6cym:A, 6cym:C, 1d3d:B, 1d3p:B, 1d3q:B, 1d3t:B, 1d4p:B, 3d49:H, 1d6w:A, 1d9i:A, 3da9:B, 3dd2:H, 1de7:H, 1de7:K, 3dhk:H, 1dit:H, 4dih:H, 4dii:H, 1dm4:B, 1doj:A, 5do4:L, 5do4:H, 3dt0:H, 4dt7:B, 4dt7:D, 3dux:H, 1dwb:H, 1dwc:H, 1dwd:H, 1dwe:H, 1dx5:M, 1dx5:N, 1dx5:O, 1dx5:P, 4dy7:A, 4e05:H, 4e06:H, 3e6p:H, 4e7r:H, 4e7r:G, 5e8e:H, 1eb1:H, 3egk:H, 1eoj:A, 1eol:A, 6eo6:H, 6eo7:H, 6eo8:H, 6eo9:H, 3eq0:H, 6evv:H, 5ew1:H, 5ew2:H, 3f68:H, 2feq:H, 2fes:H, 6fjt:H, 1fpc:H, 1fph:H, 1g30:B, 1g32:B, 1g37:A, 6gbw:H, 2gde:H, 5gds:H, 1ghv:H, 1ghw:H, 1ghx:H, 1ghy:H, 3gic:B, 5gim:B, 1gj4:H, 1gj5:H, 6gn7:H, 6gwe:A, 6gwe:H, 1h8d:H, 1h8i:H, 2h9t:H, 1hag:E, 1hah:H, 1hai:H, 1hao:H, 1hap:H, 3hat:H, 1hbt:H, 1hdt:H, 4hfp:B, 4hfp:D, 1hgt:H, 2hgt:H, 3hkj:B, 3hkj:E, 1hlt:H, 1hlt:K, 2hnt:C, 2hnt:E, 2hnt:F, 2hpp:H, 2hpq:H, 6hsx:H, 1hut:H, 2hwl:B, 2hwl:D, 1hxe:H, 1hxf:H, 6i51:H, 4i7y:H, 1ihs:H, 1iht:H, 5jdu:D, 5jfd:H, 2jh0:D, 2jh5:D, 2jh6:D, 1jou:B, 1jou:D, 1jou:F, 1jwt:A, 3jz2:B, 5jzy:H, 1k21:H, 1k22:H, 7kme:H, 8kme:2, 1kts:B, 1ktt:B, 5l6n:H, 5lce:H, 3ldx:H, 1lhc:H, 1lhd:H, 1lhe:H, 1lhf:H, 1lhg:H, 4loy:H, 5lpd:H, 3lu9:B, 3lu9:E, 4lxb:H, 4lz1:H, 4lz4:B, 4lz4:D, 5mjt:H, 7mj5:E, 7mj5:G, 7mj5:J, 7mj5:M, 7mj5:C, 5mls:H, 5mm6:H, 1mu6:B, 1mu8:B, 1mue:B, 5nhu:H, 5nhu:C, 5nhu:A, 1nm6:A, 1no9:H, 1nrn:H, 1nro:H, 1nrp:H, 1nrq:H, 1nrr:H, 1nrs:H, 1nt1:A, 7ntu:B, 7ntu:D, 1nu7:B, 1nu7:F, 1nu9:A, 1nu9:D, 1ny2:2, 1nzq:H, 1o0d:H, 1o2g:H, 1o5g:H, 2od3:B, 1ook:B, 1oyt:H, 3p17:H, 3p6z:B, 3p6z:H, 3p70:B, 3p70:D, 3p70:F, 3p70:H, 1p8v:C, 2pgq:A, 2pgq:B, 7phx:H, 2pks:B, 2pks:C, 3pmh:B, 3po1:B, 3po1:C, 1ppb:H, 2pw8:H, 6px5:X, 6px5:B, 6pxj:B, 1qbv:H, 3qdz:B, 3qdz:D, 3qgn:B, 1qhr:B, 1qj1:B, 1qj6:B, 1qj7:B, 3qlp:H, 3qto:H, 3qtv:H, 1qur:H, 3qwc:H, 3qx5:H, 2r2m:B, 3r3g:B, 1riw:B, 1riw:C, 4rko:B, 3rlw:H, 3rly:H, 3rm0:H, 3rm2:H, 3rml:H, 3rmm:H, 3rmn:H, 3rmo:H, 4rn6:A, 4rn6:B, 6rot:H, 3s7h:B, 1sb1:H, 1sfq:B, 1sfq:E, 1sg8:B, 1sg8:E, 1sgi:E, 1shh:B, 1shh:E, 3sha:H, 3shc:H, 3si3:H, 3si4:H, 1sl3:A, 3sv2:H, 6t3m:H, 6t3q:H, 1t4u:H, 1t4v:H, 6t4a:H, 3t5f:H, 6t52:H, 6t53:H, 6t54:H, 6t55:H, 6t56:H, 6t57:H, 6t7h:B, 6t7h:H, 6t89:H, 6t8a:H, 1ta2:A, 1ta6:A, 1tb6:H, 1tbz:H, 6tdt:H, 1thp:B, 1thr:H, 1ths:H, 2thf:B, 4thn:H, 6tkg:H, 6tkh:H, 6tki:H, 6tkj:H, 6tkl:H, 1tmb:H, 1tmt:H, 1tmu:H, 1tom:H, 1tq0:D, 1tq7:B, 8tqs:H, 3tu7:H, 1twx:B, 3u8o:H, 3u8r:H, 3u8t:H, 3u98:H, 3u9a:H, 4ud9:H, 4udw:H, 4ue7:H, 4ueh:H, 4ufd:H, 4ufe:H, 4uff:H, 4ufg:H, 1uma:H, 3utu:H, 2uuf:B, 2uuj:B, 2uuk:B, 1uvs:H, 3uwj:H, 2v3h:H, 2v3o:H, 6v64:B, 1vr1:H, 3vxe:H, 3vxf:H, 1vzq:H, 1w7g:H, 1way:B, 1wbg:B, 1xm1:A, 1xmn:F, 1xmn:H, 1xmn:D, 1xmn:B, 6y02:H, 6y9h:H, 6yb6:H, 1ycp:M, 4yes:B, 6yhg:H, 6yhj:H, 6yhj:L, 6ymp:H, 6yn3:H, 1ype:H, 1ypg:H, 1ypj:H, 1ypk:H, 1ypl:H, 1ypm:H, 6yqv:H, 6ysj:H, 6ysx:H, 6z48:H, 6z48:B, 6z48:D, 6z48:F, 1z71:A, 1z8i:B, 1z8j:B, 6z8v:H, 6z8w:H, 6z8x:H, 2zc9:H, 2zda:H, 2zdv:H, 2zf0:H, 2zff:H, 2zfp:H, 2zfq:H, 2zfr:H, 1zgi:A, 1zgv:A, 2zg0:H, 2zgb:H, 2zgx:H, 6zgo:H, 2zhe:H, 2zhf:H, 2zhq:H, 2zhw:H, 2zi2:H, 2ziq:H, 7zkl:H, 7zkm:H, 7zkn:B, 7zkn:D, 7zko:H, 2znk:H, 2zo3:H, 1zrb:A, 6zug:H, 6zuh:H, 6zun:H, 6zuu:H, 6zuw:H, 6zux:H, 6zv7:H, 6zv8:H
3 8x3a:A 151 15 0.2727 0.0596 0.6000 2.3 8x39:A, 8x39:B
4 4rqo:B 448 19 0.3030 0.0223 0.5263 6.4 2iaf:A, 2iqq:A, 2iqq:B, 4rqo:A
5 2gsd:A 399 32 0.3636 0.0301 0.3750 6.7
6 5fhd:B 400 22 0.2727 0.0225 0.4091 7.4
7 5ftc:A 431 22 0.2727 0.0209 0.4091 9.2 5fhd:A, 5fhe:A, 5fhf:A, 5ftb:A, 5fte:A, 5ftf:A, 6l3g:A, 6l3g:B
8 7y47:B 767 15 0.3030 0.0130 0.6667 9.4

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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