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BioLiP
>protein
SFTIPGLSDKKASDVADLLQKQLSTYNDLHLTLKHVHWNVVGPNFIGVHEMIDPQVELVRGYADEVAERIATLGKSPKGT
PGAIIKDRTWDDYSVERDTVQAHLAALDLVYNGVIEDTRKSIEKLEDLDLVSQDLLIAHAGELEKFQWFVRAHLESAG

The query sequence (length=158) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1vei:A 175 158 1.0000 0.9029 1.0000 1.84e-115 1uvh:A, 1uvh:B, 1uvh:C, 1uvh:D, 1veq:A, 1veq:J, 1veq:B, 1veq:C, 1veq:D, 1veq:E, 1veq:F, 1veq:L, 1veq:G, 1veq:H, 1veq:I, 1veq:K
2 7aqs:E 159 154 0.3418 0.3396 0.3506 8.26e-23 3ak9:A, 3ak9:C, 3ak9:B, 3ak9:D, 3ak9:E, 3ak9:G, 3ak9:F, 3ak9:H, 3ak9:I, 3ak9:K, 3ak9:J, 3ak9:L, 7aqs:A, 7aqs:C, 7aqs:B, 7aqs:D, 7aqs:G, 7aqs:F, 7aqs:H, 7aqs:I, 7aqs:K, 7aqs:J, 7aqs:L, 7aqs:M, 7aqs:O, 7aqs:N, 7aqs:P, 7aqs:Q, 7aqs:S, 7aqs:R, 7aqs:T, 7aqs:U, 7aqs:W, 7aqs:V, 7aqs:X, 1f30:A, 1f30:B, 1f30:E, 1f30:F, 1f30:G, 1f30:H, 1f30:I, 1f30:J
3 4dyu:H 157 138 0.3228 0.3248 0.3696 3.59e-21 4dyu:A, 4dyu:B, 4dyu:C, 4dyu:D, 4dyu:E, 4dyu:F, 4dyu:I, 4dyu:J, 4dyu:K, 4dyu:L
4 3ge4:A 161 152 0.3228 0.3168 0.3355 5.14e-18 3ge4:B, 3ge4:C, 3ge4:D, 3ge4:E, 3ge4:F, 3ge4:G, 3ge4:H, 3ge4:I, 3ge4:J, 3ge4:K, 3ge4:L
5 4a25:B 169 132 0.2911 0.2722 0.3485 8.52e-17 4a25:A, 4a25:C, 4a25:D
6 2yjj:G 157 121 0.2595 0.2611 0.3388 5.43e-15 2yjj:A, 2yjj:B, 2yjj:C, 2yjj:I, 2yjj:D, 2yjj:J, 2yjj:E, 2yjj:F, 2yjj:H, 2yjj:K, 2yjj:L, 2yjk:A, 2yjk:B, 2yjk:C, 2yjk:I, 2yjk:D, 2yjk:J, 2yjk:E, 2yjk:F, 2yjk:G, 2yjk:H, 2yjk:K, 2yjk:L
7 1jig:A 146 144 0.2532 0.2740 0.2778 8.08e-14 1jig:B, 1jig:C, 1jig:D
8 1ji5:A 142 141 0.2532 0.2817 0.2837 2.89e-12 1ji5:B, 1ji5:C, 1ji5:D
9 1n1q:A 149 146 0.2975 0.3154 0.3219 4.18e-12 1n1q:B, 1n1q:C, 1n1q:D
10 4m33:A 161 139 0.2722 0.2671 0.3094 4.37e-12 4m32:A, 4m32:B, 4m32:C, 4m32:D, 4m33:B, 4m33:C, 4m33:D, 4m34:A, 4m34:B, 4m34:C, 4m34:D, 4m35:A, 4m35:B, 4m35:C, 4m35:D, 5ww3:A, 5ww3:B, 5ww3:C, 5ww3:D, 5ww4:A, 5ww4:B, 5ww4:C, 5ww4:D, 5ww5:A, 5ww5:C, 5ww5:B, 5ww6:A, 5ww6:B, 5ww6:C, 5ww6:D, 5ww7:A, 5ww7:C, 5ww7:B, 5ww7:D, 5ww8:A, 5ww8:B, 5ww8:C, 5ww8:D, 5ww9:A, 5ww9:B, 5ww9:C, 5ww9:D, 2z90:A, 2z90:B, 2z90:C, 2z90:D
11 2c2f:A 178 153 0.2785 0.2472 0.2876 3.26e-11 2c2u:A, 2f7n:A
12 2bw1:G 165 158 0.2848 0.2727 0.2848 1.43e-10 2bw1:C, 2bw1:D, 2bw1:A, 2bw1:B, 2bw1:H, 2bw1:E, 2bw1:F, 2bw1:K, 2bw1:L, 2bw1:I, 2bw1:J, 1umn:K, 2ux1:A, 2ux1:B, 2ux1:C, 2ux1:D, 2ux1:E, 2ux1:F, 2ux1:G, 2ux1:H, 2ux1:I, 2ux1:J, 2ux1:K, 2ux1:L, 2v15:A, 2v15:B, 2v15:C, 2v15:D, 2v15:E, 2v15:F, 2v15:G, 2v15:H, 2v15:I, 2v15:J, 2v15:K, 2v15:L, 2xjm:A, 2xjm:B, 2xjm:C, 2xjm:D, 2xjm:E, 2xjm:F, 2xjm:G, 2xjm:H, 2xjm:I, 2xjm:J, 2xjm:K, 2xjm:L, 2xjn:A, 2xjn:C, 2xjn:D, 2xjn:E, 2xjn:F, 2xjn:G, 2xjn:H, 2xjn:I, 2xjn:J, 2xjn:K, 2xjn:L, 2xkq:A, 2xkq:B, 2xkq:C, 2xkq:D, 2xkq:E, 2xkq:F, 2xkq:G, 2xkq:H, 2xkq:I, 2xkq:J, 2xkq:K, 2xkq:L
13 6hx2:B 156 149 0.2595 0.2628 0.2752 2.37e-10 6hui:D, 6hui:A, 6hui:B, 6hui:C, 6hui:E, 6hui:F, 6hx2:A, 6hx2:C, 6hx2:D, 6hx2:E, 6hx2:F, 2iy4:B, 2iy4:C, 2iy4:D, 2iy4:E, 2iy4:G, 2iy4:F, 2iy4:H, 2iy4:I, 2iy4:J, 2iy4:K, 2iy4:L, 2iy4:M, 2iy4:O, 2iy4:N, 2iy4:P, 2iy4:Q, 2iy4:S, 2iy4:R, 2iy4:T, 2iy4:U, 2iy4:X, 2iy4:V, 2iy4:Y, 1qgh:E, 1qgh:G, 1qgh:A, 1qgh:C, 1qgh:I, 1qgh:K, 1qgh:F, 1qgh:H, 1qgh:J, 1qgh:L, 1qgh:B, 1qgh:D, 6sev:A, 6sev:B, 6sev:D, 6sev:E
14 2c2j:A 165 140 0.2532 0.2424 0.2857 1.72e-09 2c6r:A, 6tb5:A, 6tgt:A
15 2wlu:A 166 120 0.2405 0.2289 0.3167 5.14e-09
16 8ffd:B 156 78 0.1646 0.1667 0.3333 6.23e-08 8ffb:A, 8ffb:B, 8ffb:L, 8ffb:C, 8ffb:D, 8ffb:E, 8ffb:F, 8ffb:G, 8ffb:I, 8ffb:H, 8ffb:J, 8ffb:K, 8ffc:A, 8ffc:E, 8ffc:B, 8ffc:L, 8ffc:C, 8ffc:J, 8ffc:D, 8ffc:F, 8ffc:G, 8ffc:I, 8ffc:H, 8ffc:K, 8ffc:M, 8ffc:N, 8ffc:O, 8ffc:P, 8ffd:A, 8ffd:C, 8ffd:D, 8ffd:E, 8ffd:F, 8ffd:G, 8ffd:H, 8ffd:I, 8ffd:J, 8ffd:K, 8ffd:L, 8ffd:M, 8ffd:N, 8ffd:O, 8ffd:P
17 1moj:A 180 118 0.2278 0.2000 0.3051 2.07e-06 1moj:B, 1moj:C, 1moj:D, 1tjo:A, 1tjo:B, 1tjo:C, 1tjo:D, 1tk6:A, 1tk6:B, 1tk6:C, 1tk6:D, 1tko:A, 1tko:B, 1tko:C, 1tko:D, 1tkp:A, 1tkp:B, 1tkp:D, 1tkp:C
18 1ji4:A 144 58 0.1329 0.1458 0.3621 2.41e-05 4evb:A, 4evc:A, 1ji4:D, 1ji4:B, 1ji4:C, 1ji4:E, 1ji4:H, 1ji4:F, 1ji4:G, 1ji4:I, 1ji4:L, 1ji4:J, 1ji4:K
19 2fjc:B 156 71 0.1329 0.1346 0.2958 3.66e-05 2fjc:A, 2fjc:D, 2fjc:C, 2fjc:E, 2fjc:H, 2fjc:F, 2fjc:G, 2fjc:I, 2fjc:L, 2fjc:J, 2fjc:K, 2fjc:M, 2fjc:N, 2fjc:O, 2fjc:P
20 4cyb:J 173 142 0.2468 0.2254 0.2746 1.61e-04 4cyb:A, 4cyb:B, 4cyb:C, 4cyb:D, 4cyb:E, 4cyb:F, 4cyb:G, 4cyb:H, 4cyb:I, 4cyb:K, 4cyb:L
21 2pyb:A 151 143 0.2089 0.2185 0.2308 2.25e-04 2pyb:B, 2pyb:C, 2pyb:D
22 5lbh:A 143 145 0.2405 0.2657 0.2621 2.44e-04 5lbh:J, 5lbh:B, 5lbh:C, 5lbh:D, 5lbh:G, 5lbh:E, 5lbh:F, 5lbh:L, 5lbh:H, 5lbh:I, 5lbh:K
23 6lkp:C 172 72 0.1266 0.1163 0.2778 7.47e-04 6lkp:A, 6lkp:B, 6lkp:D, 6lkp:E, 6lkp:F
24 3kwo:A 149 75 0.1329 0.1409 0.2800 0.001 3kwo:B, 3kwo:C, 3kwo:D
25 5hjh:D 178 109 0.1835 0.1629 0.2661 0.001 5hjh:A, 5hjh:B, 5hjh:C, 5i4j:A, 5i4j:B, 5i4j:C, 5i4j:D
26 2vxx:B 173 75 0.1076 0.0983 0.2267 0.044 2vxx:A, 2vxx:D, 2vxx:C
27 3poy:A 1005 89 0.1519 0.0239 0.2697 0.33 3asi:A, 3b3q:E, 3b3q:F, 3biw:E, 3biw:F, 3biw:G, 3bod:A, 2h0b:A, 2h0b:B, 2h0b:C, 2h0b:D, 2r16:A, 2r1d:H, 2r1d:B, 2r1d:D, 2r1d:I, 3vkf:C, 3vkf:D, 2wqz:C, 2wqz:D, 2xb6:C, 2xb6:D, 5z8y:B, 5z8y:D, 5z8y:F, 5z8y:H
28 2y6e:B 339 99 0.1646 0.0767 0.2626 0.78 2y6e:A, 2y6e:C, 2y6e:E, 2y6e:F
29 5o25:B 323 133 0.2152 0.1053 0.2556 0.82 5o1u:A, 5o1u:B, 5o25:A, 5o4z:A, 5o58:A, 5o70:A, 5o7f:A, 5o7f:B
30 2yy8:A 174 53 0.1013 0.0920 0.3019 2.2 2yy8:B
31 1k7w:D 450 71 0.1582 0.0556 0.3521 2.3 1dcn:D, 1hy0:A, 1hy0:B, 1k7w:A, 1k7w:C, 1k7w:B, 1tjw:A, 1tjw:B, 1tjw:C, 1tjw:D
32 6s6q:A 833 44 0.1203 0.0228 0.4318 5.5 6s6q:B
33 6tzk:A 451 30 0.0823 0.0288 0.4333 8.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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