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BioLiP
>protein
SFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKG

The query sequence (length=46) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 2c6a:A 46 46 1.0000 1.0000 1.0000 1.33e-29 2c6b:A, 4xxb:B
2 2cr8:A 53 32 0.3261 0.2830 0.4688 1.09e-06
3 3irb:A 137 31 0.2174 0.0730 0.3226 0.16 3irb:B
4 2ayj:A 56 35 0.2609 0.2143 0.3429 0.25
5 5m60:A 755 36 0.2826 0.0172 0.3611 0.40
6 1nj3:A 31 25 0.2174 0.3226 0.4000 0.65 1q5w:A
7 8hfc:A 276 18 0.1957 0.0326 0.5000 0.86
8 8hf3:A 295 18 0.1739 0.0271 0.4444 2.0
9 7yet:A 999 23 0.1739 0.0080 0.3478 2.1
10 7yes:A 1369 23 0.1739 0.0058 0.3478 2.3 8jsl:A, 8jsm:A, 8jsn:A, 7yer:A
11 5xoo:B 351 43 0.3478 0.0456 0.3721 3.0 5xoo:A
12 7pvn:B 990 30 0.2174 0.0101 0.3333 3.8 7sol:C
13 7sol:A 1011 30 0.2174 0.0099 0.3333 3.9 7pvn:A
14 3a9j:C 32 24 0.1739 0.2500 0.3333 4.6 9avt:C, 9avw:C, 7e62:C, 7e62:J, 2wwz:C, 2wx0:C, 2wx0:G, 2wx1:C
15 7ajt:UM 762 27 0.2609 0.0157 0.4444 4.8 7aju:UM, 7d4i:B3, 7d5s:B3, 7d5t:B3, 7d63:B3, 6ke6:B3, 6lqp:B3, 6lqq:B3, 6lqr:B3, 6lqs:B3, 6lqt:B3, 6lqu:B3, 6lqv:B3, 7suk:LR, 6zqa:UM, 6zqb:UM, 6zqc:UM, 6zqd:UM, 6zqf:UM
16 2k1p:A 33 25 0.2174 0.3030 0.4000 5.7
17 5wyj:BC 783 27 0.2609 0.0153 0.4444 6.4 5wyk:BC
18 2vr0:F 146 29 0.2609 0.0822 0.4138 6.6 2j7a:C, 2j7a:F, 2j7a:I, 2j7a:L, 2j7a:O, 2j7a:R, 2vr0:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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