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BioLiP
>protein
SENLYFQGSASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFA

The query sequence (length=72) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3f6q:B 72 72 1.0000 1.0000 1.0000 6.95e-49 4hi8:B, 4hi9:B
2 1g47:A 70 63 0.8750 0.9000 1.0000 3.53e-42 2kbx:B
3 3ixe:B 70 70 0.8194 0.8429 0.8429 8.82e-41
4 2d8y:A 91 71 0.3194 0.2527 0.3239 1.01e-08
5 1x3h:A 80 50 0.2639 0.2375 0.3800 1.05e-07
6 2mbv:A 96 57 0.2500 0.1875 0.3158 1.18e-06
7 7qb0:A 127 43 0.2500 0.1417 0.4186 1.83e-06
8 7qb0:A 127 63 0.3333 0.1890 0.3810 1.70e-04
9 2dfy:X 158 57 0.2500 0.1139 0.3158 2.42e-06 2dfy:C, 1rut:X
10 2lzu:A 72 65 0.2639 0.2639 0.2923 5.60e-06
11 1x4k:A 72 55 0.2222 0.2222 0.2909 5.75e-05
12 7lt9:B 131 47 0.2500 0.1374 0.3830 8.36e-05 7d2s:B, 7d2t:B, 7d2t:D, 7d2u:B, 1nyp:A, 1u5s:B
13 1v6g:A 81 36 0.2083 0.1852 0.4167 1.10e-04
14 1cxx:A 59 51 0.2361 0.2881 0.3333 1.66e-04 1ibi:A, 1qli:A
15 1b8t:A 192 55 0.2361 0.0885 0.3091 3.87e-04 1ctl:A
16 6cme:A 154 57 0.2639 0.1234 0.3333 5.40e-04 6cme:B, 3mmk:A, 3mmk:B
17 1x64:A 89 51 0.2361 0.1910 0.3333 5.57e-04
18 1iml:A 76 38 0.1944 0.1842 0.3684 0.001
19 6u4m:A 65 65 0.2639 0.2923 0.2923 0.001 6u4n:B
20 1wyh:A 72 50 0.2083 0.2083 0.3000 0.003
21 2rgt:B 154 57 0.2500 0.1169 0.3158 0.004 2rgt:A
22 2jtn:A 182 57 0.2500 0.0989 0.3158 0.005
23 2dlo:A 81 64 0.2639 0.2346 0.2969 0.006
24 2o13:A 58 51 0.2222 0.2759 0.3137 0.006
25 1x61:A 72 32 0.1944 0.1944 0.4375 0.006
26 4jcj:C 150 39 0.1667 0.0800 0.3077 0.007 4jcj:A, 4jcj:B
27 4jcj:C 150 39 0.1667 0.0800 0.3077 0.56 4jcj:A, 4jcj:B
28 1x63:A 82 62 0.2361 0.2073 0.2742 0.018
29 2cup:A 101 55 0.1944 0.1386 0.2545 0.022
30 2cu8:A 76 53 0.2222 0.2105 0.3019 0.056
31 2d8z:A 70 69 0.2917 0.3000 0.3043 0.061
32 2cur:A 69 60 0.2500 0.2609 0.3000 0.22
33 2lxd:A 123 58 0.2222 0.1301 0.2759 0.29 2l6y:B, 2l6z:C
34 2egq:A 77 58 0.2083 0.1948 0.2586 0.35
35 1hfe:L 396 61 0.2500 0.0455 0.2951 0.35 8bj7:A, 8bj8:A, 1e08:A, 1gx7:A, 1hfe:M, 6sg2:AAA
36 7aih:Ax 167 38 0.1389 0.0599 0.2632 0.48 7am2:Ax, 7ane:Ax
37 4fio:A 321 33 0.2083 0.0467 0.4545 0.70 4fio:B
38 2miu:A 98 58 0.2222 0.1633 0.2759 0.77
39 2o10:A 60 53 0.2222 0.2667 0.3019 0.83
40 4kfz:B 148 58 0.2222 0.1081 0.2759 1.0 4kfz:A, 2xjy:A, 2xjz:A, 2xjz:B, 2xjz:C, 2xjz:D, 2xjz:E, 2ypa:C
41 1wig:A 73 27 0.1250 0.1233 0.3333 1.2
42 8btt:B 484 40 0.1944 0.0289 0.3500 2.1
43 1zbd:B 124 47 0.2083 0.1210 0.3191 3.3
44 6yxy:BX 133 37 0.1389 0.0752 0.2703 3.3 7aoi:BX, 6hiv:BX, 6hix:BX
45 4pxq:A 516 38 0.2083 0.0291 0.3947 3.9 4pxq:B
46 3s2z:A 251 14 0.1389 0.0398 0.7143 3.9 3pfb:A, 3pfb:B, 3pfc:A, 3qm1:A, 3s2z:B
47 7cxz:A 245 21 0.1528 0.0449 0.5238 4.8
48 2cuq:A 80 59 0.2222 0.2000 0.2712 5.6
49 1x62:A 79 51 0.1806 0.1646 0.2549 5.7
50 5y5w:B 195 21 0.1528 0.0564 0.5238 5.7 7ea1:C, 6i8b:B, 6i8b:E, 6i8l:B, 6i8y:A, 6qpl:B
51 6sjv:A 529 56 0.2361 0.0321 0.3036 6.6 6sqc:A
52 7xri:A 256 17 0.1667 0.0469 0.7059 6.9 7xri:B, 7xri:C, 7xri:D
53 2xqn:T 125 55 0.1944 0.1120 0.2545 7.4 2iyb:E, 2iyb:F, 2iyb:G, 2iyb:H
54 6iso:I 248 32 0.1667 0.0484 0.3750 7.5
55 8bbk:A 274 32 0.1667 0.0438 0.3750 7.6 8bbk:B, 8bbk:C, 8bbk:D, 8bbk:E, 8bbk:F, 4bn4:A, 4bn5:A, 4bn5:B, 4bn5:C, 4bn5:D, 4bn5:E, 4bn5:F, 4bn5:G, 4bn5:H, 4bn5:I, 4bn5:J, 4bn5:K, 4bn5:L, 4bv3:A, 4bvb:A, 4bve:A, 4bvf:A, 4bvg:A, 4bvh:A, 4bvh:B, 4bvh:C, 5bwn:A, 5bwo:A, 4c78:A, 4c7b:A, 9cbt:A, 9cbt:B, 8ccw:A, 8ccz:A, 8ccz:B, 5d7n:A, 5d7n:B, 5d7n:C, 5d7n:D, 5d7n:E, 5d7n:F, 4fvt:A, 4fz3:A, 3glr:A, 3gls:A, 3gls:B, 3gls:C, 3gls:D, 3gls:E, 3gls:F, 3glt:A, 3glu:A, 5h4d:H, 5h4d:A, 4hd8:A, 8hlw:A, 8hly:A, 8hn9:A, 8hn9:B, 6iso:A, 6iso:B, 6iso:E, 6iso:G, 4jsr:A, 4jt8:A, 4jt9:A, 4o8z:A, 8v15:A, 8v15:C, 8v2n:A, 5y4h:A, 5ytk:A, 5ytk:D, 5ytk:E, 5ytk:F, 5ytk:B, 5ytk:C, 5z93:A, 5z94:A, 5z94:B, 5zgc:A, 5zgc:B, 5zgc:C, 5zgc:E, 5zgc:D
56 6qwi:A 448 17 0.1250 0.0201 0.5294 8.0 1bgg:B, 1bgg:C, 1bgg:D, 1e4i:A, 6qwi:B, 6r4k:A, 6r4k:B, 1uyq:A
57 1q7t:A 310 13 0.1250 0.0290 0.6923 8.3 4ewl:A, 4ewl:B, 1q74:A, 1q74:B, 1q74:C, 1q74:D, 1q7t:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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