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BioLiP
>protein
SEELEKALSKLSEREAMVLKLRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKLKYH

The query sequence (length=61) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7rdq:F 349 61 0.9836 0.1719 0.9836 9.86e-35 2a68:F, 2a68:P, 2a69:F, 2a69:P, 6cuu:F, 5d4c:F, 5d4c:P, 5d4d:F, 5d4d:P, 5d4e:F, 5d4e:P, 5e17:F, 5e18:F, 7eh0:F, 7eh1:F, 7eh2:F, 7eh2:P, 4g7h:F, 4g7h:P, 4g7o:F, 4g7o:P, 4g7z:F, 4g7z:P, 5i2d:F, 5i2d:Q, 1iw7:F, 1iw7:P, 4ki2:A, 4ki2:B, 6kqd:F, 6kqd:P, 6kqe:F, 6kqf:F, 6kqg:F, 6kqh:F, 6kql:F, 6kqm:F, 6kqn:F, 1ku7:A, 6l74:F, 6lts:F, 7mlb:F, 7mli:F, 7mlj:F, 3n97:A, 4oin:F, 4oio:F, 4oip:F, 4oiq:F, 4oir:F, 6ovr:F, 6ovy:F, 6ow3:F, 6oy5:F, 6oy6:F, 6oy7:F, 6p70:F, 6p71:F, 4q4z:F, 4q5s:F, 1rio:H, 1smy:F, 5tjg:F, 3ugo:A, 3ugp:A, 5vo8:F, 5voi:F, 8w8n:F, 8w8o:F, 8w8p:F, 6wox:F, 6woy:F, 5x21:F, 5x22:F, 5x22:P, 4xln:F, 4xln:L, 4xlp:F, 4xlp:L, 4xlq:F, 4xlq:L, 4xlr:F, 4xlr:L, 4xls:F, 4xls:L
2 7ckq:F 272 59 0.6557 0.1471 0.6780 1.04e-18 7f75:F, 8x6f:E
3 7ckq:F 272 23 0.1639 0.0368 0.4348 7.4 7f75:F, 8x6f:E
4 8cwr:B 109 59 0.5410 0.3028 0.5593 3.94e-18 8cwt:B, 8cwt:D, 8cwt:F, 8cyf:B, 7kuf:B
5 8h3v:G 314 59 0.6557 0.1274 0.6780 5.03e-18 8h40:G
6 8gzg:F 314 59 0.6393 0.1242 0.6610 2.19e-17 8gzh:F
7 7l7b:F 272 59 0.6393 0.1434 0.6610 4.10e-17
8 6bzo:F 326 59 0.5410 0.1012 0.5593 1.80e-16 6c04:F, 6cce:F, 6ccv:F, 6dcf:F, 6edt:F, 6ee8:F, 6eec:F, 6fbv:F, 8hih:F, 7kif:F, 7kim:F, 7kin:F, 6m7j:F, 6ono:B, 6ono:D, 6onu:B, 6onu:D, 6onu:F, 6onu:H, 7p5x:AF, 5tw1:F, 7u22:F, 5uh5:F, 5uh6:F, 5uh8:F, 5uh9:F, 5uha:F, 5uhb:F, 5uhc:F, 5uhd:F, 5uhe:F, 5uhf:F, 5uhg:F, 5vi5:F, 5vi8:F, 6vvs:F, 6vvt:F, 6vvv:F, 6vvx:F, 6vvy:F, 6vvz:F, 6vw0:F
9 8k60:F 315 59 0.5410 0.1048 0.5593 5.99e-16 8dy7:F, 8dy9:F, 8hvr:F, 8jke:F, 7vpd:F, 7vpz:F, 7x74:F, 7x75:F, 7x76:F
10 6wmr:Z 470 50 0.5574 0.0723 0.6800 3.80e-14 6wmt:Z
11 3iyd:F 479 53 0.5410 0.0689 0.6226 4.81e-14
12 7ye1:F 497 59 0.5574 0.0684 0.5763 6.03e-14 7ye2:F, 5yix:A
13 6n4c:F 558 54 0.5246 0.0573 0.5926 3.34e-13 8ad1:F, 6b6h:F, 7bef:F, 7beg:F, 7c17:F, 7c97:F, 6ca0:F, 7chw:F, 7dy6:F, 8ftd:L, 6jnx:F, 8jo2:F, 6k4y:F, 7khb:F, 7khc:F, 7khe:F, 7khi:F, 6ldi:F, 7mkd:L, 7mke:L, 7mki:L, 7mkj:L, 7n4e:F, 6n57:L, 6n62:F, 6oul:L, 6p18:F, 2p7v:B, 6pb4:F, 6pb5:F, 6pb6:F, 6psq:L, 6pss:L, 6pst:L, 6psu:L, 6psv:L, 6psw:L, 7szj:F, 8to1:L, 8to6:L, 8to8:L, 8toe:L, 8tom:L, 5vt0:L, 7vwy:F, 7vwz:F, 7w5w:F, 7w5x:F, 7w5y:F, 6wmu:F, 6xh7:F, 6xh8:F, 6xl5:F, 6xl9:F, 6xlj:F, 6xll:F, 8y6u:F, 4yln:F, 4yln:L, 4yln:R, 4ylo:F, 4ylo:L, 4ylo:R, 4ylp:F, 4ylp:L, 4ylp:R
14 4kn7:X 517 54 0.5246 0.0619 0.5926 3.40e-13
15 6psr:L 548 54 0.5246 0.0584 0.5926 3.58e-13 6n58:L, 6n61:F
16 6n60:F 318 54 0.5246 0.1006 0.5926 3.82e-13 8igr:L, 8igs:L
17 8u3b:F 431 54 0.5246 0.0742 0.5926 4.34e-13
18 7ubm:F 353 48 0.4918 0.0850 0.6250 7.16e-12 7ubn:F
19 7f0r:F 278 59 0.4098 0.0899 0.4237 7.01e-08
20 6ido:A 86 54 0.3934 0.2791 0.4444 1.18e-06 6ido:B
21 6omf:F 278 54 0.3934 0.0863 0.4444 3.93e-06 5ipl:F, 5ipm:F, 5ipn:F, 6kj6:F, 6utv:FFF, 6utw:FFF, 6utx:FFF, 6uty:FFF, 6utz:FFF, 6uu0:FFF, 6uu1:FFF, 6uu2:FFF, 6uu3:FFF, 6uu4:FFF, 6uu5:FFF, 6uu6:FFF, 6uu7:FFF, 6uu8:FFF, 6uu9:FFF, 6uua:FFF, 6uub:FFF, 6uuc:FFF
22 8hkc:E 262 56 0.3279 0.0763 0.3571 8.96e-05
23 6pfv:G 223 56 0.3443 0.0942 0.3750 0.004 6pfj:A, 6pfv:A, 6pfv:D
24 7lq4:A 192 58 0.3607 0.1146 0.3793 0.24
25 1v29:A 203 33 0.2131 0.0640 0.3939 1.4 2dpp:A, 3hht:A, 7qom:A, 7qop:A, 7qou:A, 7qov:A, 7qoy:A, 7z0v:A
26 5jrj:A 306 51 0.2951 0.0588 0.3529 1.7
27 6tr4:A 506 34 0.1967 0.0237 0.3529 2.5 6tr3:A, 6tr4:B
28 8vzl:A 646 37 0.2459 0.0232 0.4054 4.0 9bs3:A, 9bs3:E, 9bs4:A, 9bs4:E, 7kr3:A, 7kr4:A, 7l34:A, 7l35:A, 6p09:A, 6p0a:A, 6p0b:A, 6p0c:A, 6p0d:A, 6p0e:A, 6q1v:A, 7qnz:A, 7qo1:A, 7sum:A, 7sx5:A, 7sxe:A, 8vdn:A, 8vds:A, 8vdt:A, 8vzm:A, 1x9n:A
29 5vg3:A 382 30 0.2295 0.0366 0.4667 8.7 5hi0:A, 1j58:A, 1l3j:A, 4met:A, 4met:B, 4met:C, 4met:D, 3s0m:A, 6tzp:A, 6ufi:A, 1uw8:A, 2uy8:A, 2uy9:A, 2uya:A, 2uyb:A, 2v09:A, 5vg3:B, 5vg3:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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