BioLiP

>protein
SDFLLKEPTEPKFKGLRLELAVDKMVTCIAVGLPLLLISLAFAQEISIGTQISCFSPSSFSWRQAAFVDSYCWAAVQQKN
SLQSGNLPLWLHKFFPYILLLFAILLYLPPLFWRFAAAPHICSDLKFIMEELDKVYNRAIKAAKSAKYPIVEQYLKTKKN
SNNLIIKYISCRLLTLIIILLACIYLGYYFSLSSLSDEFVCSIKSGILRNDSTVPDQFQCKLIAVGIFQLLSVINLVVYV
LLAPVVVYTLFVPFRQKTDVLKVYEILPTFLHFKSEGYNDLSLYNLFLEENISEVKSYKCLKVLENIKS

The query sequence (length=309) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	6wbf:A	344	316	1.0000	0.8983	0.9778	0.0	7f8j:A, 7f8j:G, 7f8j:B, 7f8j:C, 7f8j:D, 7f8j:E, 7f8j:F, 7f8n:A, 7f8n:B, 7f8n:C, 7f8n:D, 7f8n:E, 7f8n:F, 7f8n:G, 7f8o:A, 7f8o:B, 7f8o:C, 7f8o:D, 7f8o:E, 7f8o:F, 7f8o:G, 8gyo:A, 8gyo:B, 8gyo:D, 8gyo:E, 8gyo:F, 6wbf:B, 6wbf:C, 6wbf:D, 6wbf:E, 6wbf:F, 6wbf:G, 6wbg:A, 6wbg:B, 6wbg:C, 6wbg:D, 6wbg:E, 6wbg:F, 6wbg:G
2	6uzy:A	278	297	0.6634	0.7374	0.6902	4.91e-140	6uzy:B, 6uzy:C, 6uzy:D, 6uzy:E, 6uzy:F, 6uzy:G
3	8fkp:SS	235	49	0.0518	0.0681	0.3265	0.070	8fkq:SS, 8fkr:SS, 8fks:SS
4	3cjp:A	262	21	0.0356	0.0420	0.5238	0.73	3cjp:B
5	8w9o:A	427	34	0.0453	0.0328	0.4118	4.2	8w9o:B
6	7xzh:B	730	210	0.1424	0.0603	0.2095	7.7	7m19:C, 7xzh:A, 7xzh:C, 7xzh:D, 7xzh:E, 7xzh:F
7	7ui4:A	413	55	0.0550	0.0412	0.3091	9.6

[Back]