Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
SATPHLDAVEQTLRQVSPGLEGDVWERTSGNKLDGSAADPSDWLLQTPGCWGDDKCADRVGTKRLLAKMTENIGNATRTV
DISTLAPFPNGAFQDAIVAGLKESAAKGNKLKVRILVGAAVIPSKYRDELTAKLGKAAENITLNVASMTTSKTAFSWNHS
KILVVDGQSALTGGINSWKDDYLDTTHPVSDVDLALTGPAAGSAGRYLDTLWTWTCQNKSNIASVWFAASGNAGCMPTMH
KDTNPKASPATGNVPVIAVGGLGVGIKDVDPKSTFRPDLPTASDTKCVVGLHDNTNADRDYDTVNPEESALRALVASAKG
HIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGVKVRIVVSDPANRGYSQIKSLSEISDTLRNRLANITGGQQAAKTAM
CSNLQLATFRSSPNGKWADGHPYAQHHKLVSVDSSTFYIGSKNLYPSWLQDFGYIVESPEAAKQLDAKLLDPQWKYSQET
ATVDYARGICN

The query sequence (length=491) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1v0w:A 496 495 1.0000 0.9899 0.9919 0.0 1v0r:A, 1v0t:A, 1v0u:A, 1v0v:A, 1v0y:A
2 7jrc:A 501 493 0.7128 0.6986 0.7099 0.0 7jru:A, 7jrv:A, 7jrw:A, 7js5:A, 7js7:A, 7js7:B
3 6ohr:A 576 94 0.0489 0.0417 0.2553 1.2 6ohr:B, 6ohr:C, 6ohr:D, 6ohr:E, 6u8z:A
4 6ohr:F 526 94 0.0489 0.0456 0.2553 1.2
5 8uu9:3 70 39 0.0305 0.2143 0.3846 2.9
6 5dte:B 287 96 0.0672 0.1150 0.3438 3.7 5dte:A, 5dte:C, 5dte:D
7 1mc3:A 291 37 0.0265 0.0447 0.3514 3.8 1mc3:B
8 7d8m:A 451 56 0.0407 0.0443 0.3571 3.9
9 2y0c:A 461 31 0.0204 0.0217 0.3226 4.0 2y0c:B, 2y0c:C, 2y0c:D, 2y0d:A, 2y0d:B, 2y0d:C, 2y0d:D, 2y0e:A, 2y0e:B, 2y0e:C, 2y0e:D
10 2j4k:C 206 60 0.0346 0.0825 0.2833 4.0 2j4l:H
11 7nhn:4 79 39 0.0305 0.1899 0.3846 6.1 8a57:4, 8a5i:4, 8a63:4, 8uu4:3, 8uu5:3, 8uu6:3, 8uu7:3, 8uu8:3, 8uua:3
12 6hrh:A 429 36 0.0346 0.0396 0.4722 7.6 6hrh:B, 5qqq:B, 5qqq:A, 5qqr:B, 5qqr:A, 5qqs:B, 5qqs:A, 5qqt:B, 5qqt:A, 5qqu:B, 5qqu:A, 5qqv:B, 5qqv:A, 5qqw:B, 5qqw:A, 5qqx:B, 5qqx:A, 5qqy:B, 5qqy:A, 5qqz:B, 5qqz:A, 5qr0:B, 5qr0:A, 5qr1:B, 5qr1:A, 5qr2:B, 5qr2:A, 5qr3:B, 5qr3:A, 5qr4:B, 5qr4:A, 5qr5:B, 5qr5:A, 5qr6:B, 5qr6:A, 5qr7:B, 5qr7:A, 5qr8:B, 5qr8:A, 5qr9:B, 5qr9:A, 5qra:B, 5qra:A, 5qrb:B, 5qrb:A, 5qrc:B, 5qrc:A, 5qrd:B, 5qrd:A, 5qre:B, 5qre:A, 5qt3:B, 5qt3:A
13 8ap0:AAA 332 53 0.0305 0.0452 0.2830 7.7 8aoz:AAA, 6yqq:A
14 6els:A 459 107 0.0468 0.0501 0.2150 7.9 6elt:A, 6elv:A
15 7lxi:A 279 59 0.0265 0.0466 0.2203 8.6 7mcj:A, 7mcj:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218