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BioLiP
>protein
SAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQ

The query sequence (length=35) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 6jzd:B 35 35 1.0000 1.0000 1.0000 6.31e-19 6jze:B
2 8toc:a 534 31 0.2571 0.0169 0.2903 4.6 8toc:b
3 5nno:A 484 33 0.3143 0.0227 0.3333 5.7 5nno:B
4 8pdg:AAA 462 25 0.2286 0.0173 0.3200 6.3 8pdh:AAA, 8pdi:A, 8pdj:AAA, 5rw2:A, 5rw4:A, 5rw5:A, 5rw6:A, 5rw7:A, 5rw8:A, 5rw9:A, 5rwa:A, 5rwb:A, 5rwc:A, 5rwd:A, 5rwe:A, 5rwf:A, 5rwg:A, 5rwh:A, 5rwj:A, 5rwk:A, 5rwl:A, 5rwn:A, 5rwp:A, 5rwq:A, 5rwr:A, 5rws:A, 5rwt:A, 5rwu:A, 5rwv:A, 5rww:A, 5rwx:A, 5rwy:A, 5rwz:A, 5rx0:A, 5rx1:A, 5rx2:A, 5rx3:A, 5rx4:A, 5rx5:A, 5rx6:A, 5rx7:A, 5rx8:A, 5rx9:A, 5rxa:A, 5rxb:A, 5rxc:A, 5rxd:A, 5rxe:A, 5rxf:A, 5rxg:A, 5rxh:A, 5rxi:A, 5rxj:A, 5rxk:A, 5rxl:A, 5rxo:A, 5rxp:A, 5rxq:A, 5rxr:A, 5rxs:A, 5rxt:A, 5rxu:A, 5rxv:A, 5rxw:A, 5rxy:A, 5rxz:A, 5ry0:A, 5ry1:A, 5ry2:A, 5ry3:A, 5ry4:A, 5ry5:A, 5ry6:A, 5ry7:A, 5ry8:A, 5ry9:A, 5rya:A, 5ryb:A, 5ryc:A, 5ryd:A, 5rye:A, 5ryg:A, 5ryh:A, 5ryi:A, 5ryj:A, 5ryk:A, 5ryl:A, 6xy7:AAA
5 7oyd:v 726 17 0.3429 0.0165 0.7059 6.7
6 6pgv:A 152 33 0.3714 0.0855 0.3939 8.8
7 8y0w:CB 768 17 0.3429 0.0156 0.7059 9.7 8y0x:CB

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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