Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
SALTKRTHRVKVQVLKDFPRFQLYKGQVANVKPSLMRNYLHNFNGAKYILSEEHDINTELLKQYQTLEAKLEED

The query sequence (length=74) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5mrc:G 74 74 1.0000 1.0000 1.0000 4.63e-51 3j6b:G, 5mre:G, 5mrf:G
2 6z1p:Al 53 45 0.2162 0.3019 0.3556 0.040
3 6lvb:A 762 29 0.1622 0.0157 0.4138 0.51 6lvb:C, 6lvb:E, 6lvb:G, 6lvc:A, 6lvc:C, 6lvv:A, 6lvv:C, 6lvv:E, 6lvv:G, 6lvv:I, 6lvv:K, 6lvv:M, 6lvv:O, 7w8j:A, 7w8j:C, 7w8j:E, 7w8j:G
4 5zal:A 1314 38 0.1757 0.0099 0.3421 1.9 2eb1:A, 2eb1:B, 2eb1:C, 4ngd:A, 5zam:A
5 8roy:A 331 66 0.2973 0.0665 0.3333 2.2
6 5j8b:z 671 15 0.1351 0.0149 0.6667 2.5 5imq:B
7 4v4i:G 148 15 0.1351 0.0676 0.6667 2.5 7azo:L9B, 7azo:L9A, 7azs:L9B, 7azs:L9A, 9b00:1I, 9b00:2I, 6b4v:J, 6b4v:NB, 6boh:J, 6boh:OB, 6bok:J, 6bok:MB, 6buw:YI, 6buw:RI, 6bz6:YI, 6bz6:RI, 6bz7:YI, 6bz7:RI, 6bz8:YI, 6bz8:RI, 6c5l:DI, 6c5l:BI, 6cae:1I, 6cae:2I, 6cfj:1I, 6cfj:2I, 6cfk:1I, 6cfk:2I, 6cfl:1I, 6cfl:2I, 8cvj:1I, 8cvj:2I, 8cvk:1I, 8cvk:2I, 8cvl:1I, 8cvl:2I, 5czp:YI, 5czp:RI, 6czr:1I, 6czr:2I, 5d8b:BB, 5d8b:F, 5dfe:YI, 5dfe:RI, 5dox:1I, 5dox:2I, 5doy:1I, 5doy:2I, 5e7k:69, 5e7k:61, 5e81:69, 5e81:61, 8ekb:1I, 8ekb:2I, 5el4:69, 5el4:61, 5el5:69, 5el5:61, 5el6:69, 5el6:61, 5el7:69, 5el7:61, 8ev6:1I, 8ev6:2I, 8ev7:1I, 8ev7:2I, 5f8k:1I, 5f8k:2I, 8fc1:1I, 8fc1:2I, 8fc2:1I, 8fc2:2I, 8fc3:1I, 8fc3:2I, 8fc4:1I, 8fc4:2I, 8fc5:1I, 8fc5:2I, 8fc6:1I, 8fc6:2I, 5fdu:1I, 5fdu:2I, 5fdv:1I, 5fdv:2I, 6fkr:1I, 6fkr:2I, 8fom:YI, 8fom:RI, 8fon:YI, 8fon:RI, 8g29:1I, 8g29:2I, 8g2a:1I, 8g2a:2I, 8g2b:1I, 8g2b:2I, 8g2c:1I, 8g2c:2I, 8g2d:1I, 8g2d:2I, 6gsj:69, 6gsj:61, 6gsk:69, 6gsk:61, 6gsl:69, 6gsl:61, 5hcp:1I, 5hcp:2I, 5hcq:1I, 5hcq:2I, 5hcr:1I, 5hcr:2I, 5hd1:1I, 5hd1:2I, 5ib7:69, 5ib7:61, 5ib8:69, 5ib8:61, 5ibb:69, 5ibb:61, 5j30:RI, 5j30:YI, 5j3c:RI, 5j3c:YI, 5j4b:1I, 5j4b:2I, 5j4c:1I, 5j4c:2I, 5j4d:J, 5j4d:OB, 7jql:1I, 7jql:2I, 7jqm:1I, 7jqm:2I, 4l47:YI, 4l47:RI, 4l71:YI, 4l71:RI, 4lel:YI, 4lel:RI, 4lfz:YI, 4lfz:RI, 7lh5:DI, 7lh5:BI, 4lnt:YI, 4lnt:RI, 4lsk:YI, 4lsk:RI, 4lt8:YI, 4lt8:RI, 7md7:1I, 7md7:2I, 6n1d:BL09, 6n1d:AL09, 6n9e:1I, 6n9e:2I, 6n9f:1I, 6n9f:2I, 5ndj:69, 5ndj:61, 5ndk:69, 5ndk:61, 6nd5:1I, 6nd5:2I, 6nd6:1I, 6nd6:2I, 6ndk:YI, 6ndk:RI, 6nsh:RI, 6nsh:YI, 6nta:YI, 6nta:RI, 6nuo:YI, 6nuo:RI, 6nwy:YI, 6nwy:RI, 6o3m:YI, 6o3m:RI, 6o97:1I, 6o97:2I, 6of1:1I, 6of1:2I, 6of6:YI, 6of6:RI, 6oj2:YI, 6oj2:RI, 6ope:YI, 6ope:RI, 6ord:YI, 6ord:RI, 6osi:YI, 6osi:RI, 5ot7:7, 6otr:YI, 6otr:RI, 6oxa:YI, 6oxa:RI, 6oxi:YI, 6oxi:RI, 4p6f:YI, 4p6f:RI, 4p70:YI, 4p70:RI, 6qnq:69, 6qnq:61, 6qnr:69, 6qnr:61, 7rq8:1I, 7rq8:2I, 7rq9:1I, 7rq9:2I, 7rqa:1I, 7rqa:2I, 7rqb:1I, 7rqb:2I, 7rqc:1I, 7rqc:2I, 7rqd:1I, 7rqd:2I, 7rqe:1I, 7rqe:2I, 8t8b:1I, 8t8b:2I, 8t8c:1I, 8t8c:2I, 4tua:YI, 4tua:RI, 4tub:YI, 4tub:RI, 4tuc:YI, 4tuc:RI, 4tud:YI, 4tud:RI, 4tue:YI, 4tue:RI, 7u2h:1I, 7u2h:2I, 7u2i:1I, 7u2i:2I, 7u2j:1I, 7u2j:2I, 8ud6:1I, 8ud6:2I, 8ud7:1I, 8ud7:2I, 8ud8:1I, 8ud8:2I, 6uo1:1I, 6uo1:2I, 5uq7:I, 5uq8:I, 8uvr:1I, 8uvr:2I, 8uvs:1I, 8uvs:2I, 4v4j:G, 4v4x:BK, 4v4y:BK, 4v4z:BK, 4v51:DI, 4v51:BI, 4v5a:BI, 4v5a:DI, 4v5c:BI, 4v5c:DI, 4v5d:BI, 4v5d:DI, 4v5e:DI, 4v5e:BI, 4v5j:DI, 4v5j:BI, 4v5k:DI, 4v5k:BI, 4v63:DI, 4v63:BI, 4v67:DI, 4v67:BI, 4v68:BI, 4v6a:BI, 4v6a:DI, 4v6f:AK, 4v6f:DK, 4v6g:BK, 4v6g:DK, 4v7j:AI, 4v7j:BI, 4v7k:AI, 4v7k:BI, 4v7l:BI, 4v7l:DI, 4v7m:BI, 4v7m:DI, 4v7p:BH, 4v7p:CH, 4v7w:BI, 4v7w:DI, 4v7x:BI, 4v7x:DI, 4v7y:BI, 4v7y:DI, 4v7z:BI, 4v7z:DI, 4v83:BH, 4v83:DH, 4v84:BH, 4v84:DH, 4v87:AK, 4v87:DK, 4v8a:AI, 4v8a:BI, 4v8b:DK, 4v8b:BK, 4v8c:AK, 4v8c:BK, 4v8d:DK, 4v8d:BK, 4v8e:AK, 4v8e:CK, 4v8f:AK, 4v8f:DK, 4v8g:BI, 4v8g:DI, 4v8h:BI, 4v8h:DI, 4v8i:BI, 4v8i:DI, 4v8j:DI, 4v8j:BI, 4v8n:BI, 4v8n:DI, 4v8x:DI, 4v8x:BI, 5v8i:1I, 5v8i:2I, 4v95:BI, 4v95:DI, 4v97:DI, 4v97:BI, 4v9a:DK, 4v9a:BK, 4v9b:DK, 4v9b:BK, 4v9i:BI, 4v9i:DI, 4v9n:DI, 4v9n:BI, 4v9q:AI, 4v9q:CI, 4v9r:BI, 4v9r:DI, 4v9s:BI, 4v9s:DI, 5vp2:1I, 5vp2:2I, 5vpo:YI, 5vpo:RI, 5vpp:RI, 5vpp:YI, 8vtu:1I, 8vtu:2I, 8vtv:1I, 8vtv:2I, 8vtw:1I, 8vtw:2I, 8vtx:1I, 8vtx:2I, 8vty:1I, 8vty:2I, 1vvj:YI, 1vvj:RI, 1vy4:BI, 1vy4:DI, 1vy5:BI, 1vy5:DI, 1vy6:BI, 1vy6:DI, 1vy7:BI, 1vy7:DI, 4w2f:BI, 4w2f:DI, 4w2g:BI, 4w2g:DI, 4w2h:BI, 4w2h:DI, 4w2i:BI, 4w2i:DI, 4w4g:YI, 4w4g:RI, 5w4k:1I, 5w4k:2I, 5wis:1I, 5wis:2I, 5wit:1I, 5wit:2I, 4wq1:69, 4wq1:61, 4wqr:69, 4wqr:61, 4wr6:69, 4wr6:61, 4wra:69, 4wra:61, 4wro:61, 4wsd:69, 4wsd:61, 4wsm:69, 4wsm:61, 4wt1:69, 4wt1:61, 4wt8:DI, 4wt8:CI, 4wu1:69, 4wu1:61, 4wzd:69, 4wzd:61, 4wzo:69, 4wzo:61, 4xej:BL09, 4xej:AL09, 6xhv:1I, 6xhv:2I, 6xhw:1I, 6xhw:2I, 6xhx:1I, 6xhx:2I, 6xhy:1I, 6xhy:2I, 6xqd:1I, 6xqd:2I, 6xqe:1I, 6xqe:2I, 4y4o:1I, 4y4o:2I, 4y4p:1I, 4y4p:2I, 4ypb:YI, 4ypb:RI, 4yzv:YI, 4yzv:RI, 4z3s:1I, 4z3s:2I, 4z8c:1I, 4z8c:2I, 4zer:1I, 4zer:2I, 4zsn:YI, 4zsn:RI
8 4w2e:y 644 15 0.1351 0.0155 0.6667 2.6
9 2hun:A 329 40 0.1622 0.0365 0.3000 3.0 2hun:B
10 5hau:1z 730 15 0.1351 0.0137 0.6667 4.6 2bm0:A, 2bm1:A, 1fnm:A, 6gzq:H1, 6gzx:H1, 6gzx:H2, 6gzz:H1, 6gzz:H2, 5hau:2z, 4m1k:A, 4myt:A, 4myu:A, 2om7:L, 5ot7:U, 6q95:G, 6ucq:1v, 6ucq:2v, 4v5f:AY, 4v5f:CY, 4v5m:AY, 4v5n:AY, 4v6t:AY, 4v8u:AY, 4v8u:CY, 4v90:AY, 4v9j:AY, 4v9j:CY, 4v9k:AY, 4v9k:CY, 4v9l:AY, 4v9l:CY, 4v9m:AY, 4v9m:CY, 4w29:AY, 4w29:CY, 4wpo:BZ, 4wpo:DZ, 4wqf:BZ, 4wqf:DZ, 4wqu:BZ, 4wqu:DZ, 4wqy:BZ, 4wqy:DZ
11 2d1r:A 539 34 0.1486 0.0204 0.3235 6.0 2d1q:A, 2d1s:A, 2d1t:A
12 8u5a:A 149 26 0.1622 0.0805 0.4615 8.3 8u5a:B
13 8xme:A 1176 50 0.2162 0.0136 0.3200 8.5 7eu0:A, 8xmb:A, 8xmc:A, 8xmd:A
14 5dgk:A 519 46 0.1892 0.0270 0.3043 9.9 5dgk:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218