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BioLiP
>protein
SALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNRYDVLVNVAITPERQKKYD
FSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLSRFAKELKSHLVFSHNFEQSLQLLLSKRTDATMIPDIPFF
NFLERRPHDGNLFKIADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDKNIISSVPGCSS

The query sequence (length=234) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8gtu:A 236 234 1.0000 0.9915 1.0000 2.35e-175 6a80:A, 6a80:B, 6a8s:A, 6a8s:B, 6aal:A, 8gtu:B, 8gu1:A, 8gu1:B
2 5t0w:A 229 225 0.3632 0.3712 0.3778 3.89e-39 5t0w:B, 5t0w:C, 5t0w:D
3 2yln:A 240 225 0.3162 0.3083 0.3289 7.99e-39
4 4zv1:A 226 226 0.3333 0.3451 0.3451 4.73e-38 4zv2:A
5 4ymx:A 224 221 0.2991 0.3125 0.3167 1.22e-24 4ymx:B
6 3k4u:E 234 225 0.2821 0.2821 0.2933 3.41e-23 3k4u:A, 3k4u:B, 3k4u:C, 3k4u:D, 3k4u:F
7 3vvd:A 241 227 0.2778 0.2697 0.2863 2.93e-22 3vv5:A, 3vv5:B, 3vvd:B, 3vve:A, 3vve:B, 3vvf:A, 3vvf:B
8 4g4p:A 235 223 0.2650 0.2638 0.2780 3.35e-22
9 1hsl:A 238 230 0.2821 0.2773 0.2870 1.49e-21 1hsl:B
10 8vi8:A 227 223 0.2906 0.2996 0.3049 6.37e-21 8eyz:A, 8eyz:B, 8eyz:C, 8eyz:D, 8eyz:E, 8eyz:F, 8eyz:G, 8eyz:H, 8eyz:I, 8eyz:J, 8eyz:L, 8eyz:K, 8hnj:A, 8hnj:B, 8hnj:C, 8hnj:D, 8hnj:E, 8hnj:F, 8vi8:B, 8vi8:C, 8vi8:D, 8vi8:E, 8vi8:F, 1wdn:A
11 4h5f:A 240 224 0.2521 0.2458 0.2634 1.66e-20 4h5f:B, 4h5f:C, 4h5f:D, 4h5g:A, 4h5g:B
12 6svf:A 229 226 0.2863 0.2926 0.2965 6.75e-20 6ggv:A, 6ggv:B, 4psh:A, 4psh:B, 6q3u:A
13 2pyy:B 217 200 0.2308 0.2488 0.2700 5.58e-19 2pyy:A, 2pyy:C
14 4zef:A 239 224 0.2692 0.2636 0.2812 1.81e-18
15 5kkw:A 237 229 0.2521 0.2489 0.2576 2.00e-18
16 5ovz:A 259 249 0.2692 0.2432 0.2530 2.67e-18 5ito:A, 5ito:B, 5itp:A, 5itp:B, 5ot8:A, 5ot8:B, 5ot9:A, 5ot9:B, 5ota:A, 5ota:B, 5otc:A, 5otc:B, 5ovz:B, 4pow:A, 4pow:B, 4pp0:A, 4pp0:B
17 1laf:E 238 232 0.2479 0.2437 0.2500 1.71e-16 6ft2:A, 1lag:E, 1lah:E, 1lst:A, 6mku:E, 6mkw:A, 6ml9:E, 6mla:E, 6mle:E, 6mlg:E, 6mli:E, 6mlj:A, 6mlj:B, 6mln:E, 6mlo:E, 6mlp:E, 5owf:A
18 5eyf:B 243 207 0.2350 0.2263 0.2657 1.27e-15 5eyf:A
19 5lom:B 250 228 0.2735 0.2560 0.2807 1.29e-14 6hqh:A, 5l9o:A, 5l9o:B, 5lom:A
20 6fxg:B 226 224 0.2137 0.2212 0.2232 3.02e-14 8b5d:A, 8b5d:B, 8b5e:A, 8b5e:B, 6fxg:A, 6fxg:C
21 4i62:A 237 214 0.2521 0.2489 0.2757 5.93e-14
22 4gvo:A 236 231 0.2735 0.2712 0.2771 1.38e-13 4gvo:B
23 4kqp:A 230 227 0.2308 0.2348 0.2379 1.78e-13
24 2q2a:A 241 224 0.2521 0.2448 0.2634 5.27e-13 2pvu:A, 2q2a:B, 2q2a:C, 2q2a:D, 2q2c:A, 2q2c:B, 2q2c:C, 2q2c:D
25 1xt8:B 251 228 0.2607 0.2430 0.2675 6.03e-13 1xt8:A
26 4eq9:A 240 231 0.2436 0.2375 0.2468 1.06e-12
27 3i6v:A 218 230 0.2265 0.2431 0.2304 1.07e-12
28 3qax:B 235 93 0.1667 0.1660 0.4194 2.26e-12 3n26:A, 3qax:A
29 4ohn:A 246 242 0.2607 0.2480 0.2521 3.88e-12
30 7a99:B 130 84 0.1453 0.2615 0.4048 4.74e-12 7a99:A, 6gpc:A, 6gpc:B
31 4c0r:A 239 231 0.2393 0.2343 0.2424 6.36e-12 4c0r:B
32 3tql:A 225 227 0.2350 0.2444 0.2423 8.26e-12
33 2y7i:A 228 231 0.2179 0.2237 0.2208 2.89e-11 2y7i:B
34 6h2t:A 288 206 0.2436 0.1979 0.2767 3.25e-11 6h1u:A, 6h20:A
35 2yjp:A 247 227 0.2692 0.2551 0.2775 3.29e-11 2yjp:B, 2yjp:C
36 6det:A 243 230 0.2179 0.2099 0.2217 7.05e-11
37 5org:A 257 99 0.1239 0.1128 0.2929 2.21e-10 5org:B
38 8hqr:A 267 93 0.1239 0.1086 0.3118 4.86e-10 8hqr:B
39 8pnh:A 386 85 0.1368 0.0829 0.3765 5.39e-09
40 8pnj:A 390 84 0.1197 0.0718 0.3333 3.95e-07
41 8bn5:B 267 105 0.1410 0.1236 0.3143 1.97e-06 8blj:A, 8blj:B, 8blj:C, 8blj:D, 8blj:E, 8blj:F, 8bn2:A, 8bn2:B, 8bn5:A
42 4f3s:A 231 174 0.1709 0.1732 0.2299 2.13e-06 4dz1:A
43 8ovo:A 503 231 0.2265 0.1054 0.2294 2.33e-06 8ovo:B, 8ovp:A, 8ovp:B, 2vha:A, 2vha:B
44 2v25:A 231 151 0.1880 0.1905 0.2914 2.84e-05 2v25:B
45 2ia4:B 278 229 0.2308 0.1942 0.2358 7.58e-05 2ia4:A
46 5ikb:A 249 108 0.1325 0.1245 0.2870 1.68e-04
47 5cc2:A 256 98 0.1068 0.0977 0.2551 0.017 2v3t:A, 2v3t:B, 2v3u:A
48 5dtb:A 263 106 0.1197 0.1065 0.2642 0.029 5dtb:B, 5ehm:A, 5ehm:B, 5ehs:A, 5ehs:B
49 6jmv:A 256 104 0.1282 0.1172 0.2885 0.098 8bst:A, 8bst:B, 8bst:C, 8bst:D, 8bsu:A, 8bsu:D, 8bsu:B, 8bsu:C, 8bsu:E, 8bsu:H, 8bsu:F, 8bsu:G, 4e0w:A, 6f28:A, 6f28:B, 6f29:A, 4g8n:A, 4igr:A, 6jmv:B, 4mh5:A, 5nf6:B, 5nf6:A, 4nwc:A, 4nwd:A, 5o4f:B, 5o4f:A, 3s9e:A, 3s9e:B, 3u92:A, 3u92:B, 3u93:A, 3u93:B, 3u94:A, 3u94:B, 3u94:C, 3u94:D
50 3oen:A 250 164 0.1410 0.1320 0.2012 0.10
51 3oek:A 270 177 0.1709 0.1481 0.2260 0.11 4jwy:A, 3oel:A, 3oem:A
52 7yff:B 740 84 0.0897 0.0284 0.2500 0.11 7yff:D
53 7yfr:B 643 83 0.0897 0.0327 0.2530 0.17 7yfr:D
54 8e96:D 691 83 0.0897 0.0304 0.2530 0.17 8e96:B
55 7yfl:B 679 80 0.0812 0.0280 0.2375 0.31 7yfl:D
56 4tll:D 757 91 0.0983 0.0304 0.2527 0.33 4tll:B, 4tlm:B, 5un1:B
57 3hmq:A 262 57 0.0726 0.0649 0.2982 0.48
58 6r88:D 243 183 0.1752 0.1687 0.2240 0.56 6r85:A, 6r85:B, 6r88:A, 6r88:B, 6r88:C, 6r89:A, 6r89:B, 6r89:C, 6r89:D, 6r8a:A, 6r8a:C, 6r8a:D
59 7xjn:A 322 86 0.0983 0.0714 0.2674 0.60 7xjn:B, 7xjn:C, 7xjn:D
60 6vu9:A 631 50 0.0726 0.0269 0.3400 0.61
61 5iov:B 798 84 0.0940 0.0276 0.2619 0.61 5iou:B, 5iou:D, 5iov:D, 5un1:D, 5un1:H
62 4tlm:D 753 84 0.0940 0.0292 0.2619 0.64
63 4z9n:B 324 150 0.1538 0.1111 0.2400 0.88 4z9n:A, 4z9n:C, 4z9n:D, 4z9n:E, 4z9n:F
64 7yfg:B 652 217 0.2009 0.0721 0.2166 1.2 8e94:B, 7yfg:D, 7yfh:B, 7yfh:D
65 6njm:A 784 99 0.1026 0.0306 0.2424 2.1 6njm:C, 6njn:C
66 5dt6:A 266 106 0.1026 0.0902 0.2264 2.8 5ict:A
67 1wxi:A 261 57 0.0726 0.0651 0.2982 3.0 1wxe:A, 1wxg:A, 1wxh:A
68 7vyx:A 1211 119 0.1282 0.0248 0.2521 3.1 7vyx:B
69 4wxj:B 254 129 0.1325 0.1220 0.2403 3.6 4wxj:A
70 9are:B 789 84 0.0855 0.0253 0.2381 5.9 9are:D, 9arf:B, 9arf:D, 9ari:B, 9ari:D, 9bib:B, 9bib:D, 6e7r:B, 6e7r:D, 6e7s:B, 6e7s:D, 6e7t:B, 6e7t:D, 6e7u:B, 6e7u:D, 6e7v:B, 6e7v:D, 6e7w:B, 6e7w:D, 6e7x:B, 6e7x:D, 5ewj:B, 5ewj:D, 5ewl:B, 5ewl:D, 5ewm:B, 5ewm:D, 8g18:B, 8g18:D, 3jpy:A, 3qel:B, 3qel:D, 3qem:B, 3qem:D, 7saa:B, 7saa:D, 7sac:B, 7sac:D, 6whu:B, 6whu:D, 6whv:B, 6whv:D, 6whw:B, 6whw:D, 6whx:B, 6whx:D
71 8u5y:B 700 57 0.0641 0.0214 0.2632 7.4 8u5y:A, 8u5y:C, 8u61:B, 8u61:A, 8u61:C
72 5f23:A 263 80 0.0855 0.0760 0.2500 8.7
73 4pe5:D 727 80 0.0769 0.0248 0.2250 9.1 4pe5:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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