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BioLiP
>protein
SAIERITKAAHLIDMNDIIREGNPTLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPVMAEKMGLRGGVGLAAPQLDIS
KRIIAVLVPNIAYDLEAIMYNPKIVSHSVQDAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIV
VQHEIDHINGIMFYDRINEKDPFAVKDGLLILE

The query sequence (length=193) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6ow7:P 196 196 0.9948 0.9796 0.9796 2.49e-139 2ai7:A, 2aia:A, 2aie:P, 4eox:P, 1lm6:A, 6ow2:P, 6ow7:Q, 3str:P, 3svj:P, 3sw8:P
2 5jex:A 203 203 0.8549 0.8128 0.8128 1.72e-122 5jez:A, 5jf0:A, 5jf1:A, 5jf2:A, 5jf3:A, 5jf4:A, 5jf5:A, 5jf6:A, 5jf7:A, 5jf8:A
3 2os3:A 205 203 0.7617 0.7171 0.7241 1.22e-108
4 3l87:A 200 199 0.7513 0.7250 0.7286 8.72e-108
5 3cmd:B 188 182 0.6684 0.6862 0.7088 1.61e-96 3cmd:A, 3g6n:A, 3g6n:B
6 2os1:A 179 182 0.6580 0.7095 0.6978 7.93e-93
7 1lqy:A 184 178 0.5285 0.5543 0.5730 1.21e-67
8 2okl:A 185 184 0.5026 0.5243 0.5272 2.35e-65 2okl:B
9 1lm4:A 190 180 0.4974 0.5053 0.5333 1.21e-59 6jfg:A, 6jfo:A, 6jfq:A, 6jfr:A, 6jfs:A, 1lm4:B, 1lmh:A, 1lqw:A, 1lqw:B, 1q1y:A, 3u7k:A, 3u7l:A, 3u7m:A, 3u7n:A
10 3uwb:A 149 159 0.3109 0.4027 0.3774 1.12e-21 3uwa:A
11 1y6h:A 177 178 0.3161 0.3446 0.3427 2.35e-21 1sv2:A, 1sv2:B, 1szz:A, 1szz:B, 1szz:C, 1szz:D, 1szz:E, 1szz:F, 1szz:G, 1szz:H, 1vev:A, 1vev:B, 1vey:A, 1vey:B, 1vez:A, 1vez:B, 1y6h:B
12 1jym:A 179 177 0.3212 0.3464 0.3503 9.38e-21 1jym:B, 1jym:C, 1jym:D, 1jym:E, 1jym:F, 1jym:G, 1jym:H, 1jym:I, 1jym:J, 1rl4:A, 1rl4:B, 1rqc:A, 1rqc:B, 1rqc:C, 1rqc:D, 1rqc:E, 1rqc:F, 1rqc:G, 1rqc:H, 1rqc:I, 1rqc:J
13 6jes:A 159 125 0.2850 0.3459 0.4400 5.53e-20 6jes:B, 6jf3:A, 6jf3:B, 6jf4:B, 6jf4:A, 6jf5:B, 6jf5:A, 6jf6:C, 6jf6:A, 6jf6:B, 6jf6:D, 6jf7:A, 6jf7:B, 6jf8:A, 6jf8:B, 6jf8:C, 6jf8:D
14 4wxl:C 165 134 0.2539 0.2970 0.3657 3.90e-19 4wxl:A, 4wxl:B, 4wxl:D
15 3oca:A 179 141 0.2902 0.3128 0.3972 7.98e-18 3oca:B, 3u04:A
16 3fwx:A 165 122 0.2332 0.2727 0.3689 2.99e-16 3fwx:B
17 3qu1:A 168 165 0.2746 0.3155 0.3212 4.64e-16 3qu1:B
18 5mtc:A 137 157 0.2539 0.3577 0.3121 1.47e-14 5mtc:B, 5mtd:A, 5mtd:B, 5mte:A, 5mte:B
19 1bs4:A 168 119 0.2124 0.2440 0.3445 1.72e-14 2ai8:A, 2ai8:B, 2ai8:C, 4al2:B, 4al3:A, 4az4:A, 1bs4:B, 1bs4:C, 1bs5:A, 1bs5:B, 1bs5:C, 1bs6:A, 1bs6:B, 1bs6:C, 1bs8:A, 1bs8:B, 1bs8:C, 1bsj:A, 1bsk:A, 1bsz:A, 1bsz:B, 1bsz:C, 7d6z:g, 1def:A, 2def:A, 1dff:A, 1g27:A, 1g27:B, 1g27:C, 1g2a:A, 1g2a:B, 1g2a:C, 3k6l:A, 3k6l:B, 2kmn:A, 1lru:A, 1lru:B, 1lru:C, 8ofe:A, 8rhr:A, 2w3t:A, 2w3u:A, 1xem:A, 1xen:A, 1xeo:A
20 6jfc:B 161 178 0.2746 0.3292 0.2978 4.08e-14 6jfa:A, 6jfc:A, 6jfd:C, 6jfe:B, 6jff:B, 6jfn:B
21 4dr8:A 188 132 0.2383 0.2447 0.3485 1.29e-13 4dr8:B, 4dr8:C, 4dr8:D, 4dr9:A, 4dr9:B, 4dr9:C, 4dr9:D
22 5j46:A 169 137 0.2435 0.2781 0.3431 1.59e-13
23 3cpm:A 184 138 0.2332 0.2446 0.3261 5.85e-13 3m6o:A, 3m6o:B, 3m6p:A, 3m6p:B, 3m6q:A, 3m6r:A, 3m6r:B, 3m6r:C, 3m6r:D, 3o3j:A, 3pn2:A, 3pn3:A, 3pn3:B, 3pn4:A, 3pn5:A, 3pn6:A, 3pn6:B
24 6ck7:A 172 114 0.2280 0.2558 0.3860 9.17e-13 6ck7:B, 6ck7:C, 6ck7:D
25 2ew5:A 166 169 0.2435 0.2831 0.2781 8.90e-12 4e9a:A, 4e9b:A, 2ew6:A, 2ew7:A
26 4je6:A 193 180 0.2694 0.2694 0.2889 2.53e-11 4je6:B, 4je7:A, 4je7:B, 4je8:A, 4je8:B, 1zxz:A, 1zxz:B, 1zy0:A, 1zy0:B, 1zy1:A, 1zy1:B
27 6jex:A 172 121 0.2021 0.2267 0.3223 3.45e-11 6jer:A, 6jer:B, 6jet:A, 6jet:B, 6jeu:A, 6jeu:B, 6jev:A, 6jev:B, 6jew:A, 6jew:B, 6jex:B
28 3g5k:A 183 185 0.2487 0.2623 0.2595 6.48e-11 3g5k:B, 3g5k:C, 3g5k:D, 3g5p:A, 3g5p:B, 3g5p:C, 3g5p:D
29 1ix1:A 169 167 0.2435 0.2781 0.2814 9.02e-11 1ix1:B, 1lry:A, 1n5n:A, 1n5n:B, 1s17:A, 1s17:B
30 5cy7:A 171 186 0.2902 0.3275 0.3011 9.90e-11 5cp0:A, 5cpd:A, 5cvk:A, 5cvp:A, 5cvq:A, 5cwx:A, 5cwy:A, 5cx0:A, 5cxj:A, 5cy8:A, 6ikt:A, 6iky:A, 6il0:A, 6il2:A, 4nt8:A
31 5kob:A 171 137 0.2332 0.2632 0.3285 1.33e-10 5kob:B, 5kob:C, 5kob:D, 5vcp:A, 5vcp:B, 5vcp:C, 5vcp:D
32 1ws1:A 151 162 0.2539 0.3245 0.3025 2.42e-10
33 5hgw:A 174 184 0.2902 0.3218 0.3043 5.18e-08 5hgw:B, 5i2b:A, 5t8z:A
34 3e3u:A 196 170 0.2435 0.2398 0.2765 1.31e-07
35 4pyt:A 302 71 0.1088 0.0695 0.2958 0.98
36 3qdk:A 546 118 0.1710 0.0604 0.2797 1.00
37 6cbo:C 411 60 0.1036 0.0487 0.3333 2.4 6cbo:A, 6cbo:B, 6cbo:D, 5z83:A, 5z83:B, 5z8a:A, 5z8a:B, 5z8k:A, 5z8k:B
38 6eyv:A 459 34 0.0674 0.0283 0.3824 5.0 6eyv:B, 6rrp:A, 6rrq:A, 6rrq:B
39 8bmw:H 275 29 0.0777 0.0545 0.5172 5.4 8bmw:I

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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