BioLiP

>protein
SAFDLGFIRGMTFGFVGQHGTWGTDEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHA
LGLKVCLKPTVNCRDGTWRGEIRFEKEHGPDLESWEAWFGSYSDMMAHYAHVAKRTGCEMFCVGCEMTTAEPHEAMWRET
IARVRTEYDGLVTYNCNHGREEHVRFWDAVDLISSSAYYPIDRWRDRVPVLREVAEAHEKPLFFMEVGCPSRSGSGACPW
DYRHPGAVCLDEQARFYEAMFAAMPDEPWFKGYMLWEWPWKLYPREAASEDGSYCIYGKPAEDVVARAFSAIANR

The query sequence (length=315) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4cd6:A	315	315	1.0000	1.0000	1.0000	0.0	4cd7:A, 4cd7:B, 4cd8:A
2	7dwa:B	327	318	0.4508	0.4343	0.4465	4.53e-101	7dvj:B, 7dvj:A, 7dw8:A, 7dw8:B, 7dwa:A
3	5yli:B	309	308	0.4190	0.4272	0.4286	4.58e-93	5yli:A, 5ylk:B, 5ylk:A, 5yll:B, 5yll:A, 5z4t:B, 5z4t:A
4	1vh3:B	246	158	0.1079	0.1382	0.2152	0.81	1vh3:A
5	5l5a:Y	211	55	0.0508	0.0758	0.2909	2.0	5l5a:K, 5l5b:Y, 5l5b:K, 5l5d:Y, 5l5d:K, 5l5e:Y, 5l5e:K, 5l5f:Y, 5l5f:K, 5l5h:Y, 5l5h:K, 5l5i:Y, 5l5i:K, 5l5j:Y, 5l5j:K, 5l5o:Y, 5l5o:K, 5l5p:Y, 5l5p:K, 5l5q:Y, 5l5q:K, 5l5r:Y, 5l5r:K, 5l5s:Y, 5l5s:K, 5l5t:Y, 5l5t:K, 5l5u:Y, 5l5u:K, 5l5v:Y, 5l5v:K, 5l65:Y, 5l65:K, 5l66:Y, 5l66:K, 5l67:Y, 5l67:K, 5l68:Y, 5l68:K, 5l69:Y, 5l69:K, 5l6a:Y, 5l6a:K, 5l6b:Y, 5l6b:K, 5l6c:Y, 5l6c:K, 5ltt:K, 5ltt:Y, 5m2b:Y, 5m2b:K
6	7awe:L	203	55	0.0571	0.0887	0.3273	3.4	6avo:C, 6avo:D, 7awe:Z, 7b12:L, 7b12:Z, 6e5b:K, 6e5b:Y, 3unf:K, 3unf:Y
7	6ip0:A	472	62	0.0635	0.0424	0.3226	4.4	6ip4:A
8	6r61:A	350	43	0.0444	0.0400	0.3256	5.2	6r6a:A
9	4lxf:B	546	44	0.0444	0.0256	0.3182	7.7
10	3qgv:A	435	30	0.0381	0.0276	0.4000	7.7
11	6hjs:A	236	99	0.0921	0.1229	0.2929	8.6	6hjs:B

[Back]