BioLiP

>protein
RYYSSKQPYVAPNDATASSYSKAPKGYGPIYTESMARHGSRGLSSYKYDALLMRMAETAARDGGFKSEAIKAEFVKNLSG
ITAANVENGYGMLTGQGAQQHYGIGERAYQRNRSLFDQAAADGGTIAYQSSGEARATESGENFEKGFNEASGGRLIGNVS
APTNPADSGNGKDFQKNPDTLYFHKVQNPDGTSKVPGTKAYDIANNYQNFVANDATIAGAEKTIGDNVDVKRASHDLLSQ
IFTEEFLAKLENGEYKWYNTTDGTKKGGKNCAPGADASKDPDACGEVSKKIKSEYDAAMDLYNLYIIAADMHNENTGDHT
FAFDQYFQGAYADDARMFAWALDAEDFYEKGPSYAGQNETYSIAQPLLDDFLNTIDARVNGGSTVATFRFAHAQTMMPFA
ALLGLPGSTQQAPASTTDVYTYGNNEWRGESVTPMAANVQWDVYARKGEDPATGQRYTPIVRMLYNENEVPFRSECTPVA
DGSTWYKLTELKSCLAADHKTLGQDARI

The query sequence (length=508) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	6rxd:A	509	508	0.9980	0.9961	0.9980	0.0	6rxd:B, 6rxe:A, 6rxe:B, 6rxf:A, 6rxf:B, 6rxg:A, 6rxg:B
2	7zgh:A	413	498	0.3130	0.3850	0.3193	1.77e-58	7zgh:B
3	4fdt:A	398	187	0.1004	0.1281	0.2727	1.05e-12	4fdt:B, 4fdu:A, 4fdu:B
4	4fdt:A	398	114	0.0551	0.0704	0.2456	0.060	4fdt:B, 4fdu:A, 4fdu:B
5	7r5y:E	414	151	0.0886	0.1087	0.2980	1.58e-11	7r5y:A, 7r5y:B, 7r5y:C, 7r5y:D, 7r5y:F
6	7r5y:E	414	156	0.0965	0.1184	0.3141	1.73e-09	7r5y:A, 7r5y:B, 7r5y:C, 7r5y:D, 7r5y:F
7	1sk8:A	435	143	0.0827	0.0966	0.2937	0.014	1sk9:A
8	3k4q:A	438	129	0.0709	0.0822	0.2791	0.045	3k4q:B
9	1nd6:B	343	39	0.0256	0.0379	0.3333	0.56	1cvi:A, 1cvi:B, 1cvi:C, 1cvi:D, 2hpa:A, 2hpa:B, 2hpa:D, 1nd5:A, 1nd5:B, 1nd5:C, 1nd5:D, 1nd6:A, 1nd6:C, 1nd6:D
10	7d2f:A	328	96	0.0551	0.0854	0.2917	4.0	7d2f:B

[Back]