BioLiP

>protein
RYGPLRIKELAVDEELEKEDGLIPRQKSKLCKHGDRGMCEYCSPLPPWDKEYHEKNKIKHISFHSYLKKLNENANKKENG
SSYISPLSEPDFRINKRCHNGHEPWPRGICSKCQPSAITLQQQEFRMVDHVEFQKSEIINEFIQAWRYTGMQRFGYMYGS
YSKYDNTPLGIKAVVEAIYEPPQHDEQDGLTMDVEQVKNEMLQIDRQAQEMGLSRIGLIFTDLSDAGAGDGSVFCKRHKD
SFFLSSLEVIMAARHQTRHPNVSKYSEQGFFSSKFVTCVISGNLEGEIDISSYQVSTEAEALVTADMISGSTFPSMAYIN
DTTDERYVPEIFYMKSNEYGITVKENAKPAFPVDYLLVTLTHGFPNTDTETNSKFVSSTGFPWSNRQAMGQSQDYQELKK
YLFNVASSGDFNLLHEKISNFHLLLYINSLQILSPDEWKLLIESAVKNEWEESLLKLVSSAGWQTLVMILQESG

The query sequence (length=474) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8dau:G	475	474	1.0000	0.9979	1.0000	0.0	8dar:G, 8das:G, 8dat:G, 8dav:G, 8daw:G, 6jwh:A, 6jwi:A, 6jwi:E, 6jwj:A, 6oa9:G
2	6chs:A	460	468	0.4958	0.5109	0.5021	3.56e-171	6cdd:A, 6cdd:B
3	7wwp:A	420	472	0.3397	0.3833	0.3411	4.30e-87	7wwq:A
4	7sa3:A	303	89	0.0633	0.0990	0.3371	0.35
5	3gdc:A	288	106	0.0527	0.0868	0.2358	0.91	3gdc:B, 3gdc:C
6	2pom:A	355	75	0.0485	0.0648	0.3067	0.99
7	6kpm:A	295	38	0.0295	0.0475	0.3684	1.2	6kpn:A, 6kpo:A
8	2atx:A	186	49	0.0338	0.0860	0.3265	1.5	2atx:B
9	8jng:A	147	29	0.0253	0.0816	0.4138	1.9
10	6en3:A	934	79	0.0464	0.0236	0.2785	2.2	8a49:C, 4nuy:A, 4nuz:A
11	4ii3:A	986	141	0.0717	0.0345	0.2411	3.3	9b5c:A, 9b5d:A, 9b5e:A, 9b5f:A, 9b5g:A, 9b5h:A, 9b5i:A, 9b5j:A, 9b5k:A, 9b5l:A, 9b5m:A, 9b5n:A, 9b5o:A, 9b5p:A, 9b5q:A, 9b5r:A, 9b5s:A, 9b5t:A, 9b5u:A, 9b5v:A, 9b5w:A, 9b5x:A, 4ii2:A, 4ii3:C, 6o82:A, 6o82:C, 6o83:A, 6o83:C, 5um6:A
12	6e93:A	112	74	0.0401	0.1696	0.2568	3.6	6e94:A
13	4v3p:ST	82	44	0.0253	0.1463	0.2727	5.4

[Back]