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BioLiP
>protein
RTIRYVRYESELQMPDIMRLITKDLSEPYSIYTYRYFIHNWPQLCFLAMVGEECVGAIVCKLDMHKKMFRRGYIAMLAVD
SKYRRNGIGTNLVKKAIYAMVEGDCDEVVLETEITNKSALKLYENLGFVRDKRLFRYYLNGVDALRLKLWLR

The query sequence (length=152) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7mx2:A 152 152 1.0000 1.0000 1.0000 4.25e-112 7rb3:A
2 7l1k:A 149 141 0.4671 0.4765 0.5035 9.22e-49
3 6ygb:A 159 147 0.5000 0.4780 0.5170 1.55e-47 6ygc:A, 6ygd:A
4 5c88:A 158 151 0.3026 0.2911 0.3046 6.68e-14 6ag4:A, 6ag5:A, 5c88:B, 4lx9:A, 4r3k:A, 4r3l:A, 2x7b:A
5 5nnp:B 179 151 0.3158 0.2682 0.3179 3.70e-13 5nnp:F
6 6c95:B 160 127 0.2763 0.2625 0.3307 1.76e-12 6ppl:C, 6pw9:C
7 6z00:A 156 94 0.2105 0.2051 0.3404 6.10e-11 6yzz:A, 6z00:B
8 4hnx:B 213 149 0.3026 0.2160 0.3087 8.81e-11 4hnw:B, 6o07:B, 4xnh:B, 4xpd:B, 4y49:B, 4y49:H, 4y49:N
9 3pp9:A 176 97 0.2171 0.1875 0.3402 1.95e-10 3pp9:B, 3pp9:C
10 2ob0:C 166 87 0.1974 0.1807 0.3448 5.25e-09 2ob0:A, 2ob0:B, 6ppl:A, 2psw:A, 2psw:B, 2psw:C, 3tfy:A, 3tfy:B, 3tfy:C, 6wf3:A, 6wf3:B, 6wf3:C, 6wf3:D, 6wf3:E, 6wf3:F, 6wf5:A, 6wf5:B, 6wfg:A, 6wfg:C, 6wfg:E, 6wfk:A, 6wfk:B, 6wfk:C, 6wfn:A, 6wfo:A, 6wfo:B, 6wfo:C, 4x5k:A
11 4pv6:G 154 139 0.2434 0.2403 0.2662 1.24e-07 4pv6:C, 4pv6:I, 4pv6:F, 4pv6:A, 4pv6:H, 4pv6:J, 4pv6:E
12 4kvm:E 153 125 0.2368 0.2353 0.2880 4.93e-06 4kvm:F, 4kvm:G, 4kvm:H, 4kvo:E, 4kvo:F, 4kvo:G, 4kvo:H, 4kvx:A, 4kvx:B
13 1wwz:A 157 85 0.1974 0.1911 0.3529 5.33e-05 1wwz:B
14 5hgz:A 211 70 0.1513 0.1090 0.3286 2.50e-04 5hh0:A, 5hh1:A, 5icv:A, 5icv:B, 5icw:A, 5icw:B, 5icw:C, 5icw:D
15 8a9n:A 150 114 0.1776 0.1800 0.2368 3.31e-04 8a9n:B, 8a9o:A, 8a9o:B
16 2i79:A 171 88 0.1579 0.1404 0.2727 3.90e-04 2i79:B, 2i79:C, 2i79:D, 2i79:E, 2i79:F
17 8g0l:A 158 116 0.1908 0.1835 0.2500 5.85e-04 7stx:A, 6vp9:A
18 5f47:B 152 95 0.1513 0.1513 0.2421 0.001 5f47:A, 5f48:A, 5f48:B, 5f49:A, 5f49:B, 5f49:C, 5f49:D, 5u08:A, 5u08:B, 5u08:C, 5u08:D
19 2cnm:A 151 121 0.2039 0.2053 0.2562 0.001 2cnm:B, 2cnm:C, 2cns:A, 2cns:B, 2cns:C, 2cnt:A, 2cnt:B, 2cnt:C, 2cnt:D
20 5k18:B 179 134 0.2237 0.1899 0.2537 0.001 5k04:B, 5k18:D
21 6th0:A 176 151 0.2697 0.2330 0.2715 0.006 6tgx:A, 6tgx:B, 6th0:B
22 2ge3:A 164 96 0.1645 0.1524 0.2604 0.008 2ge3:B, 2ge3:C
23 7wx5:A 288 59 0.1250 0.0660 0.3220 0.010 7wx6:A, 7wx7:A
24 4qvt:D 146 86 0.1447 0.1507 0.2558 0.011 2pdo:H, 2pdo:B, 4qvt:A, 4qvt:B, 4qvt:C, 4qvt:E, 4qvt:F, 4qvt:G, 4qvt:H
25 3ddd:A 281 98 0.1776 0.0961 0.2755 0.020
26 1i1d:D 161 57 0.1184 0.1118 0.3158 0.030 1i12:A, 1i12:B, 1i12:C, 1i12:D, 1i1d:A, 1i1d:B, 1i1d:C
27 2bei:A 156 55 0.1118 0.1090 0.3091 0.039 2q4v:A
28 1tiq:A 173 113 0.1711 0.1503 0.2301 0.11 1tiq:B
29 2q0y:A 153 65 0.1447 0.1438 0.3385 0.14
30 4evy:A 147 72 0.1053 0.1088 0.2222 0.14 4evy:B
31 6e1x:C 176 124 0.1645 0.1420 0.2016 0.15 5cnp:B, 5cnp:D, 5cnp:F, 6cx8:A, 6cx8:B, 6cx8:C, 6cx8:D, 6cx8:E, 6cx8:F, 6e1x:A, 6e1x:B, 6e1x:D, 4mhd:A, 4mhd:B, 4mhd:C, 4mi4:A, 4mi4:B, 4mi4:C, 4ncz:A, 4ncz:C, 4ncz:B, 4r57:A, 4r57:B, 4r57:C, 4r57:D, 4r57:E, 4r57:F, 4r57:G, 4r57:H, 4r57:I, 4r57:J, 4r57:K, 4r57:L, 4r87:A, 4r87:B, 4r87:C, 4r87:D, 4r87:E, 4r87:F, 4r87:G, 4r87:H, 4r87:I, 4r87:J, 4r87:K, 4r87:L, 5ug4:A, 5ug4:B, 5ug4:C, 4ygo:A, 4ygo:C, 4ygo:D, 4ygo:E
32 6ao7:A 153 83 0.1513 0.1503 0.2771 0.15
33 6zmp:A 190 113 0.1908 0.1526 0.2566 0.17 6zmp:B
34 3f8k:A 131 86 0.1842 0.2137 0.3256 0.21
35 1yvk:A 152 84 0.1513 0.1513 0.2738 0.24 1yvk:B, 1yvk:C, 1yvk:D
36 7ovv:B 196 58 0.1447 0.1122 0.3793 0.28 7ovv:A
37 6yj9:A 143 32 0.0789 0.0839 0.3750 0.34 8ad6:A, 8ad6:B, 6yj7:A, 6yj7:B, 6yj9:B, 6yja:A, 6yja:B
38 2c27:A 301 42 0.0921 0.0465 0.3333 0.65 1ozp:A, 1p0h:A
39 5hmn:B 159 121 0.2434 0.2327 0.3058 0.94 5hmn:A, 5hmn:C, 5hmn:E, 5hmn:F
40 5kf2:A 317 54 0.1184 0.0568 0.3333 1.2 5kf1:A, 5kf1:B, 5kf8:A, 5kf9:A, 5kga:A, 5kga:B, 5kgh:A, 5kgh:B, 5kgj:A, 5kgp:A, 5kgp:B
41 3mgd:B 154 62 0.1053 0.1039 0.2581 1.6 3mgd:A
42 7oju:A 214 101 0.1645 0.1168 0.2475 1.6
43 5us1:A 189 65 0.0987 0.0794 0.2308 1.7 7jzs:A, 5us1:B, 5us1:C, 5us1:D, 5us1:E, 5us1:F, 5us1:G, 5us1:H, 5us1:I, 5us1:K, 5us1:L, 6vou:A, 6vou:B, 6vr2:A, 6vr2:B, 6vr3:A, 6vr3:B, 6vta:A, 6vta:B
44 1s5k:A 153 56 0.0855 0.0850 0.2321 1.9 1s3z:A, 1s3z:B, 1s5k:B, 1s60:A, 2vbq:A, 2vbq:B
45 6vfn:A 167 125 0.1776 0.1617 0.2160 2.1 6vfn:F, 6vfn:B, 6vfn:C, 6vfn:D, 6vfn:E, 6vfn:H, 6vfn:I, 6vfn:J, 6vfn:G, 6vfn:L, 6vfn:K
46 7zkt:B 202 58 0.1382 0.1040 0.3621 3.2 7zhc:A, 7zhc:B, 7zkt:A, 7zkt:C, 7zkt:D, 7zkt:E, 7zkt:F, 7zkt:G, 7zkt:H
47 2isq:A 320 44 0.1118 0.0531 0.3864 3.3 1z7w:A, 1z7y:A
48 2yev:A 780 32 0.0789 0.0154 0.3750 3.5 2yev:D
49 4dcm:A 360 47 0.1053 0.0444 0.3404 4.8
50 6bvc:A 154 93 0.1711 0.1688 0.2796 5.7 1bo4:A, 1bo4:B
51 4rs2:B 183 29 0.0789 0.0656 0.4138 9.7 4rs2:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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