BioLiP

>protein
RSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTGDQFIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILC
LFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAL

The query sequence (length=124) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4fyh:A	127	125	0.9919	0.9685	0.9840	5.02e-86	4fyh:B, 4fyh:C, 4fyi:A, 4fyi:C, 4fyk:B, 4fyk:D, 4kxl:B, 4kxn:B, 4kxn:C
2	2klh:A	152	140	0.9839	0.8026	0.8714	5.11e-83	4fyh:D, 4fyi:B, 4fyi:D, 4fyk:A, 4fyk:C, 2klh:B, 4kxl:A, 4kxl:C, 4kxl:D, 4kxm:A, 4kxm:B, 4kxm:C, 4kxm:D, 4kxn:A, 4kxn:D, 4p5d:C, 4p5d:A
3	8osc:B	126	122	0.8387	0.8254	0.8525	6.42e-72	8osc:A
4	8qhq:A	143	137	0.8387	0.7273	0.7591	7.81e-70	4p5e:A, 4p5e:B, 8qhq:B, 8qhq:C, 8qhq:D, 8qhq:E, 8qhq:F, 8qhr:A, 8qhr:B
5	2f17:A	255	62	0.1532	0.0745	0.3065	0.54	2f17:B, 1ig3:A, 1ig3:B
6	8x1a:B	319	46	0.1452	0.0564	0.3913	0.59
7	3s4y:A	224	51	0.1290	0.0714	0.3137	0.66	3s4y:B
8	8v4a:A	466	38	0.1048	0.0279	0.3421	0.87	9bnj:A, 9bnj:B, 9bnj:C, 9bnj:D, 8v2k:A, 8v2k:B, 8v2k:C, 8v2k:D, 8v4a:B, 8v4a:C, 8v4a:D, 8v6p:A, 8v6p:B, 8v6p:C, 8v6p:D, 8v9p:A, 8v9p:B, 8v9p:C, 8v9p:D, 5w19:A, 5w19:B, 5w19:C, 5w19:D
9	1f8y:A	156	64	0.1371	0.1090	0.2656	1.4	1f8y:B
10	6ryd:A	69	43	0.1129	0.2029	0.3256	1.9	6ryd:B, 6ryd:E, 6ryd:F, 6ryi:A, 6ryi:B, 6ryi:C, 6ryi:D, 6ryi:E, 6ryl:A, 6ryl:B, 6ryl:C, 6ryl:D, 6ryl:E
11	8rh3:A	156	47	0.1532	0.1218	0.4043	3.2	8pqp:A, 8pqq:A, 8pqq:C, 8pqq:B, 8pqq:D, 8pqr:B, 8pqr:D, 8pqr:A, 8pqr:C, 8qc0:A, 8qc0:B, 8qc0:C, 8qc0:D, 8rh3:B, 8rh3:C, 8rh3:D
12	5elx:A	391	36	0.0806	0.0256	0.2778	5.9	3peu:A, 3pev:A, 3pew:A, 3pey:A, 3rrm:A, 3rrn:A
13	6skz:A	2638	66	0.1774	0.0083	0.3333	8.9	6sl0:A, 6sl0:B
14	6sl1:A	2652	66	0.1774	0.0083	0.3333	8.9	6sky:A, 6sky:B

[Back]