BioLiP

>protein
RSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEGDQFIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPIL
CLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAYL

The query sequence (length=126) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4fyh:A	127	126	0.9921	0.9843	0.9921	9.81e-88	4fyh:B, 4fyh:C, 4fyi:A, 4fyi:C, 4fyk:B, 4fyk:D, 4kxl:B, 4kxn:B, 4kxn:C
2	2klh:A	152	142	0.9921	0.8224	0.8803	2.25e-85	4fyh:D, 4fyi:B, 4fyi:D, 4fyk:A, 4fyk:C, 2klh:B, 4kxl:A, 4kxl:C, 4kxl:D, 4kxm:A, 4kxm:B, 4kxm:C, 4kxm:D, 4kxn:A, 4kxn:D, 4p5d:C, 4p5d:A
3	8osc:B	126	122	0.8254	0.8254	0.8525	2.48e-73	8osc:A
4	8qhq:A	143	137	0.8333	0.7343	0.7664	1.33e-70	4p5e:A, 4p5e:B, 8qhq:B, 8qhq:C, 8qhq:D, 8qhq:E, 8qhq:F, 8qhr:A, 8qhr:B
5	2f17:A	255	62	0.1508	0.0745	0.3065	0.64	2f17:B, 1ig3:A, 1ig3:B
6	6skz:A	2638	66	0.1746	0.0083	0.3333	0.72	6sl0:A, 6sl0:B
7	6sl1:A	2652	66	0.1746	0.0083	0.3333	0.72	6sky:A, 6sky:B
8	3s4y:A	224	51	0.1270	0.0714	0.3137	0.76	3s4y:B
9	8v4a:A	466	38	0.1032	0.0279	0.3421	0.96	9bnj:A, 9bnj:B, 9bnj:C, 9bnj:D, 8v2k:A, 8v2k:B, 8v2k:C, 8v2k:D, 8v4a:B, 8v4a:C, 8v4a:D, 8v6p:A, 8v6p:B, 8v6p:C, 8v6p:D, 8v9p:A, 8v9p:B, 8v9p:C, 8v9p:D, 5w19:A, 5w19:B, 5w19:C, 5w19:D
10	3c1o:A	314	48	0.0952	0.0382	0.2500	1.3
11	1f8y:A	156	64	0.1349	0.1090	0.2656	1.4	1f8y:B
12	8rh3:A	156	47	0.1508	0.1218	0.4043	2.8	8pqp:A, 8pqq:A, 8pqq:C, 8pqq:B, 8pqq:D, 8pqr:B, 8pqr:D, 8pqr:A, 8pqr:C, 8qc0:A, 8qc0:B, 8qc0:C, 8qc0:D, 8rh3:B, 8rh3:C, 8rh3:D

[Back]