Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
RSARMCGECEACRRTEDCGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYK

The query sequence (length=54) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3qmb:A 54 54 1.0000 1.0000 1.0000 7.48e-34 3qmc:A, 3qmd:A, 3qmg:A, 3qmh:A, 3qmi:A
2 5w9q:A 56 45 0.5370 0.5179 0.6444 1.51e-12 5w9q:B
3 4o64:A 116 40 0.4815 0.2241 0.6500 1.73e-11 4o64:B, 4o64:C
4 4bbq:A 111 40 0.4444 0.2162 0.6000 2.75e-09 4bbq:B
5 6asb:F 85 30 0.3704 0.2353 0.6667 2.82e-09
6 6asb:I 121 29 0.3704 0.1653 0.6897 2.91e-09 6asb:C, 6asb:L
7 2j2s:A 72 46 0.4259 0.3194 0.5000 7.35e-09 2jyi:A, 2kkf:A, 4nw3:A
8 4pzi:A 61 47 0.4259 0.3770 0.4894 5.14e-08
9 3swr:A 965 42 0.3889 0.0218 0.5000 4.19e-06
10 4wxx:B 1178 42 0.3889 0.0178 0.5000 4.41e-06 3epz:A, 3epz:B, 7lmk:A, 7lmk:B, 7lmk:C, 7lmk:D, 7lmm:A, 7lmm:B, 7lmm:C, 7lmm:D, 3pta:A, 7sfc:A, 7sfd:A, 7sfe:A, 7sff:A, 7sfg:A, 5wvo:C, 4wxx:A, 6x9i:A, 6x9j:A, 6x9k:A, 7xi9:A, 7xib:A, 5ydr:B, 4yoc:A
11 3pt6:B 915 42 0.3889 0.0230 0.5000 9.20e-06 4da4:A, 3pt6:A, 6w8v:A
12 5exh:C 45 47 0.2963 0.3556 0.3404 0.003 4z3c:C
13 8hyj:C 285 23 0.2037 0.0386 0.4783 0.11
14 6asd:C 45 23 0.1852 0.2222 0.4348 0.11
15 2dfv:A 346 27 0.2222 0.0347 0.4444 0.13 2d8a:A, 2dfv:B, 2dfv:C
16 5vc9:C 46 41 0.2778 0.3261 0.3659 0.40 5vc9:F
17 4q47:A 513 54 0.3333 0.0351 0.3333 1.4 4q47:B, 4q48:A, 4q48:B
18 4xsv:A 306 18 0.1667 0.0294 0.5000 1.6 3elb:A
19 6dkh:C 346 33 0.2037 0.0318 0.3333 2.0 6dkh:A, 6dkh:B, 6dkh:D
20 4eez:B 342 24 0.1852 0.0292 0.4167 3.1 4eex:A, 4eex:B, 4eez:A
21 4oh1:A 351 25 0.1852 0.0285 0.4000 3.1
22 1oyw:A 516 16 0.1667 0.0174 0.5625 3.1 1oyy:A
23 1rjw:A 339 7 0.1111 0.0177 0.8571 3.5 3pii:A, 3pii:C, 3pii:B, 3pii:D, 1rjw:B, 1rjw:C, 1rjw:D
24 5w9s:C 44 41 0.2778 0.3409 0.3659 3.9
25 4hp1:C 51 41 0.2593 0.2745 0.3415 4.9 4hp3:C
26 6ifu:A 706 29 0.2037 0.0156 0.3793 5.1
27 6nud:J 741 29 0.2037 0.0148 0.3793 5.1 6ifk:A, 6ifn:A, 6ify:A, 6ifz:A, 6ig0:A, 6nue:J
28 4gkv:B 336 9 0.1111 0.0179 0.6667 5.8 4gkv:C, 4gkv:A, 4gkv:D
29 7bu2:B 339 11 0.1296 0.0206 0.6364 6.2 7bu2:A, 7bu3:A, 7bu3:B
30 3glf:G 378 21 0.1481 0.0212 0.3810 7.1 8giy:B, 8giy:C, 8giy:D, 8giz:B, 8giz:C, 8giz:D, 8gj0:B, 8gj0:C, 8gj0:D, 8gj1:B, 8gj1:C, 8gj1:D, 8gj2:B, 8gj2:C, 8gj2:D, 8gj3:B, 8gj3:C, 8gj3:D, 3glf:B, 3glf:C, 3glf:D, 3glf:H, 3glf:I, 3glg:B, 3glg:C, 3glg:D, 3glg:G, 3glg:H, 3glg:I, 3gli:B, 3gli:C, 3gli:D, 3gli:G, 3gli:H, 3gli:I, 1jr3:A, 1jr3:B, 1jr3:C, 1njf:A, 1njf:B, 1njf:C, 1njf:D, 1njg:A, 1njg:B, 8val:B, 8val:C, 8val:D, 8vam:B, 8vam:C, 8vam:D, 8vap:B, 8vap:C, 8vap:D, 8vaq:B, 8vaq:C, 8vaq:D, 8var:B, 8var:C, 8var:D, 8vas:B, 8vas:C, 8vas:D, 8vat:B, 8vat:C, 8vat:D, 1xxh:B, 1xxh:C, 1xxh:D, 1xxh:G, 1xxh:H, 1xxh:I, 1xxi:B, 1xxi:C, 1xxi:D, 1xxi:G, 1xxi:H, 1xxi:I

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218