BioLiP

>protein
RPTVFRWTGGGKEVYLSGSFNNWSKLPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKK
TDFEVFDALMVDSQKCSDGPYHQEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKD
GVMVLSATHRYKKKYVTTLLYKPI

The query sequence (length=184) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	7myj:D	187	188	0.9783	0.9626	0.9574	8.20e-130	6b1u:B, 6b1u:D, 8bik:B, 8bik:E, 6c9f:B, 6c9g:B, 6c9j:B, 4cfe:B, 4cfe:D, 4cff:B, 4cff:D, 5ezv:B, 5ezv:D, 5iso:B, 5iso:D, 7myj:B, 4yef:A, 4yef:B, 4yef:C, 4yef:D, 4yef:E, 4yef:F, 4yef:G, 1z0m:A, 1z0m:B, 1z0m:C, 1z0n:A, 1z0n:B, 1z0n:C, 4zhx:B, 4zhx:D
2	6c9h:B	168	184	0.8859	0.9702	0.8859	3.37e-116	6e4t:B, 6e4u:B, 6e4w:B, 5kq5:B, 4qfr:B, 4qfs:B, 5t5t:B, 5ufu:B
3	6b2e:B	193	185	0.7989	0.7617	0.7946	1.70e-104	4cfh:B, 4rer:B, 4yee:A, 4yee:G, 4yee:B, 4yee:C, 4yee:D, 4yee:N, 4yee:E, 4yee:F, 4yee:H, 4yee:I, 4yee:J, 4yee:K, 4yee:L, 4yee:M, 4yee:O, 4yee:P, 4yee:Q, 4yee:R
4	2qrd:D	92	57	0.1630	0.3261	0.5263	1.52e-14	2qr1:B, 2qr1:D, 2qrc:B, 2qrc:D, 2qrd:B
5	4pyh:A	293	73	0.1467	0.0922	0.3699	3.84e-07
6	8dl1:A	713	51	0.0924	0.0238	0.3333	0.46	8dge:A, 8dge:B, 8dge:C, 8dge:D, 8dl1:B, 8dl1:C, 8dl1:D, 8dl2:A, 8dl2:B, 8dl2:C, 8dl2:D
7	3c28:A	299	105	0.1467	0.0903	0.2571	1.2
8	5avp:A	240	83	0.1087	0.0833	0.2410	4.0	5avp:B, 5avp:C, 5avp:D
9	5kdi:A	211	49	0.0870	0.0758	0.3265	6.4	5kdi:B
10	6w1s:I	1077	60	0.0924	0.0158	0.2833	8.1
11	8u2m:B	382	75	0.1033	0.0497	0.2533	9.1	8u2m:A, 8u2m:C, 8u3n:A, 8u3n:B, 8u3n:C, 8ukz:A, 8ukz:B, 8ukz:C
12	7esn:A	435	31	0.0652	0.0276	0.3871	9.4	7esk:A, 7esm:A, 8i4d:A, 7yqs:A
13	5kqi:A	714	48	0.0815	0.0210	0.3125	9.5	6b9b:A, 6b9b:B, 6caw:A, 6caw:B, 6cc6:A, 6cc6:B, 6cdq:A, 6cdq:B, 6cek:A, 6cek:B, 6cfq:A, 6cfq:B, 5kq0:A, 5kq0:B, 5kq2:A, 5kq2:B, 5kq3:A, 5kq3:B, 5kq6:A, 5kq6:B, 5kqh:A, 5kqh:B, 5kqi:B, 5kqk:A, 5kqk:B, 5kqn:A, 5kqn:B, 5kqq:A, 5kqq:B, 5ksf:A, 5ksf:B, 5ksg:A, 5ksg:B, 5ksk:A, 5ksk:B, 5ksn:A, 5ksn:B, 5kt8:A, 5kt8:B, 5kt9:A, 5kt9:B, 5l02:A, 5l02:B, 5l05:A, 5l05:B, 6mpy:A, 6mpy:B, 6mq0:A, 6mq0:B, 6mq1:A, 6mq1:B, 5sw4:A, 5sw4:B, 5sw5:A, 5sw5:B, 5sw6:A, 5sw6:B, 5sx0:A, 5sx0:B, 5sx1:A, 5sx1:B, 5sx2:A, 5sx2:B, 5sx3:A, 5sx3:B, 5sx6:A, 5sx6:B, 5sx7:A, 5sx7:B, 5sxq:A, 5sxq:B, 5sxr:A, 5sxr:B, 5sxs:A, 5sxs:B, 5sxt:A, 5sxt:B, 5sxw:A, 5sxw:B, 5sxx:A, 5sxx:B, 5syh:A, 5syh:B, 5syi:A, 5syi:B, 5syj:A, 5syj:B, 5syk:A, 5syk:B, 5syl:A, 5syl:B, 5syu:A, 5syu:B, 5syv:A, 5syv:B, 5syw:A, 5syw:B, 5syx:A, 5syx:B, 5syy:A, 5syy:B, 5txq:A, 5txq:B, 5v4o:A, 5v4o:B, 5v53:A, 5v53:B

[Back]