BioLiP

>protein
RPDFCLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTCGGA

The query sequence (length=58) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4bnr:J	58	58	0.9655	0.9655	0.9655	4.11e-37	1bhc:J, 4bnr:I, 1bpi:A, 1bz5:A, 2fi3:I, 2fi4:I, 2fi5:I, 3fp7:J, 2ftl:I, 2ftm:B, 3ldj:B, 3ldj:C, 6pti:A, 1qlq:A
2	4bqd:A	78	52	0.3448	0.2564	0.3846	1.66e-08	4bqd:B
3	5nx1:D	42	41	0.3103	0.4286	0.4390	3.94e-07	5nx3:D
4	5jbt:Y	38	36	0.2586	0.3947	0.4167	7.96e-06
5	2knt:A	58	53	0.2759	0.2759	0.3019	2.54e-05	1knt:A
6	7mbp:A	996	21	0.2241	0.0131	0.6190	0.29	7mbp:B, 7mbp:C, 7mbp:D, 7mbq:A, 7mbq:B, 7mbq:C, 7mbq:D, 7mbr:A, 7mbr:B, 7mbr:C, 7mbr:D, 7mbs:A, 7mbs:B, 7mbs:C, 7mbs:D, 7mbt:A, 7mbt:D, 7mbt:B, 7mbt:C, 7mbu:A, 7mbu:D, 7mbu:B, 7mbu:C, 7mbv:A, 7mbv:B, 7mbv:C, 7mbv:D
7	2pfy:A	301	40	0.2759	0.0532	0.4000	0.53	2pfy:B, 2pfy:C, 2pfy:D
8	7ml3:7	548	34	0.2069	0.0219	0.3529	3.2
9	7zsa:7	616	34	0.2069	0.0195	0.3529	3.2	8cen:7, 8ceo:7, 7o4i:7, 7o4j:7, 7o4k:7, 7o4l:7, 7o72:7, 7o73:7, 7o75:7, 7zs9:7, 7zsb:7
10	7k04:7	638	34	0.2069	0.0188	0.3529	3.2	5fmf:1, 7m2u:7, 7ml0:7, 7ml1:7, 7ml2:7, 5sva:Z
11	6ffn:A	182	25	0.1552	0.0495	0.3600	3.8	1cqq:A, 6ffs:A, 5fx5:A, 5fx6:A, 2xya:A
12	2wr8:A	258	24	0.1897	0.0426	0.4583	6.0	1wu8:A, 1wu8:B, 1wu8:C
13	8btd:SC	210	42	0.2931	0.0810	0.4048	6.0	8br8:SC, 8brm:SC, 8bsi:SC, 8bsj:SC, 8btr:SC, 8fvy:D, 8g4s:D, 7pwf:D, 7pwo:D1

[Back]