BioLiP

>protein
RKTRHDPPAKSKAGRVATPPAVDPTEFFVLTERYRQYRQTVRALRLEFMSEVRKKLHEARAGVQAERKAQEDAAEHRELM
AWNQAENQRLHELRLARLRQEALEQERRQAEEAVLQAREAQAWAQLKEQEVLQLQEEAKTFITRENLEARVEEALDSPKS
YNWAITREGLVVRPQQK

The query sequence (length=177) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5aj3:d	177	177	1.0000	1.0000	1.0000	1.07e-124	5aj4:Ad, 6gaw:Ad, 6gaz:Ad, 7nqh:Ad, 7nql:Ad, 7nsi:Ad, 7nsj:Ad, 8oin:AU, 8oip:AU, 6ydp:Ad, 6ydw:Ad
2	3jd5:d	176	175	0.8531	0.8580	0.8629	6.60e-95	6neq:d, 6nf8:d
3	7pnt:U	174	173	0.7571	0.7701	0.7746	3.05e-91	7pnu:U, 7pnv:U, 7pnw:U
4	7l08:AU	177	177	0.7853	0.7853	0.7853	1.47e-85	7a5f:U6, 7a5g:U6, 7a5i:U6, 7a5k:U6, 8any:AU, 8csp:U, 8csq:U, 8csr:U, 8css:U, 8cst:U, 8csu:U, 3j9m:AU, 8k2a:Sb, 6nu2:AU, 6nu3:AU, 7og4:AU, 8oir:AU, 8ois:AU, 7p2e:U, 7pnx:U, 7pny:U, 7pnz:U, 7po0:U, 7po1:U, 7po2:U, 7po3:U, 7qi4:AU, 7qi5:AU, 7qi6:AU, 8qrk:U, 8qrl:U, 8qrm:U, 8qrn:U, 6rw4:U, 6rw5:U, 6vlz:AU, 6vmi:AU, 8xt0:Sb, 8xt2:Sb, 6zm5:AU, 6zm6:AU, 6zs9:AU, 6zsa:AU, 6zsb:AU, 6zsc:AU, 6zsd:AU, 6zse:AU, 6zsg:AU
5	8asd:A	1826	97	0.1299	0.0126	0.2371	0.41
6	8asb:A	1715	97	0.1299	0.0134	0.2371	0.41	8as6:A, 8asg:A, 8r6u:A
7	8r6y:A	1991	97	0.1299	0.0116	0.2371	0.43	8as7:A, 8r6w:A, 6xya:B
8	7alp:U	1935	97	0.1299	0.0119	0.2371	0.49
9	7udu:D	701	140	0.2034	0.0514	0.2571	0.88	7rb8:D
10	7pkq:w	155	33	0.0621	0.0710	0.3333	2.5
11	6zu5:LE0	179	52	0.0847	0.0838	0.2885	3.4
12	7yfr:A	691	43	0.0960	0.0246	0.3953	4.9	7yfr:C
13	3dh9:A	482	76	0.1243	0.0456	0.2895	5.5	3dgh:A, 3dgh:B, 3dh9:B, 2nvk:X
14	5ty0:A	378	28	0.0621	0.0291	0.3929	8.6
15	8anp:D	391	63	0.0734	0.0332	0.2063	9.2
16	7ayx:B	396	39	0.0678	0.0303	0.3077	9.6	7ayx:A

[Back]