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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
RILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVIGDIVTVGECRPLSKTVFNVLKVTKA

The query sequence (length=76) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6fec:G 158 78 1.0000 0.4810 0.9744 6.28e-48 7a01:G3, 7a09:n, 5a2q:L, 5aj0:BL, 9bdl:AS11, 9bdn:AS11, 9bdp:AS11, 8bhf:M3, 9bkd:B, 9bln:B, 8btk:Ak, 7cpu:SL, 7cpv:SL, 4d5l:L, 4d61:L, 6d90:MM, 6d9j:MM, 9f1b:Ak, 9f1c:Ak, 9f1d:Ak, 5flx:L, 6g18:L, 6g4s:L, 6g4w:L, 6g51:L, 6g53:L, 6g5h:L, 6g5i:L, 8g5y:SL, 8g5z:SL, 8g60:SL, 8g61:SL, 8g6j:SL, 8glp:SL, 6gz3:BL, 6gz4:BL, 6gz5:BL, 6hcf:M1, 6hcj:M2, 6hcm:M1, 6hcq:M2, 8ifd:2v, 8ife:2v, 6ip5:2v, 6ip6:2v, 6ip8:2v, 3j7p:SL, 3j7r:SL, 3jag:LL, 3jah:LL, 3jai:LL, 3jaj:SL, 3jan:SL, 8jdj:8, 8jdk:8, 8jdl:8, 8jdm:8, 7jqb:O, 7jqc:O, 5k0y:G, 8k2c:SL, 7k5i:L, 4kzx:L, 4kzy:L, 4kzz:L, 5lks:SL, 7ls1:w2, 7ls2:w2, 5lzs:LL, 5lzt:LL, 5lzu:LL, 5lzv:LL, 5lzw:LL, 5lzx:LL, 5lzy:LL, 5lzz:LL, 7mdz:LL, 7mq8:LD, 7mq9:LD, 7mqa:LD, 6mtb:LL, 6mtc:LL, 6mtd:LL, 6mte:LL, 7nwg:M2, 7nwh:LL, 7nwi:LL, 7o7y:Ak, 7o7z:Ak, 7o80:Ak, 7o81:Ak, 5oa3:L, 6ole:SL, 6olf:SL, 6olg:BL, 6oli:SL, 6olz:BL, 6om0:SL, 6om7:SL, 7oya:L2, 7oyb:L2, 7oyc:L2, 7oyd:LL, 8oz0:X, 8p03:N, 8p09:N, 8p2k:Ak, 6p4g:M, 6p4h:M, 6p5i:M, 6p5j:M, 6p5k:M, 6p5n:M, 8pj1:B, 8pj2:B, 8pj3:B, 8pj4:B, 8pj5:B, 8pj6:B, 8ppk:L, 8ppl:AL, 8q7z:Ak, 8q87:Ak, 7qgg:SL, 8qoi:SL, 7qp6:B, 7qp7:B, 7qvp:SL, 7qvp:RL, 6qzp:SL, 7r4x:L, 6r5q:EE, 6r6g:EE, 6r6p:EE, 6r7q:EE, 8scb:LL, 6sgc:M1, 7syg:M, 7syh:M, 7syi:M, 7syj:M, 7syk:M, 7syl:M, 7sym:M, 7syn:M, 7syo:M, 7syp:M, 7syq:M, 7syr:M, 7sys:M, 7syt:M, 7syu:M, 7syv:M, 7syw:M, 7syx:M, 5t2c:Aw, 8t4s:L, 7toq:AS11, 7tor:AS11, 7tql:L, 7ucj:LL, 7uck:LL, 4ug0:SL, 4ujc:CL, 4ujd:CL, 4uje:BL, 4v5z:Aq, 4v6x:AL, 5vyc:L1, 5vyc:L2, 5vyc:L3, 5vyc:L4, 5vyc:L5, 5vyc:L6, 6w2s:M, 6w2t:M, 7wts:L, 7wtt:L, 7wtu:L, 7wtv:L, 7wtw:L, 7wtx:L, 7wtz:L, 7wu0:L, 6xa1:SL, 7xnx:SL, 7xny:SL, 8xsx:SL, 8xsy:SL, 8xsz:SL, 8xxl:SL, 8xxm:SL, 8xxn:SL, 6y0g:SL, 8y0w:SL, 8y0x:SL, 6y2l:SL, 6y57:SL, 6yal:N, 6yam:N, 6yan:N, 6ybw:B, 8yoo:SL, 8yop:SL, 6z6l:SL, 6z6m:SL, 6z6n:SL, 7zjw:SW, 7zjx:SW, 6zlw:L, 6zm7:SL, 6zme:SL, 6zmi:SL, 6zmo:SL, 6zmt:L, 6zmw:B, 6zn5:L, 6zoj:L, 6zok:L, 6zon:n, 6zp4:n, 6zuo:L, 6zv6:L, 6zvh:L, 6zvj:n, 6zvk:G3, 6zxd:L, 6zxe:L, 6zxf:L, 6zxg:L, 6zxh:L
2 4v6w:AL 155 78 0.8289 0.4065 0.8077 1.61e-38 6xu6:AL, 6xu7:AL, 6xu8:AL
3 6uz7:L 145 77 0.6974 0.3655 0.6883 3.70e-34
4 9bh5:AL 143 76 0.7368 0.3916 0.7368 6.52e-34 9cai:AL
5 5dat:C1 155 77 0.7105 0.3484 0.7013 7.59e-34 7a1g:X, 7ajt:DL, 7aju:DL, 7b7d:X, 8bn3:C1, 8bqd:X, 8bqx:X, 8c00:X, 8c01:X, 8c83:X, 8cah:X, 8cas:X, 8cbj:L, 8ccs:o, 8cdl:o, 8cdr:o, 8ceh:o, 8cf5:o, 8cg8:o, 8cgn:o, 8civ:o, 8cku:o, 8cmj:o, 7d4i:SM, 7d5t:SM, 7d63:SM, 5dat:c1, 5dc3:C1, 5dc3:c1, 5dge:C1, 5dge:c1, 5dgf:C1, 5dgf:c1, 5dgv:C1, 5dgv:c1, 6eml:X, 8eub:BL, 8evp:BL, 8evq:BL, 8evr:BL, 8evs:BL, 8evt:BL, 8ewb:BL, 8ewc:BL, 6fai:L, 5fci:C1, 5fci:c1, 5fcj:C1, 5fcj:c1, 6fyx:L, 6fyy:L, 6gq1:AB, 6gqb:AB, 6gqv:AB, 6gsm:L, 6gsn:L, 6hhq:M, 6hhq:c1, 5i4l:C1, 5i4l:c1, 6i7o:X, 6i7o:Xb, 8i7j:L, 5it7:L, 5it9:L, 3j6x:11, 3j6y:11, 3j77:11, 3j78:11, 3j80:L, 3j81:L, 3jam:L, 3jap:L, 5juo:IB, 5jup:IB, 5jus:IB, 5jut:IB, 5juu:IB, 8k2d:SL, 8k82:SL, 6ke6:SM, 5ll6:X, 6lqp:SM, 6lqq:SM, 6lqr:SM, 6lqs:SM, 6lqt:SM, 6lqu:SM, 6lqv:SM, 5lyb:C1, 5lyb:c1, 5m1j:L2, 5mc6:X, 5mei:c1, 5mei:M, 7mpi:BL, 7mpj:BL, 7n8b:BL, 5ndg:C1, 5ndg:c1, 5ndv:C1, 5ndv:c1, 5ndw:C1, 5ndw:c1, 7nrc:SX, 7nrd:SX, 5obm:C1, 5obm:c1, 5on6:c1, 5on6:M, 7osa:uS17, 7osm:uS17, 6q8y:X, 6rbd:L, 6rbe:L, 7rr5:SL, 8rw1:L, 6s47:BM, 8s8d:L, 8s8e:L, 8s8f:L, 8s8g:L, 8s8h:L, 8s8i:L, 8s8j:L, 6snt:L, 7suk:LD, 6sv4:X, 6sv4:Xb, 6sv4:Xc, 6t4q:SL, 6t7i:SL, 6t7t:SL, 6t83:Lb, 6t83:m, 5tbw:M, 5tbw:c1, 6tb3:X, 5tga:C1, 5tga:c1, 5tgm:C1, 5tgm:c1, 6tnu:X, 5tzs:D, 4u3m:C1, 4u3m:c1, 4u3n:C1, 4u3n:c1, 4u3u:C1, 4u3u:c1, 4u4n:C1, 4u4n:c1, 4u4o:C1, 4u4o:c1, 4u4q:C1, 4u4q:c1, 4u4r:C1, 4u4r:c1, 4u4u:C1, 4u4u:c1, 4u4y:C1, 4u4y:c1, 4u4z:C1, 4u4z:c1, 4u50:C1, 4u50:c1, 4u51:C1, 4u51:c1, 4u52:C1, 4u52:c1, 4u53:C1, 4u53:c1, 4u55:C1, 4u55:c1, 4u56:C1, 4u56:c1, 4u6f:C1, 4u6f:c1, 4uer:Q, 4v4b:AQ, 4v6i:AP, 4v7h:AQ, 4v7r:AF, 4v7r:CF, 4v88:AL, 4v88:CL, 4v8y:AL, 4v8z:AL, 4v92:BL, 6wdr:L, 5wlc:LD, 6woo:LL, 7wtl:SL, 7wtm:SL, 7wtn:SL, 7wto:SL, 7wtp:SL, 7wtq:SL, 7wtr:SL, 5wyj:SM, 5wyk:SM, 6xiq:AB, 6xir:AB, 8y0u:SL, 6y7c:L, 6z6j:SL, 6z6k:SL, 6zce:M, 7zpq:AL, 6zqb:DL, 6zqc:DL, 6zqd:DL, 6zqe:DL, 6zqf:DL, 6zqg:DL, 7zrs:AL, 6zu9:X, 7zuw:AL, 7zux:DL, 6zvi:t, 7zw0:sX
6 8c3a:N 144 75 0.6711 0.3542 0.6800 2.28e-33 8c3a:CY, 8cq7:N, 8cq7:CY, 8cqw:N, 8cqw:CY, 8cre:N, 8cre:CY, 8oeq:N, 8oeq:CY, 7pzy:M, 7q08:M, 7q0f:M, 7q0p:M, 7q0r:M, 8q5i:M
7 3j7a:V 146 76 0.7105 0.3699 0.7105 1.09e-32 3jbn:V, 3jbo:V, 3jbp:V, 6okk:V, 8tpu:SV
8 7pwf:L 181 74 0.6579 0.2762 0.6757 1.69e-32 8br8:SM, 8brm:SM, 8bsi:SM, 8bsj:SM, 8btd:SM, 8btr:SM, 8fvy:L, 8g4s:L, 7pwo:L1
9 5oql:v 157 74 0.6711 0.3248 0.6892 3.46e-31 7olc:SL, 7old:SL, 8oo0:SL, 7r81:M2, 6rxu:Ck, 6rxv:Ck, 6rxx:Ck, 6rxz:Ck, 7z3n:SL, 7z3o:SL
10 7qix:J 147 77 0.6447 0.3333 0.6364 3.60e-31 8auv:X, 8b2l:X1, 7qiz:z
11 5xxu:L 147 77 0.6579 0.3401 0.6494 7.65e-31
12 5jpq:y 157 74 0.6053 0.2930 0.6216 1.85e-30 4bts:AQ, 4bts:BQ, 4bts:CQ, 4bts:DQ, 4v5o:AQ, 4v5o:BQ
13 8jiw:BL 152 77 0.6184 0.3092 0.6104 8.30e-30 8r6f:L, 4v3p:SP, 4v7e:BL
14 4v8m:AE 160 74 0.6316 0.3000 0.6486 1.93e-29 8ova:AE, 8ove:AE
15 7ase:X 148 74 0.6316 0.3243 0.6486 2.88e-29 5opt:X
16 6zj3:SU 148 74 0.6316 0.3243 0.6486 6.66e-29
17 8ip8:ib 145 74 0.5921 0.3103 0.6081 7.98e-29 8ip9:ib, 8ipa:ib, 8ipb:ib
18 5xyi:L 142 77 0.6447 0.3451 0.6364 1.03e-28
19 8ovj:SU 158 74 0.5921 0.2848 0.6081 1.56e-27 8a3w:SU, 8a98:SU, 6az1:U, 8rxh:SU, 8rxx:SU, 5t2a:AE
20 7qep:C1 141 73 0.5132 0.2766 0.5342 2.70e-22
21 8p5d:SL0 150 67 0.5000 0.2533 0.5672 1.15e-21 8p60:SL0, 8p60:RL0, 7qca:SL0
22 6zu5:SL0 133 68 0.4737 0.2707 0.5294 1.04e-18
23 6rm3:SL0 157 73 0.4868 0.2357 0.5068 4.26e-17
24 6skf:As 108 66 0.3421 0.2407 0.3939 1.51e-13 6skg:As, 6th6:As
25 5jb3:R 113 66 0.3421 0.2301 0.3939 2.27e-13 5jbh:R, 6sw9:R, 6swc:R, 6swd:R, 4v4n:BR, 4v6u:AR, 7zag:R, 7zah:R, 7zai:R, 7zhg:R
26 6tmf:S 111 76 0.3947 0.2703 0.3947 1.34e-12
27 8hkx:S17P 111 73 0.3421 0.2342 0.3562 1.47e-11 8hky:S17P, 8hkz:S17P, 8hl1:S17P, 8hl2:S17P, 8hl3:S17P, 8hl4:S17P, 8hl5:S17P, 8wkp:S17P, 8wq2:S17P, 8wq4:S17P
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30 6xyw:Bp 78 64 0.3158 0.3077 0.3750 8.31e-05
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33 7jil:v 80 66 0.3553 0.3375 0.4091 0.004
34 6z1p:Bq 176 64 0.2368 0.1023 0.2812 0.025
35 7pua:CQ 247 72 0.2895 0.0891 0.3056 0.032 7ane:k, 7aor:k, 6hiv:CQ, 6hiw:CQ, 6hiy:CQ, 7pub:CQ, 6sga:CQ, 6sgb:CQ
36 5myj:AQ 82 69 0.2895 0.2683 0.3188 0.28
37 6dzi:5 94 62 0.2763 0.2234 0.3387 0.39 6dzk:Q, 8fr8:r, 5o5j:Q, 5o61:BQ, 8v9j:q, 8v9k:q, 8v9l:q, 8whx:r, 8wi7:r, 8wi9:r, 8wib:r, 8wid:r, 8wif:r, 5zeb:q, 5zep:q, 5zeu:q
38 8a22:Bq 130 64 0.3026 0.1769 0.3594 0.43 8apn:Bq, 8apo:Bq
39 8fmw:Q 82 65 0.3026 0.2805 0.3538 0.53
40 8om2:Q 235 64 0.2763 0.0894 0.3281 0.56 8d8j:Q, 8d8k:Q, 8d8l:Q, 5mrc:QQ, 5mre:QQ, 5mrf:QQ, 8om3:Q, 8om4:Q
41 3j9w:AQ 86 69 0.2895 0.2558 0.3188 0.60 8buu:q, 8cdu:Q, 8cdv:Q, 8cec:Q, 8ced:Q, 8cee:Q, 6ha1:q, 6ha8:q, 6htq:q, 5njt:Q, 7o5b:Q, 8qcq:q, 7qgu:v, 7qh4:u, 8qpp:Q, 7qv1:q, 7qv2:q, 7qv3:q, 8r55:Q
42 7msc:q 95 62 0.2763 0.2211 0.3387 0.71 7kgb:q, 7msh:q, 7msm:q, 7msz:q, 7mt2:q, 7mt3:q, 7mt7:q, 7sfr:q, 5v93:q, 5xyu:Q
43 7bgd:q 86 66 0.2632 0.2326 0.3030 1.1 7aso:8, 7asp:h, 8bh6:q, 8bh7:q, 8byv:q, 6fxc:Aq, 6fxc:Bq, 7kwg:q, 5li0:q, 5nd8:q, 5nd9:q, 5ngm:Aq, 7nhl:r, 7nhm:r, 8p2f:r, 8p2g:r, 8p2h:r, 7p48:q, 6s0x:q, 6s13:q, 5t7v:S8, 5tcu:S8, 8y38:q, 8y39:q, 6yef:q
44 8rd8:QZ 79 69 0.2895 0.2785 0.3188 1.1 8rdv:QZ, 8rdw:QZ
45 8uu7:q 81 77 0.3026 0.2840 0.2987 1.1 7nhn:r, 8uu4:q, 8uu5:q, 8uu6:q, 8uu8:q, 8uu9:q
46 6o8w:q 83 24 0.1711 0.1566 0.5417 1.3 7nhk:r, 6o8x:q, 6o8y:q, 6o8z:q, 6o90:q, 7p7q:r, 7p7r:r, 7p7s:r, 7p7t:r, 7p7u:r, 6w6p:q, 6wub:q
47 2fko:A 173 51 0.2105 0.0925 0.3137 1.4 1v3w:A, 1v67:A
48 7pl9:A 994 38 0.1447 0.0111 0.2895 1.5 7pl9:B, 7pl9:C, 7pl9:D, 7pl9:E
49 5mmj:q 86 16 0.1184 0.1047 0.5625 1.9 6eri:BQ, 5mmm:q, 5x8p:q, 5x8r:q
50 8tj5:P 1641 34 0.1579 0.0073 0.3529 2.5 8tj5:N
51 7pub:CJ 803 30 0.1316 0.0125 0.3333 3.8 6hiv:CJ, 6hiw:CJ, 6hiz:CJ, 7pua:CJ
52 4v61:AQ 83 39 0.1842 0.1687 0.3590 6.2

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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