BioLiP

>protein
RGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDP

The query sequence (length=67) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	6fqp:A	67	67	1.0000	1.0000	1.0000	1.82e-46	6fqp:B, 6fqq:A, 6fqq:B, 6fqq:D, 6fqq:E
2	4xrm:B	64	59	0.4478	0.4688	0.5085	1.61e-17	5bng:B, 5bng:A, 5eg0:A, 5ego:A, 8vts:B, 8vts:D, 8vtt:D, 4xrm:A, 4xrs:A, 4xrs:B
3	1lfu:P	82	59	0.3284	0.2683	0.3729	2.79e-10	1b72:B, 1b8i:B, 4cyc:B, 1puf:B, 2r5y:B, 2r5z:B, 4uus:B, 4uus:F, 5zjq:B, 5zjr:B, 5zjs:B, 5zjt:B
4	4egc:A	539	48	0.3582	0.0445	0.5000	2.12e-07
5	1mnm:C	77	51	0.2687	0.2338	0.3529	3.43e-04	1mnm:D
6	1akh:B	78	49	0.2687	0.2308	0.3673	4.06e-04	1apl:C, 1apl:D, 1k61:A, 1k61:B, 1k61:C, 1k61:D, 1le8:B, 1yrn:B
7	2d5v:A	135	35	0.2388	0.1185	0.4571	0.014	2d5v:B, 8t0f:A, 8t11:A
8	2cw9:A	182	40	0.2537	0.0934	0.4250	0.15
9	5zjr:A	64	35	0.2090	0.2188	0.4000	0.27	5zjq:A, 5zjs:A, 5zjt:A, 5zjt:E
10	5eea:G	63	41	0.1940	0.2063	0.3171	0.55	8byx:B, 8byx:J, 8byx:A, 8byx:K, 8byx:G, 8byx:L, 5edn:A, 5edn:B, 5edn:G, 5edn:J, 5eea:B, 5eea:A, 5eea:J, 5ef6:A, 5ef6:J, 5ef6:B, 5ef6:G, 5eg0:B, 5ego:B, 5no6:A, 5no6:B, 7psx:A, 7psx:B, 7psx:G, 7psx:J
11	4rh7:A	3005	49	0.2388	0.0053	0.3265	1.0
12	6sc2:B	3930	49	0.2388	0.0041	0.3265	1.2	6rla:A, 6rla:B, 6sc2:A
13	3q9n:A	138	70	0.2537	0.1232	0.2429	2.1	3q9n:B, 3q9u:A, 3q9u:B
14	1le8:A	53	27	0.1642	0.2075	0.4074	2.3	1akh:A, 1yrn:A
15	3lrp:A	181	27	0.1343	0.0497	0.3333	3.0
16	4n83:A	285	25	0.1194	0.0281	0.3200	3.1	4n83:B, 4n83:C, 4n83:D, 4n83:E, 4n83:F, 4n83:G, 4n83:H
17	6pd2:C	616	23	0.1343	0.0146	0.3913	5.0	6pd1:A, 6pd1:B, 6pd1:D, 6pd2:A, 6pd2:B, 6pd2:D
18	1fjl:A	65	32	0.1791	0.1846	0.3750	5.0	1fjl:B, 1fjl:C
19	1zq3:P	68	24	0.1940	0.1912	0.5417	5.9
20	2d5a:A	142	41	0.1642	0.0775	0.2683	6.9	2e6u:X
21	4j19:A	77	23	0.1343	0.1169	0.3913	8.7	4j19:B
22	4v4s:AY	365	34	0.1343	0.0247	0.2647	8.7	6c5l:AY, 6c5l:CY, 4v5e:AY, 4v5e:CY, 4v5j:AY, 4v5j:CY, 4v67:AX, 4v67:CX, 4v9n:AY, 4v9n:CY
23	5bp4:R	637	14	0.1194	0.0126	0.5714	9.1	5bp4:O, 5bp4:Q
24	5bp4:L	897	14	0.1194	0.0089	0.5714	9.2	5bp4:I
25	5bp4:A	1102	14	0.1194	0.0073	0.5714	9.3	5bp2:A, 5bp4:B, 5bp4:C, 5bp4:D, 5bp4:E, 5bp4:F, 5bp4:G, 5bp4:H, 5bp4:J, 5bp4:K, 5bp4:M, 5bp4:N, 5bp4:P
26	7d56:C	640	19	0.1194	0.0125	0.4211	9.4	7d56:B, 7d56:A, 7d5r:A, 7d5r:B, 7d8n:A, 7d8n:B, 7dan:C, 7dan:B, 7dan:A
27	7c9m:C	260	42	0.2239	0.0577	0.3571	9.6	7c7m:A, 7c9m:A, 7c9m:B, 7c9m:D

[Back]