BioLiP

>protein
RFLCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAIS
PGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTE
YCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKG
RSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRDVLYSPQMALKLALTEWLQEFGVPHQY

The query sequence (length=309) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5m7t:A	451	309	0.9871	0.6763	0.9871	0.0	5m7s:A, 5m7s:B, 5m7t:B, 5m7u:A, 5m7u:B, 7ou6:AAA, 7ou6:BBB, 6pm9:A, 6pm9:B, 6pm9:C, 6pm9:D, 5uhl:A, 5uhl:C, 5uho:A, 5uho:C
2	7yeh:C	344	309	0.9644	0.8663	0.9644	0.0
3	5vvx:C	431	304	0.9579	0.6868	0.9737	0.0	5un8:A, 5un8:C, 5un8:B, 5un8:D, 5un9:A, 5un9:B, 5vvt:A, 5vvt:C, 5vvu:A, 5vvu:C, 5vvv:A, 5vvv:C
4	7khs:A	449	302	0.3883	0.2673	0.3974	2.47e-78	7khs:B, 7khs:D, 2xsb:A
5	7khs:C	427	302	0.3657	0.2646	0.3742	4.66e-67
6	5diy:A	463	304	0.3463	0.2311	0.3520	3.50e-55	5diy:B
7	7ou8:AAA	714	270	0.3236	0.1401	0.3704	5.33e-49	5abe:A, 5abe:B, 5abf:A, 5abf:B, 5abg:A, 5abg:B, 5abh:A, 5abh:B, 4ais:A, 4ais:B, 4aiu:A, 2chn:A, 2chn:B, 2cho:A, 2cho:B, 5fky:A, 5fky:B, 5fl0:A, 5fl0:B, 5fl1:A, 5fl1:B, 2j47:A, 2j4g:A, 2j4g:B, 2jiw:A, 2jiw:B, 7k41:A, 5mi4:A, 5mi5:A, 5mi6:A, 5mi7:A, 7ou8:BBB, 4ur9:A, 4ur9:B, 2vvn:A, 2vvn:B, 2vvs:A, 2w4x:A, 2w66:A, 2w66:B, 2w67:A, 2w67:B, 2wca:A, 2wzh:A, 2wzi:A, 2wzi:B, 2x0h:A, 2x0h:B, 2xj7:A, 2xj7:B, 2xm1:A, 2xm1:B, 2xm2:A, 2xm2:B
8	2v5d:A	722	278	0.3074	0.1316	0.3417	3.62e-44	2cbi:A, 2cbi:B, 2cbj:A, 2cbj:B, 2j1a:A, 2j1e:A, 2j62:A, 2j62:B, 2j7m:A, 7khv:A, 7khv:B, 7khv:C, 7khv:D, 7khv:E, 7khv:F, 5oxd:A, 6rhe:A, 2v5c:A, 2v5c:B, 2vur:A, 2vur:B, 2wb5:A, 2wb5:B, 2x0y:A, 2x0y:B, 2xpk:A, 2xpk:B, 2ydq:A, 2ydr:A, 2yds:A, 4zxl:A
9	6pv4:C	608	293	0.2460	0.1250	0.2594	2.09e-23	6pv4:A, 6pv4:B, 6pv4:D
10	3rf7:A	362	40	0.0388	0.0331	0.3000	0.41
11	2a0i:A	293	164	0.1424	0.1502	0.2683	0.41
12	4ged:A	268	59	0.0647	0.0746	0.3390	0.88	5al9:A, 5ala:A, 5ala:B, 5amm:A, 5amm:B, 3riv:A, 3riv:B, 3riw:A, 3riw:B
13	7f4v:aF	151	57	0.0550	0.1126	0.2982	1.1	7f4v:bF, 7f4v:cF
14	5l22:B	540	65	0.0615	0.0352	0.2923	1.4	5l22:A
15	5zzo:F	199	109	0.0777	0.1206	0.2202	2.2	5zzo:A, 5zzo:B, 5zzo:C, 5zzo:D, 5zzo:E
16	8dmu:A	476	87	0.0874	0.0567	0.3103	2.7	8dmu:B, 8dmu:C, 8dmu:D
17	3j9w:BJ	123	77	0.0583	0.1463	0.2338	3.8	7as8:L, 7as9:L, 5njt:b, 7o5b:p, 7ope:L, 7qgu:H, 7qh4:H, 6tnn:b, 6tpq:b
18	6ji2:A	432	67	0.0550	0.0394	0.2537	5.1	4cxg:A, 4cxh:A, 6ji2:E, 3vmf:A, 3wxm:A, 3wxm:C, 3wxm:E, 3wxm:G
19	7t9g:A	445	73	0.0518	0.0360	0.2192	7.2	4f35:D, 4f35:A, 4f35:C, 6okz:C, 6okz:B, 7t9g:Y, 6wtx:C, 6wtx:D, 6wtx:A, 6wtx:B
20	7x2u:A	541	39	0.0421	0.0240	0.3333	7.7	7x2u:B
21	8r3q:D	676	50	0.0615	0.0281	0.3800	8.0	8r3q:B, 8r3q:A, 8r3q:C
22	1kq3:A	364	39	0.0421	0.0357	0.3333	8.6
23	5k8c:A	358	40	0.0356	0.0307	0.2750	9.8

[Back]