BioLiP

>protein
REMLQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRY
HMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLI
AGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYV
EFKEEGV

The query sequence (length=247) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	2c39:D	248	247	1.0000	0.9960	1.0000	0.0	4ba1:B, 4ba2:B, 2c37:B, 2c37:F, 2c37:N, 2c37:V, 2c37:X, 2c38:B, 2c38:F, 2c38:H, 2c38:J, 2c38:N, 2c38:V, 2c38:X, 2c39:B, 2c39:F, 2c39:H, 2c39:J, 2c39:L, 2c39:N, 2c39:P, 2c39:R, 2c39:T, 2c39:V, 2c39:X, 2jea:B
2	2pnz:A	236	236	0.5911	0.6186	0.6186	1.67e-107	2po0:A, 2po1:A, 2po2:A
3	3m7n:E	248	242	0.5425	0.5403	0.5537	1.17e-93	3m7n:F, 3m7n:D, 3m85:F, 3m85:D, 3m85:E
4	2wnr:B	222	219	0.4615	0.5135	0.5205	1.97e-83	2wnr:D, 2wnr:F
5	6d6q:B	241	223	0.3482	0.3568	0.3857	5.78e-57	6d6r:B
6	1r6m:A	236	240	0.2955	0.3093	0.3042	1.72e-26
7	6fsz:BB	244	227	0.2874	0.2910	0.3128	1.13e-25	4ifd:B, 5jea:B, 5k36:B, 8qcf:C
8	6d6q:F	252	232	0.3117	0.3056	0.3319	3.39e-21	6d6r:F
9	3dd6:A	244	238	0.2753	0.2787	0.2857	4.13e-21
10	5yjj:A	442	198	0.2713	0.1516	0.3384	1.36e-20	5yjj:B, 5yjj:C, 5yjj:D, 5yjj:E, 5yjj:F
11	5yjj:A	442	170	0.1903	0.1063	0.2765	1.84e-04	5yjj:B, 5yjj:C, 5yjj:D, 5yjj:E, 5yjj:F
12	4aim:A	698	224	0.2874	0.1017	0.3170	2.92e-18	4aid:A, 4aid:B, 4aid:C, 4am3:A, 4am3:C, 4am3:B
13	4aim:A	698	185	0.1862	0.0659	0.2486	1.79e-05	4aid:A, 4aid:B, 4aid:C, 4am3:A, 4am3:C, 4am3:B
14	3gme:A	482	181	0.2308	0.1183	0.3149	3.75e-17
15	7ogk:A	695	184	0.2348	0.0835	0.3152	1.15e-16	3gcm:A, 3gcm:B, 3gcm:C, 3h1c:A, 3h1c:B, 3h1c:C, 3h1c:K, 3h1c:G, 3h1c:I, 3h1c:M, 3h1c:O, 3h1c:R, 3h1c:T, 3h1c:V, 3h1c:X, 7ogk:B, 7ogk:C, 7ogm:L, 7ogm:N, 7ogm:O
16	8wx0:A	597	225	0.2753	0.1139	0.3022	9.26e-16	8wx0:B, 8wx0:C
17	7ld5:A	587	211	0.2672	0.1124	0.3128	5.25e-15	7ld5:B, 7ld5:C
18	1e3p:A	645	207	0.2267	0.0868	0.2705	8.85e-12
19	3m85:I	259	107	0.1377	0.1313	0.3178	3.80e-09	3m7n:I, 3m7n:G, 3m7n:H, 3m85:G, 3m85:H
20	4ba2:A	274	237	0.2186	0.1971	0.2278	1.51e-08	2c37:I, 2c37:U, 2c38:G, 2c38:I, 2c38:U, 2c38:W, 2jea:A
21	2pnz:B	267	95	0.1134	0.1049	0.2947	8.41e-08
22	6d6q:C	265	112	0.1093	0.1019	0.2411	1.59e-06	6d6r:C
23	4a6t:C	455	29	0.0445	0.0242	0.3793	3.0	4a6r:A, 4a6r:B, 4a6t:A, 4a6t:B, 4a6t:D, 4a72:C, 4a72:D, 4ah3:A, 4ah3:B, 4ah3:D, 4ah3:C, 4ba5:A, 4ba5:B, 7q9x:AAA, 7q9x:BBB, 7q9x:CCC, 7q9x:DDD, 7q9z:AAA, 7q9z:BBB, 6s4g:A, 6s4g:B, 6s4g:C, 6s4g:D, 6snu:A, 6snu:B, 6snu:C, 6snu:D
24	8gxf:B	187	45	0.0567	0.0749	0.3111	3.4	8gxf:A, 8gxf:C, 8gxf:D
25	1fi6:A	92	42	0.0486	0.1304	0.2857	4.2
26	3j9y:w	639	155	0.1700	0.0657	0.2710	4.6	5kcs:1w
27	1k68:A	140	89	0.0931	0.1643	0.2584	6.9	1k68:B
28	3el3:A	417	25	0.0486	0.0288	0.4800	8.0	3el3:B
29	3dbg:A	379	25	0.0486	0.0317	0.4800	8.1	3dbg:B
30	6pib:A	245	67	0.0769	0.0776	0.2836	9.8	9eng:A, 6ph9:A, 6pj3:A, 8qk2:A, 8qk5:A, 8qka:A, 7ss6:A, 7ss7:A, 6wii:A

[Back]