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BioLiP
>protein
RDVQPYAGLTPCKTSKAFAKREKTELKALEKRLKKYDPESAPALALQATMEKTKTRFANYGESGLLCGKDGLPHLIVDGN
LEHLGEFAIPGLGFLYVAGWIGYAGRSYIQENKTASKPTEGEIIIDVPKALGLMFQAGAWPLLAGLELKNGTLTAPESEI
TVSPR

The query sequence (length=165) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7yca:F 165 165 1.0000 1.0000 1.0000 3.73e-120
2 8htu:F 161 159 0.6182 0.6335 0.6415 6.72e-70 7ksq:F, 7kux:F, 6l35:F, 7xqp:F
3 7bgi:F 165 163 0.6182 0.6182 0.6258 1.91e-65 7blx:F, 7d0j:F, 7dz7:F, 7dz8:F, 8h2u:F, 6ijj:F, 6ijo:F, 6jo5:F, 6jo6:F, 7r3k:F, 7wyi:F, 7wzn:F, 7zq9:F, 7zqc:F, 7zqd:F, 7zqd:F2
4 5l8r:F 154 151 0.5636 0.6039 0.6159 1.99e-63 7dkz:F, 4rku:F, 4y28:F, 6yac:F, 6yez:F, 6zoo:F, 6zxs:F
5 8cmo:F 165 163 0.5818 0.5818 0.5890 5.06e-63
6 8wm6:F 161 159 0.5697 0.5839 0.5912 6.74e-63 8wmj:F, 8wmv:F, 8wmw:F
7 7a4p:F 165 163 0.5636 0.5636 0.5706 1.97e-61 6zzx:F, 6zzy:F
8 7y7b:F 160 159 0.5455 0.5625 0.5660 3.38e-61 7y8a:F
9 6ly5:f 162 148 0.5515 0.5617 0.6149 5.84e-61 3lw5:F, 2o01:F, 2wsc:F, 2wse:F, 2wsf:F, 4xk8:F, 4xk8:f
10 6qph:F 163 161 0.5758 0.5828 0.5901 1.53e-60 6rhz:F, 6sl5:F, 6yxr:F
11 7wfe:BF 154 151 0.5455 0.5844 0.5960 4.44e-60 8j6z:F, 8j7a:F, 8j7b:F, 7wfd:AF, 7wg5:AF, 7wg5:BF, 8wgh:F
12 7dr0:F 161 159 0.5455 0.5590 0.5660 9.81e-60 7dr1:F, 7dr2:aF, 7dr2:bF, 7dr2:cF, 7dr2:dF
13 5zji:F 158 154 0.5576 0.5823 0.5974 2.28e-59
14 8bcv:F 158 154 0.5394 0.5633 0.5779 1.34e-58 7ew6:F, 7ewk:F, 7f9o:F, 7f9o:j
15 7y5e:FN 158 157 0.5152 0.5380 0.5414 1.86e-58 7y5e:F2, 7y7a:F7, 7y7a:Fo
16 6l4u:F 161 158 0.5030 0.5155 0.5253 1.91e-56
17 6igz:F 163 161 0.5333 0.5399 0.5466 1.44e-55
18 8wey:F 158 157 0.4909 0.5127 0.5159 2.82e-55
19 7blz:F 155 156 0.4970 0.5290 0.5256 2.09e-54 6fos:F, 5zgb:F, 5zgh:F
20 4fe1:F 141 159 0.4424 0.5177 0.4591 5.97e-41 7fix:F1, 7fix:F2, 7fix:F3, 1jb0:F, 6k33:bF, 6k33:aF, 6k33:cF, 7m75:F, 7m76:F, 7m78:F, 3pcq:F, 6pfy:Q, 6pfy:F, 6pfy:d, 6pgk:Q, 6pgk:F, 6pgk:d, 6tra:F, 6trc:F, 6trc:f, 6trc:6, 6trd:F, 6trd:f, 6trd:6, 5zf0:F1, 5zf0:F2, 5zf0:F3, 5zf0:F4, 5zf0:F6, 5zf0:F5
21 6kif:F 136 159 0.4364 0.5294 0.4528 1.74e-40 6kif:R, 6kif:j, 6kig:F, 6kig:R, 6kig:j
22 7qco:F 141 159 0.4424 0.5177 0.4591 6.53e-39 7qco:O, 7qco:o, 7qco:f
23 6vpv:F 141 157 0.4303 0.5035 0.4522 3.04e-35 6vpv:f, 6vpv:6
24 6jeo:bF 141 159 0.4121 0.4823 0.4277 1.68e-33 6jeo:aF, 6jeo:cF, 6jeo:dF, 6k61:F, 6k61:f, 6tcl:F1, 6tcl:F2, 6tcl:F, 6tcl:FF, 7y3f:F
25 6hqb:F 143 160 0.3818 0.4406 0.3937 2.13e-32 8am5:f, 8asl:f, 8asp:f, 4kt0:F, 6nwa:F, 6nwa:f, 6nwa:Q, 5oy0:F, 5oy0:f, 5oy0:6, 7umh:F, 7umh:Q, 7umh:f, 6uzv:F, 6uzv:6, 6uzv:f
26 8jw0:f 185 162 0.4061 0.3622 0.4136 2.95e-31
27 7f4v:aF 151 113 0.3091 0.3377 0.4513 3.00e-27 7f4v:bF, 7f4v:cF
28 8jze:f 184 153 0.3636 0.3261 0.3922 4.11e-27 8jzf:f
29 8jjr:f 169 150 0.3576 0.3491 0.3933 1.89e-26
30 7lx0:Q 135 159 0.3576 0.4370 0.3711 3.21e-22 7lx0:f, 7lx0:F, 6pnj:Q, 6pnj:f, 6pnj:F
31 7s3d:F 124 113 0.3152 0.4194 0.4602 6.72e-21 7s3d:Q, 7s3d:f
32 4l6v:F 125 81 0.2242 0.2960 0.4568 1.26e-18 8am5:j, 8asl:j, 8asp:j, 6hqb:J, 4kt0:J, 4l6v:f, 4l6v:6, 6nwa:J, 6nwa:j, 6nwa:S, 5oy0:J, 5oy0:j, 5oy0:7, 7umh:J, 7umh:S, 7umh:j, 6uzv:J, 6uzv:j, 6uzv:7
33 7dwq:F 103 122 0.2970 0.4757 0.4016 5.32e-17
34 2ywf:A 532 41 0.0848 0.0263 0.3415 1.4 2ywg:A, 2ywh:A
35 3o8l:A 748 79 0.1455 0.0321 0.3038 1.7 3o8l:B, 3o8n:A, 3o8n:B
36 8b37:B 681 64 0.1273 0.0308 0.3281 2.2 8b37:A
37 1js1:X 324 86 0.1152 0.0586 0.2209 2.2 2fg6:X, 2fg6:Z, 2fg6:Y, 2fg6:C, 2fg6:D, 2fg6:E, 2fg7:X, 2fg7:Z, 2fg7:Y, 2fg7:C, 2fg7:D, 2fg7:E, 2g7m:X, 2g7m:Z, 2g7m:Y, 2g7m:C, 2g7m:E, 2g7m:D, 1js1:Y
38 5jy9:B 424 61 0.1030 0.0401 0.2787 4.7 2fn0:A, 2fn0:B, 2fn1:A, 2fn1:B, 5jy9:A
39 8qdx:C 837 47 0.1030 0.0203 0.3617 6.2 9gbv:A, 9gbv:C, 9ggq:C, 9ggq:A, 8qdx:A, 8qqi:A, 8qqi:C, 8qqs:A, 8qqs:C, 8qqu:C, 6rks:C, 6rks:A, 6rku:C, 6rku:A, 6rkv:C, 6rkv:A, 6rkw:C, 6rkw:A, 4tma:E, 2y3p:A, 2y3p:B, 7z9c:A, 7z9c:C, 7z9g:A, 7z9g:C, 7z9k:A, 7z9k:C, 7z9m:A, 7z9m:C
40 1qf6:A 641 72 0.1152 0.0296 0.2639 9.2 7cbg:A, 7cbg:B, 7cbh:A, 7cbh:B, 7cbi:A, 7cbi:B, 1evk:A, 1evk:B, 1evl:A, 1evl:B, 1evl:C, 1evl:D, 1fyf:A, 1fyf:B, 8h98:B, 8h98:A, 8h99:A, 8h99:B, 8h9a:A, 8h9b:A, 8h9c:A, 4hwo:A, 4hwo:B, 4hwp:A, 4hwp:B, 4hwr:A, 4hwr:B, 4hws:A, 4hws:B, 1kog:A, 1kog:B, 1kog:C, 1kog:D, 1kog:E, 1kog:F, 1kog:G, 1kog:H, 6l2p:A, 6l2p:B, 6l2q:A, 6l2q:B, 8ou8:D, 8ou8:A, 4p3o:A, 4p3o:B, 4p3p:A, 4p3p:B, 8qic:A, 8qic:D, 1tke:A, 1tkg:A, 1tky:A, 8wia:A, 8wia:B, 8wig:A, 8wig:B, 8wih:A, 8wih:B, 8wii:A, 8wii:B, 8wij:B, 8wij:A, 7wm7:A, 7wm7:B, 7wmf:A, 7wmf:B, 7wmi:A, 7wmi:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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