BioLiP

>protein
RDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILAS
RGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATR
AAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHID
ALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQH
LLGHKSDTEWDKIEIK

The query sequence (length=336) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5j0n:F	356	347	1.0000	0.9438	0.9683	0.0	5j0n:E, 5j0n:G, 5j0n:H, 1p7d:A, 1p7d:B, 2wcc:3, 1z19:B, 1z19:A, 1z1b:B, 1z1b:A, 1z1g:A, 1z1g:D, 1z1g:B, 1z1g:C
2	7vrs:A	444	114	0.1012	0.0766	0.2982	0.70	7vrs:B
3	4ic5:A	210	94	0.0774	0.1238	0.2766	1.1	4ic5:B, 4ic5:C
4	4xey:B	359	55	0.0506	0.0474	0.3091	1.3	7n9g:C, 4wa9:A
5	6gjc:A	2770	138	0.1250	0.0152	0.3043	2.0	6gjc:B, 6gjc:C, 6gjc:D, 6gjc:E, 6gjc:F
6	3r2q:A	202	70	0.0506	0.0842	0.2429	2.0
7	5fks:A	731	56	0.0595	0.0274	0.3571	2.4
8	6wsb:A	489	62	0.0536	0.0368	0.2903	2.9	6wsb:B
9	6d7j:A	799	77	0.0685	0.0288	0.2987	3.1	6d7j:D
10	3ryb:A	563	140	0.1101	0.0657	0.2643	3.2	3drf:A, 3drg:A, 3drh:A, 3dri:A, 3drj:A, 3drk:A, 3rya:A
11	3uo1:H	216	81	0.0714	0.1111	0.2963	4.9	3uyr:H, 3v4u:H, 3v52:H
12	8p7e:A	309	53	0.0506	0.0550	0.3208	8.0	8p7e:B, 8p8f:A, 8p8f:B
13	8ttc:D	299	75	0.0744	0.0836	0.3333	8.9	8r02:D, 8r0j:C

[Back]