Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
QTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMSITDEQAERLSEKHAQAYER
LQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPID
ECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIAS

The query sequence (length=219) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3s6j:E 220 219 1.0000 0.9955 1.0000 1.77e-161 3s6j:A, 3s6j:B, 3s6j:C, 3s6j:D, 3s6j:F
2 4ex6:A 219 200 0.2694 0.2694 0.2950 5.44e-16 4ex7:A
3 6w04:A 223 191 0.2648 0.2601 0.3037 1.09e-15
4 3qyp:B 228 201 0.2511 0.2412 0.2736 1.19e-14 3qu2:A, 3qu2:B, 3qu2:C, 3qu2:D, 3qu4:A, 3qu4:B, 3qu4:C, 3qu4:D, 3qu4:E, 3qu4:F, 3qu4:G, 3qu4:H, 3qu7:A, 3qu7:B, 3qu9:A, 3quq:A, 3qut:A, 3qx7:A, 3qxg:A, 3qxg:B, 3qyp:A
5 3dv9:A 243 167 0.2283 0.2058 0.2994 5.63e-14
6 2go7:C 205 195 0.2329 0.2488 0.2615 1.18e-09 2go7:A, 2go7:B, 2go7:D
7 2qlt:A 251 166 0.2329 0.2032 0.3072 1.20e-09
8 7ocn:A 690 225 0.2694 0.0855 0.2622 6.95e-09 7ocn:B, 7ocp:A, 7ocp:B, 7ocq:A, 7ocq:B, 7ocr:A, 7ocr:B, 7ocs:A, 7ocs:B, 7ocs:C, 7ocs:D, 7oct:A, 7oct:B, 7ocu:A, 7ocu:B
9 4ygr:A 215 206 0.2466 0.2512 0.2621 8.29e-09 4ygs:A
10 4g9b:A 227 187 0.2329 0.2247 0.2727 7.61e-08
11 5olw:A 224 200 0.2100 0.2054 0.2300 1.94e-07 4c4r:A, 4c4s:A, 4c4t:A, 3fm9:A, 6h8u:A, 6h8v:A, 6h8v:B, 6h8w:A, 6h8x:A, 6h8x:B, 6h8y:A, 6h8z:A, 6h90:A, 6h91:A, 6h91:B, 6h92:A, 6h92:B, 6h93:A, 6h93:B, 6h94:A, 6hdg:A, 6hdh:A, 6hdh:B, 6hdi:A, 6hdi:B, 6hdj:A, 6hdk:A, 6hdl:A, 6hdm:A, 6i03:A, 1lvh:A, 1lvh:B, 1o03:A, 1o08:A, 5o6p:A, 5o6r:A, 5ojz:A, 5ok0:A, 5ok1:A, 5ok2:A, 5olw:B, 5olx:A, 5oly:A, 5oly:G, 8q1c:A, 8q1c:B, 8q1d:A, 8q1e:A, 8q1f:A, 8q1f:B, 6qzg:A, 6qzg:B, 2wf5:A, 2wf6:A, 2wf7:A, 2wf8:A, 2wf9:A, 2wfa:A, 2whe:A, 6ydj:A, 6ydk:A, 6ydl:A, 6ydm:A, 6ydm:B, 1z4n:A, 1z4n:B, 1z4o:A, 1z4o:B, 3zi4:A, 1zol:A
12 2no5:B 226 141 0.1735 0.1681 0.2695 1.10e-05 2no5:A
13 4een:A 229 210 0.2420 0.2314 0.2524 1.50e-04
14 3qnm:A 231 108 0.1416 0.1342 0.2870 2.60e-04
15 4rn3:A 210 189 0.2237 0.2333 0.2593 5.22e-04 4rn3:B
16 1rdf:A 263 63 0.0913 0.0760 0.3175 0.001 1fez:A, 1fez:B, 1fez:C, 1fez:D, 2iof:A, 2iof:K, 2ioh:A, 2ioh:B, 2ioh:C, 2ioh:D, 1rdf:B, 1rdf:C, 1rdf:D, 1rdf:E, 1rdf:F, 1rql:A, 1rql:B, 1rqn:A, 1rqn:B, 1swv:A, 1swv:B, 1sww:A, 1sww:B
17 2x4d:A 270 124 0.1598 0.1296 0.2823 0.020
18 3vay:A 230 183 0.2055 0.1957 0.2459 0.020 3vay:B
19 4uau:A 226 222 0.2283 0.2212 0.2252 0.030 4uas:A, 4uas:B, 4uat:A, 4uat:B, 4uau:B
20 3r09:A 197 178 0.2055 0.2284 0.2528 0.038 2ybd:A
21 8bp1:A 231 115 0.1416 0.1342 0.2696 0.059 4ffd:A, 6q7n:A, 6q7o:A, 6q7p:A, 6q7r:A, 6z1k:A
22 2x4d:B 213 51 0.0776 0.0798 0.3333 0.067
23 2fdr:A 222 192 0.2055 0.2027 0.2344 0.085
24 3i76:B 229 189 0.1872 0.1790 0.2169 0.14 3i76:A, 3i76:C
25 2fi1:A 187 174 0.1872 0.2193 0.2356 0.14
26 1te2:A 218 109 0.1005 0.1009 0.2018 0.16 1te2:B
27 8ywo:A 240 62 0.1005 0.0917 0.3548 0.19
28 1zrm:A 220 182 0.2055 0.2045 0.2473 0.25
29 3umb:A 227 195 0.2100 0.2026 0.2359 0.25
30 4uav:A 246 111 0.1187 0.1057 0.2342 0.45
31 5gvx:A 386 109 0.1416 0.0803 0.2844 0.59
32 4o8c:B 255 127 0.1507 0.1294 0.2598 0.93
33 8suf:C 939 98 0.1370 0.0319 0.3061 1.6
34 2c1z:A 439 80 0.1096 0.0547 0.3000 2.4 2c1x:A, 2c9z:A
35 2yn4:A 225 181 0.1918 0.1867 0.2320 2.5 2yn4:B
36 8wbt:A 237 75 0.0868 0.0802 0.2533 2.7 8wbt:B, 8wbt:C, 8wbt:D
37 4knv:A 241 90 0.1005 0.0913 0.2444 3.5 4knv:B, 4knw:A, 4knw:B, 4knw:C
38 2c4n:A 250 68 0.1050 0.0920 0.3382 3.7
39 4bkm:A 304 61 0.0913 0.0658 0.3279 5.5 4bkm:B, 4bkm:C, 4bkm:D
40 3bw2:A 347 33 0.0594 0.0375 0.3939 6.3 3bw3:A, 3bw4:A
41 5gyn:A 295 67 0.0959 0.0712 0.3134 8.2 5aes:A, 5aes:B, 4bx0:A, 4bx2:A, 4bx2:B, 4bx3:A, 4bx3:B, 2cfr:A, 2cfs:A, 2cft:A, 9em1:A, 2oyc:A, 2p27:A, 2p69:A, 8qfw:A, 8qfw:B, 8s8a:A
42 5zhz:A 252 23 0.0502 0.0437 0.4783 8.5

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218