Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
QTQVKDPLKLCKDVPAYQELKTQRLEAAQKAQADGKPVTFNEAGTKQKFERYDTAYCGQDGYPHLITSGQLDRAGDFLIP
SVLFLWIAGALGWAGRLYLAESKGPEDEIIIDLPKAIKCLLLGLIWPVQAIPELISGKIRVPEDRVTISPR

The query sequence (length=151) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7f4v:aF 151 151 1.0000 1.0000 1.0000 4.19e-109 7f4v:bF, 7f4v:cF
2 4fe1:F 141 145 0.4768 0.5106 0.4966 5.96e-44 7fix:F1, 7fix:F2, 7fix:F3, 1jb0:F, 6k33:bF, 6k33:aF, 6k33:cF, 7m75:F, 7m76:F, 7m78:F, 3pcq:F, 6pfy:Q, 6pfy:F, 6pfy:d, 6pgk:Q, 6pgk:F, 6pgk:d, 6tra:F, 6trc:F, 6trc:f, 6trc:6, 6trd:F, 6trd:f, 6trd:6, 5zf0:F1, 5zf0:F2, 5zf0:F3, 5zf0:F4, 5zf0:F6, 5zf0:F5
3 6kif:F 136 148 0.4503 0.5000 0.4595 7.39e-37 6kif:R, 6kif:j, 6kig:F, 6kig:R, 6kig:j
4 6jeo:bF 141 148 0.4172 0.4468 0.4257 3.45e-36 6jeo:aF, 6jeo:cF, 6jeo:dF, 6k61:F, 6k61:f, 6tcl:F1, 6tcl:F2, 6tcl:F, 6tcl:FF, 7y3f:F
5 6vpv:F 141 148 0.4238 0.4539 0.4324 1.26e-35 6vpv:f, 6vpv:6
6 7qco:F 141 145 0.4040 0.4326 0.4207 1.45e-35 7qco:O, 7qco:o, 7qco:f
7 6hqb:F 143 148 0.4172 0.4406 0.4257 1.36e-34 8am5:f, 8asl:f, 8asp:f, 4kt0:F, 6nwa:F, 6nwa:f, 6nwa:Q, 5oy0:F, 5oy0:f, 5oy0:6, 7umh:F, 7umh:Q, 7umh:f, 6uzv:F, 6uzv:6, 6uzv:f
8 8wey:F 158 160 0.4040 0.3861 0.3812 2.53e-32
9 7dr0:F 161 113 0.3510 0.3292 0.4690 3.24e-32 7dr1:F, 7dr2:aF, 7dr2:bF, 7dr2:cF, 7dr2:dF
10 8wm6:F 161 113 0.3576 0.3354 0.4779 6.63e-32 8wmj:F, 8wmv:F, 8wmw:F
11 7blz:F 155 109 0.3510 0.3419 0.4862 8.67e-32 6fos:F, 5zgb:F, 5zgh:F
12 7y7b:F 160 155 0.4238 0.4000 0.4129 1.29e-30 7y8a:F
13 8htu:F 161 155 0.4371 0.4099 0.4258 4.57e-29 7ksq:F, 7kux:F, 6l35:F, 7xqp:F
14 6l4u:F 161 157 0.3775 0.3540 0.3631 1.01e-28
15 7y5e:FN 158 152 0.3907 0.3734 0.3882 2.05e-28 7y5e:F2, 7y7a:F7, 7y7a:Fo
16 7yca:F 165 113 0.3377 0.3091 0.4513 2.74e-27
17 8jjr:f 169 147 0.3576 0.3195 0.3673 1.40e-25
18 6ly5:f 162 143 0.3642 0.3395 0.3846 8.72e-25 3lw5:F, 2o01:F, 2wsc:F, 2wse:F, 2wsf:F, 4xk8:F, 4xk8:f
19 8bcv:F 158 146 0.3907 0.3734 0.4041 2.42e-24 7ew6:F, 7ewk:F, 7f9o:F, 7f9o:j
20 5l8r:F 154 142 0.3642 0.3571 0.3873 5.70e-24 7dkz:F, 4rku:F, 4y28:F, 6yac:F, 6yez:F, 6zoo:F, 6zxs:F
21 6igz:F 163 156 0.3642 0.3374 0.3526 8.23e-24
22 7bgi:F 165 158 0.4040 0.3697 0.3861 8.46e-24 7blx:F, 7d0j:F, 7dz7:F, 7dz8:F, 8h2u:F, 6ijj:F, 6ijo:F, 6jo5:F, 6jo6:F, 7r3k:F, 7wyi:F, 7wzn:F, 7zq9:F, 7zqc:F, 7zqd:F, 7zqd:F2
23 5zji:F 158 149 0.3974 0.3797 0.4027 1.07e-23
24 7wfe:BF 154 142 0.3642 0.3571 0.3873 1.59e-23 8j6z:F, 8j7a:F, 8j7b:F, 7wfd:AF, 7wg5:AF, 7wg5:BF, 8wgh:F
25 8cmo:F 165 158 0.3775 0.3455 0.3608 2.13e-23
26 8jze:f 184 147 0.3377 0.2772 0.3469 3.66e-23 8jzf:f
27 7a4p:F 165 158 0.3775 0.3455 0.3608 1.36e-21 6zzx:F, 6zzy:F
28 7s3d:F 124 107 0.2980 0.3629 0.4206 1.72e-21 7s3d:Q, 7s3d:f
29 4l6v:F 125 82 0.2781 0.3360 0.5122 6.67e-21 8am5:j, 8asl:j, 8asp:j, 6hqb:J, 4kt0:J, 4l6v:f, 4l6v:6, 6nwa:J, 6nwa:j, 6nwa:S, 5oy0:J, 5oy0:j, 5oy0:7, 7umh:J, 7umh:S, 7umh:j, 6uzv:J, 6uzv:j, 6uzv:7
30 7lx0:Q 135 111 0.2715 0.3037 0.3694 1.30e-20 7lx0:f, 7lx0:F, 6pnj:Q, 6pnj:f, 6pnj:F
31 6qph:F 163 156 0.3311 0.3067 0.3205 3.80e-19 6rhz:F, 6sl5:F, 6yxr:F
32 8jw0:f 185 98 0.2119 0.1730 0.3265 1.19e-16
33 7dwq:F 103 109 0.2715 0.3981 0.3761 3.11e-15
34 7yeh:C 344 57 0.1126 0.0494 0.2982 0.48
35 7qhm:C 233 67 0.1391 0.0901 0.3134 0.49 7q21:C, 7q21:c, 7qhm:P, 7qho:C, 7qho:P
36 5m7t:A 451 57 0.1126 0.0377 0.2982 0.52 5m7s:A, 5m7s:B, 5m7t:B, 5m7u:A, 5m7u:B, 7ou6:AAA, 7ou6:BBB, 6pm9:A, 6pm9:B, 6pm9:C, 6pm9:D, 5uhl:A, 5uhl:C, 5uho:A, 5uho:C
37 5vvx:C 431 57 0.1126 0.0394 0.2982 0.65 5un8:A, 5un8:C, 5un8:B, 5un8:D, 5un9:A, 5un9:B, 5vvt:A, 5vvt:C, 5vvu:A, 5vvu:C, 5vvv:A, 5vvv:C
38 7r3a:A 411 84 0.1656 0.0608 0.2976 0.85 7r3a:B, 7r3a:C, 7r3a:D, 7r3a:E, 7r3a:F, 7r3a:G, 7r3a:H
39 7pub:Cr 267 40 0.0861 0.0487 0.3250 4.0 6hiv:Cr, 6hiw:Cr, 6hiy:Cr
40 2ddx:A 324 41 0.1060 0.0494 0.3902 4.3 3vpl:A
41 6bza:C 501 35 0.0861 0.0259 0.3714 4.8 6bza:A, 6bza:B, 6bzn:D, 6bzq:A, 6bzq:B, 6bzq:C, 6bzq:D, 6bzt:A, 6bzt:B, 6bzt:C, 6bzt:D, 6bzz:A, 6bzz:B, 6bzz:C, 6bzz:D
42 7msw:A 635 26 0.0861 0.0205 0.5000 8.6 7exm:A, 7exm:B, 7exm:C, 7exm:D, 7msx:A

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218