BioLiP

>protein
QSTVDTRQMPIQRVGVRAVRHPLTVRTAEGETQATVGTWNLDVHLPADQKGTHMSRFVALLEERGGPLTADAFRTMLATM
LEKLEARAGRIEVSFPYFVNKTAPVSGVRSLLDYEVTLTGDVRDGLTRVFAKVLVPVTSLCPCSKKISQYGAHNQRSHVT
IDAELAADVPVEDLIRIAEEEASCELWGLLKRPDEKFVTERAYENPKFVEDLVRDVARRLDADERIVAYVLEAENFESIH
NHSAYALIERDKRR

The query sequence (length=254) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8g8v:A	254	254	1.0000	1.0000	1.0000	0.0	8g6c:A, 8g6c:B, 8g8v:B, 8tcc:A, 8tcc:B, 8tcc:C, 8tcc:D
2	5k95:A	245	242	0.5827	0.6041	0.6116	1.38e-109	3d2o:A, 3d2o:B, 5k95:B, 5k9g:A, 5k9g:B
3	4htg:A	302	36	0.0512	0.0430	0.3611	1.3
4	7k4o:A	554	73	0.0748	0.0343	0.2603	2.4
5	4kws:A	397	77	0.0906	0.0579	0.2987	4.0	4k2s:A, 4k2s:B, 4k2s:C, 4k2s:D, 4k2s:E, 4k2s:F, 4k2s:G, 4k2s:H, 4kpl:A, 4kpl:B, 4kpl:C, 4kpl:D, 4kpl:E, 4kpl:F, 4kpl:G, 4kpl:H, 4kt2:A, 4kt2:B, 4kt2:C, 4kt2:D, 4kt2:E, 4kt2:F, 4kt2:G, 4kt2:H, 4kws:B, 4kws:C, 4kws:D, 4kws:E, 4kws:F, 4kws:G, 4kws:H, 3ow1:A, 3ow1:B, 3ow1:C, 3ow1:D, 3ow1:E, 3ow1:F, 3ow1:G, 3ow1:H, 3p93:A, 3p93:B, 3p93:C, 3p93:D, 3p93:E, 3p93:F, 3p93:G, 3p93:H, 3pk7:A, 3pk7:B, 3pk7:C, 3pk7:D, 3pk7:E, 3pk7:F, 3pk7:G, 3pk7:H, 3qke:A, 3qke:B, 3qke:C, 3qke:D, 3qke:E, 3qke:F, 3qke:G, 3qke:H, 3rgt:A, 3rgt:B, 3rgt:C, 3rgt:D
6	7p7k:C	568	53	0.0748	0.0335	0.3585	5.5	7p7e:C
7	7p63:C	589	53	0.0748	0.0323	0.3585	5.6	7nyr:D, 7nyu:D, 7nz1:D, 7p64:C, 7p69:C, 7p7c:C, 7p7j:C, 7p7l:C, 7p7m:C, 7z7r:C, 7z7s:C, 7z7t:C, 7z7v:C, 7z80:C, 7z83:C, 7z84:C, 7zc5:C, 7zci:C
8	5vog:A	176	36	0.0551	0.0795	0.3889	6.6
9	4uop:B	409	54	0.0630	0.0391	0.2963	7.0	4uop:A
10	7kho:D	405	33	0.0591	0.0370	0.4545	7.7
11	6c71:B	440	33	0.0591	0.0341	0.4545	7.7	7c49:A, 7c49:B, 7c4a:A, 7c4a:B, 6c71:A, 6c71:C, 6c71:D, 8dq7:A, 8dq7:B, 8dq8:A, 8dq8:B, 8dsv:A, 8dsv:B, 7khn:A, 7kho:A, 7kho:B, 7kho:C, 5ttj:A, 5ttj:B, 5ttk:A, 5ttk:B, 5ttk:C, 5ttk:D
12	7o5l:A	417	46	0.0709	0.0432	0.3913	8.1	7o5l:C, 7o5m:A, 7o5m:C, 7zd7:A, 7zd7:C, 7zd8:A, 7zd8:C, 7zd9:A, 7zd9:C
13	3esx:B	169	48	0.0630	0.0947	0.3333	8.9	3esx:A, 3esy:A, 3esy:B, 3esy:C, 3esy:D, 3esz:A, 3esz:B, 1flv:A, 5ljp:A, 1obo:A, 1obo:B, 1obv:A, 1rcf:A, 2v5u:A, 2v5u:B, 2v5v:A, 2v5v:B

[Back]