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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
QSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQGTQLTPEEKLLRAIF

The query sequence (length=77) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6ido:A 86 85 1.0000 0.8953 0.9059 1.17e-45 6ido:B
2 6omf:F 278 69 0.8312 0.2302 0.9275 9.82e-36 5ipl:F, 5ipm:F, 5ipn:F, 6kj6:F, 6utv:FFF, 6utw:FFF, 6utx:FFF, 6uty:FFF, 6utz:FFF, 6uu0:FFF, 6uu1:FFF, 6uu2:FFF, 6uu3:FFF, 6uu4:FFF, 6uu5:FFF, 6uu6:FFF, 6uu7:FFF, 6uu8:FFF, 6uu9:FFF, 6uua:FFF, 6uub:FFF, 6uuc:FFF
3 7f0r:F 278 69 0.5974 0.1655 0.6667 4.51e-24
4 8cwr:B 109 88 0.4545 0.3211 0.3977 9.64e-10 8cwt:B, 8cwt:D, 8cwt:F, 8cyf:B, 7kuf:B
5 7l7b:F 272 60 0.3636 0.1029 0.4667 1.80e-09
6 3iyd:F 479 50 0.2987 0.0480 0.4600 8.14e-08
7 6n4c:F 558 50 0.2987 0.0412 0.4600 1.17e-07 8ad1:F, 6b6h:F, 7bef:F, 7beg:F, 7c17:F, 7c97:F, 6ca0:F, 7chw:F, 7dy6:F, 8ftd:L, 6jnx:F, 8jo2:F, 6k4y:F, 7khb:F, 7khc:F, 7khe:F, 7khi:F, 6ldi:F, 7mkd:L, 7mke:L, 7mki:L, 7mkj:L, 7n4e:F, 6n57:L, 6n62:F, 6oul:L, 6p18:F, 2p7v:B, 6pb4:F, 6pb5:F, 6pb6:F, 6psq:L, 6pss:L, 6pst:L, 6psu:L, 6psv:L, 6psw:L, 7szj:F, 8to1:L, 8to6:L, 8to8:L, 8toe:L, 8tom:L, 5vt0:L, 7vwy:F, 7vwz:F, 7w5w:F, 7w5x:F, 7w5y:F, 6wmu:F, 6xh7:F, 6xh8:F, 6xl5:F, 6xl9:F, 6xlj:F, 6xll:F, 8y6u:F, 4yln:F, 4yln:L, 4yln:R, 4ylo:F, 4ylo:L, 4ylo:R, 4ylp:F, 4ylp:L, 4ylp:R
8 6psr:L 548 50 0.2987 0.0420 0.4600 1.18e-07 6n58:L, 6n61:F
9 4kn7:X 517 50 0.2987 0.0445 0.4600 1.20e-07
10 6n60:F 318 50 0.2987 0.0723 0.4600 1.25e-07 8igr:L, 8igs:L
11 8u3b:F 431 50 0.2987 0.0534 0.4600 1.51e-07
12 8h3v:G 314 59 0.3117 0.0764 0.4068 2.30e-07 8h40:G
13 7ckq:F 272 50 0.3117 0.0882 0.4800 3.62e-07 7f75:F, 8x6f:E
14 6wmr:Z 470 58 0.3247 0.0532 0.4310 3.86e-07 6wmt:Z
15 7ubm:F 353 48 0.2857 0.0623 0.4583 5.16e-07 7ubn:F
16 8gzg:F 314 50 0.2857 0.0701 0.4400 6.13e-07 8gzh:F
17 7ye1:F 497 59 0.2857 0.0443 0.3729 1.72e-06 7ye2:F, 5yix:A
18 8k60:F 315 53 0.2597 0.0635 0.3774 3.99e-06 8dy7:F, 8dy9:F, 8hvr:F, 8jke:F, 7vpd:F, 7vpz:F, 7x74:F, 7x75:F, 7x76:F
19 7rdq:F 349 54 0.3117 0.0688 0.4444 1.01e-05 2a68:F, 2a68:P, 2a69:F, 2a69:P, 6cuu:F, 5d4c:F, 5d4c:P, 5d4d:F, 5d4d:P, 5d4e:F, 5d4e:P, 5e17:F, 5e18:F, 7eh0:F, 7eh1:F, 7eh2:F, 7eh2:P, 4g7h:F, 4g7h:P, 4g7o:F, 4g7o:P, 4g7z:F, 4g7z:P, 5i2d:F, 5i2d:Q, 1iw7:F, 1iw7:P, 4ki2:A, 4ki2:B, 6kqd:F, 6kqd:P, 6kqe:F, 6kqf:F, 6kqg:F, 6kqh:F, 6kql:F, 6kqm:F, 6kqn:F, 1ku7:A, 6l74:F, 6lts:F, 7mlb:F, 7mli:F, 7mlj:F, 3n97:A, 4oin:F, 4oio:F, 4oip:F, 4oiq:F, 4oir:F, 6ovr:F, 6ovy:F, 6ow3:F, 6oy5:F, 6oy6:F, 6oy7:F, 6p70:F, 6p71:F, 4q4z:F, 4q5s:F, 1rio:H, 1smy:F, 5tjg:F, 3ugo:A, 3ugp:A, 5vo8:F, 5voi:F, 8w8n:F, 8w8o:F, 8w8p:F, 6wox:F, 6woy:F, 5x21:F, 5x22:F, 5x22:P, 4xln:F, 4xln:L, 4xlp:F, 4xlp:L, 4xlq:F, 4xlq:L, 4xlr:F, 4xlr:L, 4xls:F, 4xls:L
20 6bzo:F 326 59 0.2987 0.0706 0.3898 8.15e-05 6c04:F, 6cce:F, 6ccv:F, 6dcf:F, 6edt:F, 6ee8:F, 6eec:F, 6fbv:F, 8hih:F, 7kif:F, 7kim:F, 7kin:F, 6m7j:F, 6ono:B, 6ono:D, 6onu:B, 6onu:D, 6onu:F, 6onu:H, 7p5x:AF, 5tw1:F, 7u22:F, 5uh5:F, 5uh6:F, 5uh8:F, 5uh9:F, 5uha:F, 5uhb:F, 5uhc:F, 5uhd:F, 5uhe:F, 5uhf:F, 5uhg:F, 5vi5:F, 5vi8:F, 6vvs:F, 6vvt:F, 6vvv:F, 6vvx:F, 6vvy:F, 6vvz:F, 6vw0:F
21 7lq4:A 192 52 0.2597 0.1042 0.3846 0.021
22 7f0r:C 1324 14 0.1818 0.0106 1.0000 0.025
23 3iyd:C 1089 14 0.1818 0.0129 1.0000 0.025
24 4s20:C 1179 14 0.1818 0.0119 1.0000 0.026 4s20:H
25 8pil:I 1342 14 0.1818 0.0104 1.0000 0.026 8ac0:C, 7adb:X, 7adc:X, 7add:X, 7ade:X, 6b6h:C, 7bef:C, 7beg:C, 6byu:C, 7c17:C, 6c6s:I, 7c97:C, 6ca0:C, 7chw:C, 6cux:C, 7d7d:C, 7dy6:C, 8e3f:A, 8e5k:A, 8e5o:A, 8e6x:A, 8e6z:A, 8eg8:I, 8egb:I, 6flq:C, 8ftd:I, 6gfw:C, 6gh5:C, 6gov:X, 5ipl:C, 5ipm:C, 5ipn:C, 6jnx:C, 8jo2:C, 6k4y:C, 8k58:C, 8k5a:C, 7khb:C, 7khc:C, 7khe:C, 7khi:C, 6kj6:C, 4kmu:C, 4kmu:H, 4kn4:C, 4kn4:H, 4kn7:C, 4kn7:H, 6ldi:C, 7m8e:C, 4mex:C, 4mex:I, 7mkd:I, 7mke:I, 7mki:I, 7mkj:I, 7mkn:C, 6n4c:C, 7n4e:C, 6n57:I, 6n58:I, 6n60:C, 6omf:C, 6oul:I, 6p18:C, 6p19:C, 6pb4:C, 6pb5:C, 6pb6:C, 8pdy:I, 8ph9:I, 6pmi:C, 6pmj:C, 6psq:I, 6psr:I, 6pst:I, 6psu:I, 6psv:I, 6psw:I, 7py0:C, 7py1:C, 7py3:C, 7py5:C, 7py6:C, 7py7:C, 7py8:C, 7pyj:C, 7pyk:C, 7q0j:C, 7q0k:C, 8re4:C, 8rea:C, 8reb:C, 8rec:C, 8red:C, 8ree:C, 7szj:C, 7szk:C, 8to1:I, 8to6:I, 8to8:I, 8toe:I, 8tom:I, 6tqn:X, 6tqo:X, 8u3b:C, 5uac:C, 5uah:C, 5ual:C, 7ubm:C, 7ubn:C, 6utv:CCC, 6utw:CCC, 6utx:CCC, 6uty:CCC, 6utz:CCC, 6uu0:CCC, 6uu1:CCC, 6uu2:CCC, 6uu3:CCC, 6uu4:CCC, 6uu5:CCC, 6uu6:CCC, 6uu7:CCC, 6uu8:CCC, 6uu9:CCC, 6uua:CCC, 6uub:CCC, 6uuc:CCC, 6vjs:C, 5vt0:I, 6vu3:AA, 7vwy:C, 7vwz:C, 6vyq:AA, 6vyr:AA, 6vys:AA, 6vyt:AA, 6vyu:AA, 6vyw:AA, 6vz2:AA, 6vz5:AA, 6vz7:AA, 6vzj:AA, 7w5w:C, 7w5x:C, 7w5y:C, 6wmu:C, 6x6t:AA, 6x7f:AA, 6x7k:AA, 6x9q:AA, 6xas:I, 6xdq:AA, 6xdr:AA, 6xgf:AA, 6xh7:C, 6xh8:C, 6xij:AA, 6xl5:C, 6xl9:C, 6xlj:C, 6xll:C, 6xlm:C, 6xln:C, 4xsx:C, 4xsx:I, 4xsy:C, 4xsy:I, 4xsz:C, 4xsz:I, 7xue:I, 7xui:I, 8y6u:C, 4yfn:I, 4yfx:C, 4yln:C, 4yln:I, 4yln:O, 4ylo:C, 4ylo:I, 4ylo:O, 4ylp:C, 4ylp:I, 4ylp:O, 6z9p:X, 6z9q:X, 6z9r:X, 6z9s:X, 6z9t:X, 4zh2:C, 4zh2:I, 4zh3:C, 4zh3:I, 4zh4:C, 4zh4:I
26 5ms0:C 1291 14 0.1818 0.0108 1.0000 0.027
27 3fux:C 265 51 0.2468 0.0717 0.3725 0.066 3fuu:A, 3fuw:A, 3fux:A, 3fux:B
28 6pfv:G 223 35 0.1818 0.0628 0.4000 0.096 6pfj:A, 6pfv:A, 6pfv:D
29 8i23:C 1164 59 0.2857 0.0189 0.3729 0.15 8i24:C
30 6wmp:C 1196 13 0.1558 0.0100 0.9231 0.26 6wmr:C, 6wmt:C
31 6vvt:C 883 14 0.1558 0.0136 0.8571 0.28
32 6jcy:C 1139 14 0.1558 0.0105 0.8571 0.30 6bzo:C, 6c04:C, 6c06:C, 6dv9:C, 6dvb:C, 6dvc:C, 6dvd:C, 6dve:C, 8e74:C, 8e79:C, 8e82:C, 8e8m:C, 8e95:C, 6edt:C, 6ee8:C, 6eec:C, 8ehq:C, 8ej3:C, 8eoe:C, 8eof:C, 8eos:C, 8eot:C, 8exy:C, 6fbv:C, 8hih:C, 6jcx:C, 7kif:C, 7kin:C, 6koo:C, 6kop:C, 6koq:C, 6m7j:C, 7p5x:AC, 7rwi:C, 6tye:C, 6tyf:C, 6tyg:C, 7u22:C, 5uh5:C, 5uh6:C, 5uh8:C, 5uh9:C, 5uha:C, 5uhb:C, 5uhc:C, 5uhd:C, 5uhe:C, 5uhf:C, 5uhg:C, 5vi5:C, 6vvx:C, 6vvy:C, 6vvz:C, 6vw0:C, 5zx2:C
33 6ccv:C 1099 14 0.1558 0.0109 0.8571 0.30 6cce:C, 6kon:C, 5tw1:C, 6vvs:C
34 8dy7:C 1118 14 0.1558 0.0107 0.8571 0.31 8dy9:C, 8hvr:C, 8jke:C, 8k60:C, 7vpd:C, 7vpz:C, 7x74:C, 7x75:C, 7x76:C
35 7ye1:C 1312 14 0.1429 0.0084 0.7857 0.67 7ye2:C
36 8hkc:E 262 34 0.1299 0.0382 0.2941 0.83
37 6wp9:E 218 25 0.1558 0.0550 0.4800 1.2 6wp9:A, 6wp9:B, 6wp9:C, 6wp9:D, 6wp9:F, 6wp9:G, 6wp9:H, 6wpa:A, 6wpa:B
38 8ity:V 361 50 0.2338 0.0499 0.3600 1.9 8iue:V, 8iuh:V, 5n9g:A, 5n9g:F, 4roc:A, 4rod:A, 4roe:A
39 6j9e:C 1288 11 0.1429 0.0085 1.0000 2.1
40 3idv:A 235 65 0.2338 0.0766 0.2769 2.8
41 1tz3:A 299 21 0.1429 0.0368 0.5238 3.3 1tz6:A, 1tz6:B
42 7l7b:C 1166 14 0.1429 0.0094 0.7857 3.5
43 8h3v:A 1077 59 0.2727 0.0195 0.3559 4.6 8h40:A
44 7u5d:A 630 22 0.1429 0.0175 0.5000 4.8
45 2v0n:A 459 38 0.1688 0.0283 0.3421 5.3 2v0n:B, 1w25:A, 1w25:B, 2wb4:A, 2wb4:B
46 6zxf:y 233 32 0.1558 0.0515 0.3750 6.1
47 6dcf:C 858 13 0.1299 0.0117 0.7692 6.4
48 6g18:y 325 32 0.1558 0.0369 0.3750 6.7 6g4s:y, 6g51:y, 6g53:y, 6g5i:y, 7wtw:y, 7wtx:y, 7wtz:y, 7wu0:y, 6zuo:y, 6zxd:y, 6zxe:y
49 8urw:C 1080 59 0.2727 0.0194 0.3559 7.5 8syi:C
50 4wj3:B 456 43 0.1948 0.0329 0.3488 8.1 4wj3:K, 4wj3:H, 4wj3:E
51 6n9m:A 331 15 0.1169 0.0272 0.6000 8.5
52 8svd:T 197 64 0.1818 0.0711 0.2188 8.5 8sua:A, 8svd:A, 8svd:G, 8svd:F, 8svd:E, 8svd:I, 8svd:J, 8svd:K
53 5kf0:A 480 18 0.1429 0.0229 0.6111 8.7 5jry:A, 5kf0:B, 5kf0:C, 5kf0:D
54 7pu7:A 1070 54 0.1688 0.0121 0.2407 9.4 5lew:A
55 8sva:A 200 55 0.1688 0.0650 0.2364 9.4 8suk:D, 8suk:C, 8sva:F, 8sva:G, 8sva:T, 8t5y:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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