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BioLiP
>protein
QRGLAHLVVSNFRAEHLAGDADTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADAGAD
DDLLGSCDRSPHSGFHEVTCELNHGRVKFSYHAKCLPHLTGGTCLE

The query sequence (length=126) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3nsj:A 530 126 0.9603 0.2283 0.9603 1.20e-84 7pag:A, 5ug7:A, 4y1s:A, 4y1t:A
2 3w57:A 111 100 0.3095 0.3514 0.3900 6.61e-11 3w57:B
3 5a52:A 154 76 0.1746 0.1429 0.2895 8.61e-06
4 6nyt:A 135 59 0.1508 0.1407 0.3220 8.42e-04
5 5ue8:A 847 62 0.1587 0.0236 0.3226 0.001 5ue8:B, 1y8f:A
6 4ihb:E 126 76 0.1825 0.1825 0.3026 0.002 7jof:A, 7jof:B, 7jof:C, 7jof:D
7 2cm6:A 149 86 0.1905 0.1611 0.2791 0.004 2cm5:A, 2cm6:B, 5lo8:A, 5lo8:B, 5lob:A, 5lob:B, 5lob:C, 5low:A, 5low:B, 5low:C, 5low:H, 5low:I, 5low:J
8 5a50:A 165 85 0.1746 0.1333 0.2588 0.008 5a4x:A, 5a4x:B, 5a50:B, 5a51:A, 5a51:B, 4v29:A, 4v29:B
9 4ldc:A 149 89 0.2063 0.1745 0.2921 0.013
10 6x1o:C 624 42 0.1270 0.0256 0.3810 0.046 6x1o:A, 6x6u:A, 6x6u:C
11 6uwa:A 187 94 0.1587 0.1070 0.2128 0.052 1dsy:A, 3gpe:A, 2nce:A, 3twy:A, 5w4s:A
12 4p42:A 455 71 0.1667 0.0462 0.2958 0.070 4npk:A
13 1djg:B 561 48 0.1349 0.0303 0.3542 0.18 1djg:A, 1djh:A, 1djh:B, 1dji:A, 1dji:B, 1djw:A, 1djw:B, 1djx:A, 1djx:B, 1djy:A, 1djy:B, 1djz:A, 1djz:B
14 3pfq:A 523 48 0.1032 0.0249 0.2708 0.27 1a25:A, 1a25:B, 2i0e:A, 2i0e:B
15 5yq0:C 304 32 0.0952 0.0395 0.3750 0.69 5yq0:G
16 4lt7:A 128 89 0.1587 0.1562 0.2247 0.84 2k3h:A, 4np9:A, 4ns0:A
17 7d4c:A 595 60 0.1429 0.0303 0.3000 1.0 7c3h:A, 7c3h:B, 7c3i:A, 7c3i:B, 7c3j:A, 7c3j:B, 7c3l:A, 7c3l:B, 7d4d:A, 7d4e:A, 3x0v:A, 3x0v:B
18 4p42:B 431 53 0.1349 0.0394 0.3208 1.3
19 1xdi:A 459 20 0.0794 0.0218 0.5000 1.3 1xdi:B
20 5z1b:A 627 34 0.1111 0.0223 0.4118 2.8 6ld0:A, 6ld0:B, 6ld0:C, 6ld0:D, 6ldb:A, 6ldb:B, 6ldb:C, 6ldb:D, 6ldc:A, 6ldc:B, 6ldc:C, 6ldc:D, 6ldd:A, 6ldd:B, 6ldd:C, 6ldd:D, 5z1b:B, 5z1b:C, 5z1b:D
21 4yd9:A 1656 20 0.0794 0.0060 0.5000 2.9 4yd9:D, 4yd9:G, 4yd9:J, 4yd9:M, 4yd9:P, 4yd9:S, 4yd9:V, 4yd9:Y, 4yd9:b
22 8c0t:A 281 51 0.0952 0.0427 0.2353 6.8
23 8e8v:B 406 58 0.1349 0.0419 0.2931 7.6 8e8v:A
24 5aa5:G 561 26 0.0794 0.0178 0.3846 8.0 5aa5:C, 5aa5:E, 5aa5:K, 5aa5:I, 5aa5:L
25 1d5c:A 162 56 0.1429 0.1111 0.3214 8.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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