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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
QLSPVKNSRVELQKIYDRHQSRLFINELVLENFKSYAGKQVVGPFHTSFSAVVGPNGSGKSNVIDSMLFVFGFRANKMRQ
DRLSDLIHKSEAFPSLQSCSVAVHFQYVIDESSGTSRIDEEKPGLIITRKAFKNNSSKYYINEKESSYTEVTKLLKNEGI
DLDHKRFLILQGEVENIAQMKPKAEKESDDGLLEYLEDIIGTANYKPLIEERMGQIENLVQKRDEVKEQLGILKKKRFDE
FMAGFNIISMTLKEMYQMITMGGNAELELVDSLDPFSEGVTFSVMPPKKSWRNITNLSGGEKTLSSLALVFALHKYKPTP
LYVMDEIDAALDFRNVSIVANYIKERTKNAQFIVISLRNNMFELAQQLVGVYKRDNRTKSTTIKNIDI

The query sequence (length=388) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7q2x:B 388 388 1.0000 1.0000 1.0000 0.0 7q2y:B
2 7qen:B 419 401 0.9485 0.8783 0.9177 0.0
3 6yuf:A 384 400 0.3479 0.3516 0.3375 1.27e-65
4 6zz6:A 360 368 0.3608 0.3889 0.3804 3.37e-65
5 8roa:A 339 370 0.3376 0.3864 0.3541 4.91e-65
6 8roa:C 364 357 0.3376 0.3599 0.3669 3.45e-63 8p0a:A, 8pq5:A, 8rob:A, 8roe:A, 8rof:A, 8rog:A
7 1w1w:B 327 357 0.3479 0.4128 0.3782 1.36e-61 1w1w:C, 1w1w:D
8 7w1m:A 399 390 0.3531 0.3434 0.3513 1.43e-61 6wge:A
9 5h68:B 332 352 0.2732 0.3193 0.3011 8.86e-40 5h68:A
10 1w1w:A 274 357 0.2938 0.4161 0.3193 7.62e-39
11 8rok:A 381 382 0.2577 0.2625 0.2618 2.04e-38 8pq5:B
12 8rol:A 411 401 0.2758 0.2603 0.2668 3.18e-38 8roi:A, 8roj:A, 8rok:C
13 6qpw:E 198 188 0.1778 0.3485 0.3670 1.83e-37
14 3kta:B 171 149 0.1675 0.3801 0.4362 5.53e-35
15 6wg3:A 561 143 0.1649 0.1141 0.4476 4.89e-34 6wg6:A, 6wg6:C
16 6wg3:A 561 160 0.1469 0.1016 0.3563 1.65e-21 6wg6:A, 6wg6:C
17 6qpw:C 377 376 0.2294 0.2361 0.2367 2.75e-33
18 8p0a:B 314 353 0.2371 0.2930 0.2606 1.22e-32
19 5xg3:B 374 386 0.2912 0.3021 0.2927 6.18e-32 5h67:A, 5xg3:A
20 1xex:A 166 161 0.1546 0.3614 0.3727 2.89e-25 3kta:A, 3kta:C
21 6zz6:B 423 407 0.2423 0.2222 0.2310 2.66e-24
22 7q2x:A 431 201 0.1495 0.1346 0.2886 1.36e-20 7q2y:A
23 7q2x:A 431 79 0.0851 0.0766 0.4177 8.69e-16 7q2y:A
24 7qen:A 465 201 0.1495 0.1247 0.2886 2.06e-20
25 7qen:A 465 79 0.0825 0.0688 0.4051 2.83e-15
26 7w1m:B 528 169 0.1392 0.1023 0.3195 3.53e-19
27 7w1m:B 528 214 0.1340 0.0985 0.2430 1.17e-14
28 6wge:B 490 169 0.1366 0.1082 0.3136 9.53e-19
29 6wge:B 490 214 0.1340 0.1061 0.2430 9.09e-15
30 6wg3:B 693 169 0.1366 0.0765 0.3136 1.50e-18
31 6wg3:B 693 214 0.1340 0.0750 0.2430 8.69e-15
32 6yuf:C 456 159 0.1134 0.0965 0.2767 3.75e-16
33 6yuf:C 456 207 0.1366 0.1162 0.2560 1.28e-12
34 4ux3:A 436 200 0.1443 0.1284 0.2800 3.96e-16
35 4ux3:A 436 213 0.1160 0.1032 0.2113 1.36e-11
36 6qpw:A 183 158 0.1263 0.2678 0.3101 1.05e-14
37 3auy:A 366 390 0.2371 0.2514 0.2359 4.60e-07 3aux:A, 3auy:B, 3av0:B, 5dny:D, 5dny:B, 5f3w:D, 5f3w:B
38 7tve:D 445 68 0.0593 0.0517 0.3382 0.003
39 7tve:D 445 65 0.0490 0.0427 0.2923 0.48
40 7tve:E 461 62 0.0490 0.0412 0.3065 0.006
41 7tve:E 461 139 0.0954 0.0803 0.2662 0.014
42 3qf7:A 357 361 0.2088 0.2269 0.2244 0.007 3qf7:B, 3tho:A, 4w9m:C, 4w9m:I, 4w9m:E, 4w9m:K
43 8ee7:A 456 81 0.0747 0.0636 0.3580 0.011 8ee4:A, 8ee4:B, 8ee4:C, 8ee4:D, 8ee4:E, 8ee4:F, 8ee7:B, 8eea:A, 8eea:B, 8eea:C, 8eea:D, 8eea:E, 8eea:F, 8sux:A, 8sux:B, 8sux:C, 8sux:D, 8sux:E, 8sux:F
44 7nhk:0 495 77 0.0670 0.0525 0.3377 0.021
45 4ayx:A 571 98 0.0696 0.0473 0.2755 0.050 4ayt:A, 4ayw:A, 7y48:B, 3zdq:A
46 3qku:A 359 371 0.2165 0.2340 0.2264 0.072 1f2u:A, 1f2u:D, 1f2u:C, 1f2u:B, 3qks:A, 3qks:B
47 6s85:D 375 316 0.1856 0.1920 0.2278 0.14 6s6v:C, 6s6v:D, 6s85:C, 7yzo:C, 7yzo:D, 7z03:D, 7z03:C
48 3qkt:B 319 62 0.0412 0.0502 0.2581 0.16 4ncj:A, 4ncj:B, 3qkt:D, 3qku:B
49 3qkt:A 339 62 0.0412 0.0472 0.2581 0.19 4ncj:C, 4ncj:D, 3qkt:C
50 5eg1:B 576 70 0.0619 0.0417 0.3429 0.19 5eg1:A, 5ofr:A, 5ofr:B, 4pl0:A, 4pl0:B, 8px9:A, 8px9:B
51 7yzp:C 448 213 0.1340 0.1161 0.2441 0.21 7yzp:D
52 4f4c:A 1250 85 0.0670 0.0208 0.3059 0.28
53 5n9x:A 489 46 0.0335 0.0266 0.2826 0.33 5n9x:B
54 8q72:A 750 29 0.0258 0.0133 0.3448 0.36 8q72:B, 8q72:F, 8q72:G
55 8as8:A 597 49 0.0335 0.0218 0.2653 0.54 8as8:B, 8bfn:A, 8bfn:B, 8bfn:F, 8bfn:G
56 7z15:K 224 83 0.0593 0.1027 0.2771 0.65 7z15:L
57 7ph3:A 577 75 0.0593 0.0399 0.3067 0.69 3b5y:A, 3b5y:C, 3b60:A, 3b60:B, 3b60:C, 3b60:D, 7bcw:A, 7bcw:B, 6bpl:A, 6bpl:B, 6bpp:A, 6bpp:B, 8dmm:A, 8dmm:B, 7mew:A, 7mew:B, 7ph2:A, 7ph2:B, 7ph3:B, 7ph4:A, 7ph4:B, 7ph7:A, 7ph7:B, 7sel:A, 7sel:B, 8tso:A, 8tso:B
58 2hyd:A 578 73 0.0515 0.0346 0.2740 0.83 2hyd:B, 2onj:A, 2onj:B
59 8dk2:C 723 24 0.0258 0.0138 0.4167 0.87 8dk2:D
60 6tej:B 585 64 0.0490 0.0325 0.2969 0.90
61 7zr1:D 780 43 0.0387 0.0192 0.3488 1.2 7zr1:C
62 7o80:Bz 595 66 0.0541 0.0353 0.3182 1.4 7a09:J, 6hcf:k1, 6hcm:k1, 3jag:jj, 3jah:jj, 3jai:jj, 5lzv:jj, 8p03:k, 8p09:k, 8scb:jj, 6yal:k, 6yam:k, 6zme:CI, 6zvj:1
63 8dk3:A 455 21 0.0258 0.0220 0.4762 1.6 8dk3:B
64 7zoa:B 570 64 0.0541 0.0368 0.3281 1.8 7znu:A, 7znu:B, 7zo9:A, 7zo9:B, 7zoa:A
65 6tmf:d 582 69 0.0541 0.0361 0.3043 2.0 3ozx:A, 3ozx:B
66 5da9:A 433 43 0.0387 0.0346 0.3488 2.1 5dac:A, 5dac:B
67 8jxu:A 1410 18 0.0309 0.0085 0.6667 2.2 8jxq:A
68 8wiv:O 657 97 0.0696 0.0411 0.2784 2.3 8wiv:M, 8wiv:L, 8wj3:M, 8wj3:O, 8wj3:L, 8wk0:M, 8wk0:O, 8wk0:L
69 8wiv:D 602 97 0.0696 0.0449 0.2784 2.3 8wk0:D
70 5l22:B 540 23 0.0258 0.0185 0.4348 2.4 5l22:A
71 5och:E 576 75 0.0644 0.0434 0.3333 2.5 7ehl:A, 7ehl:B, 5och:A, 5och:B, 5och:D, 5och:F, 5och:G, 5och:H
72 5och:C 537 75 0.0644 0.0466 0.3333 2.6
73 9csi:A 569 74 0.0541 0.0369 0.2838 2.6 8gk7:A, 8gk7:B, 7met:A
74 5da9:B 400 43 0.0387 0.0375 0.3488 2.7
75 7met:B 455 74 0.0541 0.0462 0.2838 2.8
76 8vsi:B 579 63 0.0541 0.0363 0.3333 3.7
77 8sq0:A 1402 65 0.0515 0.0143 0.3077 3.9 8sq0:B, 8sql:A, 8sqm:A
78 6s47:Bi 952 37 0.0412 0.0168 0.4324 4.5
79 7msm:x 553 56 0.0412 0.0289 0.2857 5.3 7msc:x, 7msh:x, 7msz:x, 7mu0:A, 7mu0:B
80 2iw3:B 980 26 0.0335 0.0133 0.5000 5.3 7b7d:EF, 2iw3:A, 2iwh:A, 2iwh:B
81 8e7f:A 614 81 0.0644 0.0407 0.3086 5.4
82 6ha8:V 541 23 0.0258 0.0185 0.4348 6.7
83 8buu:9 573 48 0.0438 0.0297 0.3542 6.9
84 2uz9:A 444 44 0.0412 0.0360 0.3636 6.9 4aql:A, 3e0l:A, 3e0l:B
85 8wbx:B 467 28 0.0361 0.0300 0.5000 7.2
86 5x8p:r 64 37 0.0335 0.2031 0.3514 7.6 6eri:BR, 5mmj:r, 5mmm:r, 4v61:AR, 5x8r:r
87 8f4b:A 1182 65 0.0464 0.0152 0.2769 7.9
88 2ixf:A 255 32 0.0387 0.0588 0.4688 8.2 2ixe:A, 2ixe:D, 2ixf:B, 2ixf:C, 2ixf:D, 2ixg:A, 4k8o:A
89 8i3a:A 562 19 0.0258 0.0178 0.5263 8.3 8i39:A, 8i39:B, 8i3a:B, 8i3b:A, 8i3b:B, 8i3c:A, 8i3c:B, 8iwn:A, 8iwn:C, 8wam:A, 8wam:B, 8wba:A, 8wba:B
90 8t4e:B 551 14 0.0284 0.0200 0.7857 8.4 8t4f:B, 8t4g:B, 8t4h:B, 8t4i:B, 8t4j:B
91 8t4j:A 552 14 0.0284 0.0199 0.7857 9.0 1jj7:A, 8t4e:A, 8t4f:A, 8t4g:A, 8t4h:A, 8t4i:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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