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BioLiP
>protein
QKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQ

The query sequence (length=46) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8h10:A 1026 46 1.0000 0.0448 1.0000 2.02e-23 8h0y:B, 8h0z:A, 8h10:B, 8h10:C, 7zh1:A, 7zh1:B, 7zh1:C, 7zh2:A, 7zh2:B, 7zh2:C
2 8h0z:B 1045 46 1.0000 0.0440 1.0000 2.08e-23 8h0x:A, 8h0x:B, 8h0x:C, 8h0y:A, 8h0y:C, 8h0z:C, 8h14:B, 8h14:C, 8h14:A
3 8tc0:B 1091 46 1.0000 0.0422 1.0000 2.10e-23 8tc0:A, 8tc0:C, 8tc1:C, 8tc1:A, 8tc1:B, 8tc5:C, 8tc5:A, 8tc5:B, 1zv8:A, 1zv8:C, 1zv8:E, 5zvm:A, 5zvm:B
4 7c53:E 93 46 0.8043 0.3978 0.8043 9.87e-20
5 6lxt:E 114 46 0.8043 0.3246 0.8043 1.12e-19
6 7q9f:A 1009 46 0.8043 0.0367 0.8043 2.22e-18 7akd:C, 7l56:B, 7l56:C, 7l56:A, 7q9f:B
7 7wuh:E 1044 46 0.8043 0.0354 0.8043 2.42e-18 7wuh:A, 7xu3:B, 7xu3:A, 7xu3:C, 6zb5:A, 6zb5:C, 6zb5:B
8 7cn8:A 1125 46 0.8043 0.0329 0.8043 2.44e-18 7cn8:B, 7cn8:C, 7ek6:A, 7xu0:A, 7xu1:C, 7xu1:B, 7xu2:A, 7xu2:C, 7xu2:B, 7xu4:A, 7xu4:C, 7xu4:B
9 7xu5:B 938 46 0.8043 0.0394 0.8043 2.44e-18 7xu5:A, 7xu5:C
10 7jji:A 1109 46 0.8043 0.0334 0.8043 2.54e-18 8aaa:A, 7b62:A, 7beh:E, 7bem:E, 8bec:B, 8bec:D, 7d2z:B, 7d30:B, 7dwy:A, 7dwy:B, 7dwy:C, 7e7b:A, 7e7b:B, 7e7b:C, 7f5g:C, 8j1q:C, 8j26:C, 7jji:C, 7jji:B, 7kmh:C, 7l2c:B, 7l4z:B, 7l4z:D, 7l4z:A, 7l4z:C, 7l4z:E, 7ldj:A, 7ly3:A, 7ly3:B, 7q0i:D, 8qh0:A, 7qur:A, 7qur:B, 7qur:C, 7qus:A, 7qus:B, 7qus:C, 7r6w:R, 7sn0:C, 7wd8:B, 7wgv:A, 7wgv:B, 7wgv:C, 7wk8:A, 7x08:A, 7x08:B, 7x08:C, 7x2l:E, 7x93:G, 7xtz:A, 7xtz:C, 7xtz:B, 7xu0:C, 7xu0:B, 7xu1:A, 7xu6:A, 7xu6:C, 7xu6:B, 7xwa:D, 7y0c:E, 7y0c:R, 7yck:A, 7z8o:A, 7zbu:A, 6zp2:A, 6zp2:C, 6zp2:B
11 8cya:A 1100 46 0.8043 0.0336 0.8043 2.54e-18 7nt9:A, 7nt9:B, 7nt9:C, 7nta:B, 7nta:C, 7nta:A, 7ntc:A, 7ntc:B, 8p9y:C
12 7y42:A 968 46 0.8043 0.0382 0.8043 2.54e-18 7y42:B, 7y42:D
13 8bon:B 1070 46 0.8043 0.0346 0.8043 2.72e-18 8bon:A, 8bon:C, 7nd7:A, 7nd7:B, 7nd7:C, 8xut:B, 8xut:A
14 7xog:B 348 46 0.8043 0.1063 0.8043 3.36e-18
15 7tei:B 1042 46 0.7826 0.0345 0.7826 6.11e-18
16 8h3m:C 930 46 0.7826 0.0387 0.7826 7.29e-18
17 8xus:B 1063 46 0.7826 0.0339 0.7826 1.72e-17 8if2:B
18 8hlc:A 1081 46 0.8261 0.0352 0.8261 9.85e-17 7e7d:A, 7e7d:B, 7e7d:C, 8h3e:A, 8h3e:B, 8h3e:C, 8hlc:B, 8hlc:C, 7odl:A, 7odl:B, 7odl:C, 7wgx:A, 7wgx:B, 7wgx:C, 6zb4:C, 6zb4:B, 6zb4:A, 6zoz:A, 6zoz:B, 6zoz:C
19 7od3:A 1012 46 0.7609 0.0346 0.7609 1.38e-14 7od3:B, 7od3:C
20 8opo:A 1195 46 0.5435 0.0209 0.5435 2.24e-10 5kwb:A, 8opm:A, 8opm:B, 8opm:C, 8opn:A, 8opn:B, 8opn:C, 8opo:B, 8opo:C, 8y7y:A
21 7sbw:B 1196 46 0.5652 0.0217 0.5652 5.26e-10 6nzk:A, 6nzk:B, 6nzk:C, 7sb3:J, 7sb3:A, 7sb3:B, 7sb4:A, 7sb4:C, 7sb4:B, 7sbv:J, 7sbv:A, 7sbv:B, 7sbw:J, 7sbw:A, 7sbx:J, 7sbx:B, 7sbx:A, 7sby:J, 7sby:A, 7sby:B
22 8sak:A 1121 46 0.5217 0.0214 0.5217 1.90e-09
23 6nb3:A 1169 46 0.5217 0.0205 0.5217 9.76e-09 5gmq:A, 6j11:A, 6j11:B, 6j11:C, 7m5e:C, 7m5e:E, 7m5e:A, 6nb4:A, 6pxh:A, 6pxh:B, 6q04:C, 6q04:A, 6q04:B, 6q05:C, 6q05:A, 6q05:B, 6q06:C, 6q06:A, 6q06:B, 6q07:C, 6q07:A, 6q07:B, 7ymt:B, 7ymt:C, 7ymv:A, 7ymv:B, 7ymy:B, 7ymz:B, 7yn0:A, 7yn0:B, 7yn0:C
24 8fr7:A 1275 38 0.4348 0.0157 0.5263 1.35e-05 8fr7:C, 8fr7:B
25 6u7k:A 1064 37 0.3913 0.0169 0.4865 0.007
26 6vv5:A 1097 37 0.3696 0.0155 0.4595 0.056 6vv5:B, 6vv5:C
27 7y6t:A 1124 60 0.4565 0.0187 0.3500 0.36
28 7y6t:C 1098 60 0.4565 0.0191 0.3500 0.39
29 7w6m:A 1224 60 0.4565 0.0172 0.3500 0.40 7w6m:C, 7w6m:B, 7w73:C, 7w73:A, 7y6t:B, 7y6u:A
30 4awn:A 260 35 0.3043 0.0538 0.4000 0.82
31 6gym:3 138 42 0.1957 0.0652 0.2143 2.1 8cen:3, 8ceo:3, 7ml0:3, 7ml1:3, 7ml2:3, 7ml3:3, 7o4i:3, 7o4j:3, 7o4k:3, 7o4l:3, 7o72:3, 7o73:3, 7o75:3, 5oqj:3, 5oqm:3, 7zs9:3, 7zsa:3, 7zsb:3
32 7swl:E 480 29 0.2826 0.0271 0.4483 3.8
33 6nro:A 49 27 0.2174 0.2041 0.3704 8.8
34 3j47:U 91 16 0.2174 0.1099 0.6250 9.0

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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