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BioLiP
>protein
QILKELEESSFRKTFEDYLHNVVFVPRPSR

The query sequence (length=30) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 8guy:F 835 30 0.9667 0.0347 0.9667 5.51e-14 6ce7:P, 6ce9:M, 6ce9:P, 6ceb:M, 6ceb:P, 8guy:E, 6hn5:E, 5j3h:E, 7kd6:E, 7kd6:K, 7kd6:Q, 7kd6:W, 5kqv:E, 5kqv:F, 7mqo:F, 7mqo:E, 7mqr:E, 7mqr:F, 4oga:E, 7pg0:B, 7pg2:B, 7pg3:B, 7pg4:B, 7qid:C, 7sl3:A, 7sl3:B, 6sof:A, 6sof:C, 7u6e:F, 7u6e:E, 6vep:E, 6vep:K, 6vep:Q, 6vep:W, 6veq:K, 6veq:E, 3w11:E, 3w12:E, 3w13:E, 4xss:E, 4xst:E, 7yq3:F, 7yq3:E, 7yq4:E, 7yq4:F, 7yq5:F
2 7sl6:A 819 30 0.9667 0.0354 0.9667 6.08e-14 7mqs:F, 7mqs:E, 7sl1:A, 7sl1:B, 7sl2:A, 7sl2:B, 7sl6:B, 7sl7:A, 7sl7:B
3 6hn5:F 323 28 0.9333 0.0867 1.0000 1.31e-13
4 7md5:M 30 27 0.8667 0.8667 0.9630 1.78e-13 7md5:N
5 7sl4:A 786 27 0.9000 0.0344 1.0000 2.09e-12 8dtm:B
6 6jk8:A 823 18 0.4000 0.0146 0.6667 1.16e-04 1igr:A, 7v3p:B
7 6jk8:B 801 16 0.2667 0.0100 0.5000 1.1
8 6ycx:B 817 16 0.2667 0.0098 0.5000 3.9 8a12:A, 8cdm:A, 8cdq:A, 6i7e:A, 6ycx:A, 6ycy:A, 6ycz:A
9 8p5d:LD0 281 19 0.2667 0.0285 0.4211 5.3 8p60:LD0, 8p60:KD0, 7qca:LD0
10 5uwu:C 998 21 0.3333 0.0100 0.4762 7.4 6a38:C, 6a3a:C, 6a3b:C, 6a3c:C, 6a3e:C, 6cit:C, 7cnd:C, 5dh9:C, 5dha:C, 5dhf:C, 5di9:C, 5dif:C, 8hq3:C, 8hq4:C, 8hq5:C, 8hq6:C, 8huf:C, 8hug:C, 8itv:C, 6kft:C, 6m60:C, 6m6x:C, 5uwj:C, 5uwo:C, 5uwp:C, 5uws:C, 6x2p:C, 6x2r:C, 6x2s:C, 6x2u:C, 6x2v:C, 6x2w:C, 6x2x:C, 6x2y:C, 7ypz:C
11 4gpt:C 1017 21 0.3333 0.0098 0.4762 7.6 4gmx:C, 4hat:C, 4hau:C, 4hav:C, 4haw:C, 4hax:C, 4hay:C, 4haz:C, 4hb0:C, 4hb4:C, 5jlj:C, 7l5e:C, 6lq9:C, 5uwh:C, 5uwi:C, 5uwq:C, 5uwr:C, 5uwt:C, 5uww:C, 4wvf:C, 3wyg:C, 6xjp:C, 6xjr:C, 6xjs:C, 6xjt:C, 6xju:C, 5xoj:C, 5ysu:C, 5zpu:C
12 7ena:2 385 19 0.3333 0.0260 0.5263 7.7 8bvw:4, 8byq:4, 8ebs:E, 8ebt:E, 8ebu:E, 8ebv:E, 8ebw:E, 8ebx:E, 8eby:E, 7egb:2, 7egc:2, 7enc:2, 8gxq:HG, 8gxs:HG, 7lbm:a, 7nvr:6, 7nvw:6, 7nvx:6, 7nvy:6, 7nvz:6, 7nw0:6, 6o9l:6, 6o9m:6, 8wak:2, 8wal:2, 8wan:2, 8wao:2, 8wap:2, 8waq:2, 8war:2, 8was:2, 1z60:A
13 4v4n:AO 197 19 0.3000 0.0457 0.4737 7.8 4v6u:BO
14 8egn:A 309 16 0.2333 0.0227 0.4375 9.3 9d9k:A, 8dof:A, 8egm:A, 8egm:B, 8egm:C, 8egm:D, 8egm:E, 8egm:F, 8egm:G, 8egm:H, 8egn:B, 8ewa:A, 8ewa:B, 6x9f:A, 6x9f:B, 6x9f:C, 6x9f:D, 6x9f:E, 6x9f:F, 6x9f:G, 6x9f:H, 6x9n:A, 6x9n:B, 6x9n:C, 6x9n:D, 6x9n:E, 6x9n:F, 6x9n:G, 6x9n:H

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218