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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
PVRVLVDNDPVPTSTEKWGKPGWFERNLARGPKTTTWIWDLHALAHDFETHTSDKEEISRKIFSAHFGHLAVVCVWLSGM
FWHGAYFSNFTAWMENPLGLKPSAQTVWPVFGQEILNDPSTVAKGFEQGGIVITSGLFHLWRAVGFTTTGQLAAMSIAML
IIAALFLFAGWFHYHKRAPKLEWFQNVESMLNHHLAGLFGLGSLFWTGHLIHVALPVKAQLDAGIAPAQVNPFAGLDYGL
MGQYFPKGFGPNGGLGAFFTLNWGQFTDFLTFKGGLEPATGALYLTDIAHHHLAIATLFIIAGHMYRTNWGIGHSIKEML
EAHKGPLTGEGHRGLYEVLTTSWHAQLAINLAMAGSITIIVAHHMYAMNPYPYMGTDYATQISLFTHHMWIGGFLIVGAG
AHAAIFMVRDYDPVTNQNNLLDRVLRHRDAIISHLNWVTLFLGFHSFGLYVHNDTMQALGRPRDMFADFAIPLQPVFAQW
IQNIHAAAPGGATAPWVGGTSPTWYTGALSSAATLQANQVLALANDKISISPIHLGTADFMVHHIFALCIHVTVLILLKG
VLFARSSRLIPDKANLGFRFPCDGPGRGGTCQSSAWDHVFLGLFWMYNTISVVIFHFSWKMQSDVWGTVDRSTGAVNHII
GNTDVLLGGQTVALSQYAASSININGWLRDFLWAQSSAVINSYGGPLSAYGLMFLGAHFIWAFSLMFLFSGRGYWQELIE
SIVWAHNKLKVAPAIQPRALSITQGRAVGVAHYLLGGIATTWAFFLARFLAL

The query sequence (length=772) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7f4v:aA 772 772 1.0000 1.0000 1.0000 0.0 7f4v:bA, 7f4v:cA
2 6k61:A 742 773 0.7189 0.7480 0.7180 0.0 6jeo:aA, 6jeo:bA, 6jeo:cA, 6jeo:dA, 6k61:a, 6tcl:A1, 6tcl:A2, 6tcl:A, 6tcl:AA, 7y3f:A
3 6tra:A 746 775 0.7280 0.7534 0.7252 0.0 4fe1:A, 7fix:A1, 7fix:A2, 7fix:A3, 1jb0:A, 6k33:aA, 6k33:bA, 6k33:cA, 6lu1:A, 7m75:A, 7m76:A, 7m78:A, 3pcq:A, 6pfy:A, 6pfy:G, 6pfy:Y, 6pgk:A, 6pgk:G, 6pgk:Y, 6trc:A, 6trc:a, 6trc:1, 6trd:A, 6trd:a, 6trd:1, 5zf0:A1, 5zf0:A2, 5zf0:A3, 5zf0:A4, 5zf0:A6, 5zf0:A5
4 6kif:A 751 784 0.7137 0.7337 0.7028 0.0 6kif:G, 6kif:e, 6kig:A, 6kig:G, 6kig:e
5 7y5e:AN 745 774 0.6969 0.7221 0.6951 0.0 7y5e:A2, 7y7a:A7, 7y7a:Ao
6 5oy0:A 751 773 0.7111 0.7310 0.7102 0.0 8am5:a, 8asl:a, 8asp:a, 6hqb:A, 4kt0:A, 4l6v:A, 4l6v:a, 4l6v:1, 6nwa:A, 6nwa:a, 6nwa:H, 7o1v:A, 5oy0:a, 5oy0:1, 7umh:A, 7umh:H, 7umh:a, 6uzv:A, 6uzv:a, 6uzv:1, 6vpv:A, 6vpv:a, 6vpv:1
7 5l8r:A 743 774 0.7034 0.7308 0.7016 0.0 8bcv:A, 8bcw:A, 7dkz:A, 7ew6:A, 7ewk:A, 7f9o:A, 7f9o:e, 8htu:A, 8j6z:A, 8j7a:A, 8j7b:A, 7ksq:A, 7kux:A, 6l35:A, 3lw5:A, 2o01:A, 4rku:A, 7wfd:AA, 7wfe:BA, 7wg5:AA, 7wg5:BA, 8wgh:A, 2wsc:A, 2wse:A, 2wsf:A, 4xk8:A, 4xk8:a, 7xqp:A, 4y28:A, 6yac:A, 6yez:A, 5zji:A, 6zoo:A, 6zxs:A
8 7yca:A 742 774 0.6956 0.7237 0.6938 0.0 7a4p:A, 7bgi:A, 7blx:A, 8cmo:A, 7d0j:A, 7dz7:A, 7dz8:A, 8h2u:A, 6ijj:A, 6ijo:A, 6jo5:A, 6jo6:A, 7r3k:A, 7wyi:A, 7wzn:A, 7zq9:A, 7zqc:A, 7zqd:A, 7zqd:A2, 6zzx:A, 6zzy:A
9 7dr0:A 739 773 0.6930 0.7240 0.6921 0.0 7dr1:A, 7dr2:aA, 7dr2:bA, 7dr2:cA, 7dr2:dA
10 8wm6:A 742 773 0.6865 0.7143 0.6856 0.0 8wmj:A, 8wmv:A, 8wmw:A, 7y7b:A, 7y8a:A
11 7blz:A 743 764 0.6956 0.7227 0.7029 0.0 6fos:A, 8wey:A, 5zgb:A, 5zgh:A
12 6igz:A 740 774 0.6839 0.7135 0.6822 0.0 6qph:A, 6rhz:A, 6sl5:A, 6yxr:A
13 7qco:A 728 762 0.6878 0.7294 0.6969 0.0 7qco:E, 7qco:e, 7qco:a
14 6ly5:a 742 774 0.6775 0.7049 0.6757 0.0 6l4u:A
15 7dwq:A 726 756 0.6490 0.6901 0.6627 0.0
16 7lx0:G 751 786 0.6943 0.7137 0.6819 0.0 7lx0:a, 7lx0:A, 6pnj:A, 6pnj:G, 6pnj:a
17 7s3d:A 749 777 0.6645 0.6849 0.6602 0.0 7s3d:G, 7s3d:a
18 6kmw:aA 721 754 0.6684 0.7157 0.6844 0.0 6kmw:bA, 6kmw:cA
19 7coy:aA 685 743 0.6244 0.7036 0.6487 0.0 7coy:bA, 7coy:cA
20 6kmx:aA 717 750 0.6231 0.6709 0.6413 0.0 6kmx:bA, 6kmx:cA
21 7f4v:aB 725 772 0.4702 0.5007 0.4702 0.0 7f4v:bB, 7f4v:cB
22 6kif:B 733 770 0.4676 0.4925 0.4688 0.0 6kif:H, 6kif:f, 6kig:B, 6kig:H, 6kig:f
23 8jjr:a 665 757 0.4275 0.4962 0.4359 0.0
24 6kmw:aB 740 788 0.4495 0.4689 0.4404 0.0 6kmw:cB, 6kmw:bB
25 7y5e:BN 732 770 0.4534 0.4781 0.4545 0.0 7y5e:B2, 7y7a:B7, 7y7a:Bo, 7y7b:B, 7y8a:B
26 7blz:B 731 778 0.4560 0.4815 0.4524 0.0 6fos:B, 8wey:B, 5zgb:B, 5zgh:B
27 8wm6:B 732 764 0.4624 0.4877 0.4673 0.0 8wmj:B, 8wmv:B, 8wmw:B
28 6vpv:B 737 775 0.4534 0.4749 0.4516 0.0 8am5:b, 8asl:b, 8asp:b, 6hqb:B, 4kt0:B, 4l6v:B, 4l6v:b, 4l6v:2, 6nwa:B, 6nwa:b, 6nwa:G, 7o1v:B, 5oy0:B, 5oy0:b, 5oy0:2, 7umh:B, 7umh:G, 7umh:b, 6uzv:B, 6uzv:b, 6uzv:2, 6vpv:b, 6vpv:2
29 6ly5:b 732 768 0.4547 0.4795 0.4570 0.0 6l4u:B
30 7s3d:B 742 781 0.4443 0.4623 0.4392 0.0 7s3d:H, 7s3d:b
31 6igz:B 733 770 0.4456 0.4693 0.4468 0.0
32 7yca:B 732 775 0.4482 0.4727 0.4465 0.0
33 7fix:B1 740 775 0.4482 0.4676 0.4465 0.0 7bw2:B, 4fe1:B, 7fix:B2, 7fix:B3, 1jb0:B, 6k33:aB, 6k33:bB, 6k33:cB, 7m75:B, 7m76:B, 7m78:B, 3pcq:B, 6pfy:H, 6pfy:B, 6pfy:Z, 6pgk:H, 6pgk:B, 6pgk:Z, 6tra:B, 6trc:B, 6trc:b, 6trc:2, 6trd:B, 6trd:b, 6trd:2, 5zf0:B1, 5zf0:B2, 5zf0:B3, 5zf0:B4, 5zf0:B6, 5zf0:B5
34 7qco:B 734 785 0.4521 0.4755 0.4446 0.0 7qco:G, 7qco:g, 7qco:b
35 6kmx:aB 727 776 0.4378 0.4649 0.4356 0.0 6kmx:bB, 6kmx:cB
36 7d0j:B 734 776 0.4352 0.4578 0.4330 0.0 7a4p:B, 7bgi:B, 7blx:B, 8cmo:B, 7dz7:B, 7dz8:B, 8h2u:B, 6ijj:B, 6ijo:B, 6jo5:B, 6jo6:B, 6qph:B, 7r3k:B, 6rhz:B, 6sl5:B, 7wyi:B, 7wzn:B, 6yxr:B, 7zq9:B, 7zqc:B, 7zqd:B, 7zqd:B2, 6zzx:B, 6zzy:B
37 7wfd:AB 734 770 0.4313 0.4537 0.4325 0.0 8bcv:B, 8bcw:B, 7dkz:B, 7ew6:B, 7ewk:B, 7f9o:B, 7f9o:f, 8htu:B, 8j6z:B, 8j7a:B, 8j7b:B, 7ksq:B, 7kux:B, 6l35:B, 5l8r:B, 3lw5:B, 2o01:B, 4rku:B, 7wfe:BB, 7wg5:AB, 7wg5:BB, 8wgh:B, 2wsc:B, 2wse:B, 2wsf:B, 4xk8:B, 4xk8:b, 7xqp:B, 4y28:B, 6yac:B, 6yez:B, 5zji:B, 6zoo:B, 6zxs:B
38 6k61:B 740 775 0.4391 0.4581 0.4374 0.0 6jeo:aB, 6jeo:bB, 6jeo:cB, 6jeo:dB, 6k61:b, 6tcl:B1, 6tcl:B2, 6tcl:B, 6tcl:BB, 7y3f:B
39 8jze:a 670 762 0.3990 0.4597 0.4042 0.0 8jzf:a
40 7lx0:H 739 784 0.4326 0.4520 0.4260 0.0 7lx0:b, 7lx0:B, 6pnj:H, 6pnj:B, 6pnj:b
41 8jw0:a 645 744 0.4365 0.5225 0.4530 0.0
42 6lu1:B 713 768 0.4313 0.4670 0.4336 0.0
43 7dr0:B 706 789 0.4301 0.4703 0.4208 0.0 7dr1:B, 7dr2:aB, 7dr2:bB, 7dr2:cB, 7dr2:dB
44 7dwq:B 659 766 0.4041 0.4734 0.4073 5.53e-172 7coy:aB, 7coy:bB, 7coy:cB
45 8jjr:b 659 759 0.3187 0.3733 0.3241 9.26e-101
46 8jw0:b 617 738 0.3018 0.3776 0.3157 1.69e-98
47 8jze:b 663 758 0.3031 0.3529 0.3087 2.03e-94 8jzf:b
48 7zq9:B2 180 219 0.0920 0.3944 0.3242 1.31e-19
49 5v8k:A 600 231 0.0842 0.1083 0.2814 1.32e-14
50 6m32:A 628 81 0.0311 0.0382 0.2963 0.007 6m32:a
51 8gwa:A 667 81 0.0311 0.0360 0.2963 0.007 8gwa:a, 7uea:A, 7uea:a, 7ueb:A, 7ueb:a, 7z6q:A, 7z6q:a
52 8abs:A 394 70 0.0285 0.0558 0.3143 0.45 8abr:A, 5ofq:A, 5ofq:B, 5ofq:C, 5ofq:D
53 6fnk:A 274 56 0.0259 0.0730 0.3571 1.4 4aw5:A, 4bb4:A, 6fni:A, 6fnj:A, 6fnj:B, 6fnm:A, 2vwu:A, 2vwv:A, 2vww:A, 2vwx:A, 2vwy:A, 2vwz:A, 2vx0:A, 2vx1:A, 2x9f:A, 2xvd:A, 2yn8:A, 2yn8:B, 3zew:A, 3zew:B
54 8eqm:B 483 114 0.0402 0.0642 0.2719 1.9 8eqm:b
55 7vzg:a 858 39 0.0155 0.0140 0.3077 2.7 7vzg:A, 7vzr:A, 7vzr:a
56 8k2m:A 559 84 0.0285 0.0394 0.2619 3.3
57 5v2c:b 506 110 0.0415 0.0632 0.2909 3.6 3a0b:B, 3a0b:b, 3a0h:B, 3a0h:b, 2axt:B, 2axt:b, 5b5e:B, 5b5e:b, 5b66:B, 5b66:b, 7cji:B, 7cji:b, 7cjj:B, 7cjj:b, 7cou:B, 7cou:b, 7czl:B, 7czl:b, 7d1t:B, 7d1t:b, 7d1u:B, 7d1u:b, 6dhe:B, 6dhe:b, 6dhf:B, 6dhf:b, 6dhg:B, 6dhg:b, 6dhh:B, 6dhh:b, 6dho:B, 6dho:b, 6dhp:B, 6dhp:b, 7dxa:b, 7dxh:b, 5e79:B, 5e79:b, 5e7c:B, 5e7c:b, 7eda:B, 9evx:B, 9evx:b, 8ez5:B, 8ez5:b, 8f4c:B, 8f4c:b, 8f4d:B, 8f4d:b, 8f4e:B, 8f4e:b, 8f4f:B, 8f4f:b, 8f4g:B, 8f4g:b, 8f4h:B, 8f4h:b, 8f4i:B, 8f4i:b, 8f4j:B, 8f4j:b, 8f4k:B, 8f4k:b, 4fby:B, 4fby:N, 8gn0:B, 8gn0:b, 8gn1:B, 8gn1:b, 8gn2:B, 8gn2:b, 5gth:B, 5gth:b, 5gti:B, 5gti:b, 5h2f:B, 5h2f:b, 4il6:B, 4il6:b, 8ir5:B, 8ir5:b, 8ir6:B, 8ir6:b, 8ir7:B, 8ir7:b, 8ir8:B, 8ir8:b, 8ir9:B, 8ir9:b, 8ira:B, 8ira:b, 8irb:B, 8irb:b, 8irc:B, 8irc:b, 8ird:B, 8ird:b, 8ire:B, 8ire:b, 8irf:B, 8irf:b, 8irg:B, 8irg:b, 8irh:B, 8irh:b, 8iri:B, 8iri:b, 4ixq:B, 4ixq:b, 4ixr:B, 4ixr:b, 6jlj:B, 6jlj:b, 6jlk:B, 6jlk:b, 6jll:B, 6jll:b, 6jlm:B, 6jlm:b, 6jln:B, 6jln:b, 6jlo:B, 6jlo:b, 6jlp:B, 6jlp:b, 5kaf:B, 5kaf:b, 5kai:B, 5kai:b, 3kzi:B, 5mx2:B, 5mx2:b, 7nho:B, 7nhp:B, 7nhq:B, 4pbu:B, 4pbu:b, 4pj0:B, 4pj0:b, 7rf1:B, 7rf1:b, 7rf2:B, 7rf2:b, 7rf3:B, 7rf3:b, 7rf4:B, 7rf4:b, 7rf5:B, 7rf5:b, 7rf6:B, 7rf6:b, 7rf7:B, 7rf7:b, 7rf8:B, 7rf8:b, 4rvy:B, 4rvy:b, 1s5l:B, 1s5l:b, 5tis:B, 5tis:b, 4tnh:B, 4tnh:b, 4tni:B, 4tni:b, 4tnj:B, 4tnj:b, 4tnk:B, 4tnk:b, 4ub6:B, 4ub6:b, 4ub8:B, 4ub8:b, 5v2c:B, 4v62:AB, 4v62:BB, 4v82:AB, 4v82:BB, 6w1o:B, 6w1o:b, 6w1p:B, 6w1p:b, 6w1q:B, 6w1q:b, 6w1r:B, 6w1r:b, 6w1t:B, 6w1t:b, 6w1u:B, 6w1u:b, 6w1v:B, 6w1v:b, 1w5c:B, 1w5c:H, 5ws5:B, 5ws5:b, 5ws6:B, 5ws6:b, 3wu2:B, 3wu2:b, 7yq2:B, 7yq2:b, 7yq7:B, 7yq7:b, 5zzn:B, 5zzn:b
58 8wql:b1 504 110 0.0427 0.0655 0.3000 5.5 8wql:BD, 8wql:BE, 8wql:B1, 8wql:bD, 8wql:bE
59 7xs4:A 329 28 0.0142 0.0334 0.3929 7.9 6l8k:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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