BioLiP

>protein
PPNAPVVTYSDIVNDLIIMQGTAEAKSQLIITDSEGNTYTLTVPDNGKWSMAIPYPSEGKFTITSVDAIGNRSDDVPLDI
MKEVPVISLSPDSDSGTVGDNITRDKQPTFIIGNLESDVVVVQVDINGTVYNAEKNADGVWFFTPGTPLADGSYTISVIA
SDAAGNQKNSLPITVTIDSTLTVPIDADVTTLSVTVVDRAGNSQQSAS

The query sequence (length=208) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	2yn3:C	284	272	1.0000	0.7324	0.7647	2.57e-133	2yn3:A, 2yn3:B, 2yn3:D, 2yn5:A, 2yn5:B
2	2yn3:C	284	169	0.2788	0.2042	0.3432	4.27e-14	2yn3:A, 2yn3:B, 2yn3:D, 2yn5:A, 2yn5:B
3	4p99:A	415	219	0.3029	0.1518	0.2877	0.002	4kdv:A, 4kdw:A, 4p99:B, 4p99:C, 4p99:D
4	4p99:A	415	191	0.2644	0.1325	0.2880	0.004	4kdv:A, 4kdw:A, 4p99:B, 4p99:C, 4p99:D
5	5k8g:A	511	54	0.1010	0.0411	0.3889	0.13	6x5v:A, 6x5w:A, 6x6m:A, 6x6q:A
6	6bt9:B	626	35	0.0721	0.0240	0.4286	0.17	6bt9:A
7	7dm0:A	167	76	0.1106	0.1377	0.3026	0.53	7dm0:B
8	7uww:A	632	56	0.0962	0.0316	0.3571	0.56	7uwu:A, 7uwu:B, 7uwv:A, 7uww:B
9	3nk3:A	284	88	0.1106	0.0810	0.2614	1.3	3nk3:B, 3nk4:A, 3nk4:B
10	5irb:B	314	82	0.1202	0.0796	0.3049	1.4	5irb:A
11	5irb:B	314	47	0.0913	0.0605	0.4043	3.6	5irb:A
12	8cmk:A	913	28	0.0673	0.0153	0.5000	2.3	8cmk:B, 6gx9:A, 6gx9:B
13	7biz:A	478	165	0.2067	0.0900	0.2606	2.7	7biz:B
14	6vjb:A	1346	67	0.1010	0.0156	0.3134	2.7
15	7edd:A	1394	67	0.1010	0.0151	0.3134	2.8	5xyr:A
16	5xxz:B	1310	67	0.1010	0.0160	0.3134	2.8
17	5xya:A	1358	67	0.1010	0.0155	0.3134	2.9	5xxz:A
18	2azn:A	219	61	0.0962	0.0913	0.3279	5.0	2azn:B, 2azn:C, 2azn:D, 2azn:E, 2azn:F
19	5xv0:F	239	78	0.1298	0.1130	0.3462	5.7	5xux:A, 5xux:B, 5xux:C, 5xux:D, 5xux:E, 5xux:F, 5xv0:A, 5xv0:B, 5xv0:C, 5xv0:D, 5xv0:E, 5xv2:A
20	7ot5:B	66	62	0.0865	0.2727	0.2903	5.9
21	3bs6:A	258	56	0.0769	0.0620	0.2857	8.7

[Back]