BioLiP

>protein
PMKSMSESKCYKNRQVFPQDTNHHHTMFGGTLMANIDEIAAITAMKHAGAQVVTASTDSVDFLKPIKTGDILQYVAMVSY
AGTSSMEVVVQIRIDDVFNNKHDLAALSYLTFVALDDEGKPKHVPGVYPEDDVEKWFYDTAPQRVERRKARRIESKQTIE
YLAQ

The query sequence (length=164) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5egj:A	167	164	0.9939	0.9760	0.9939	6.83e-123	5egl:A, 5egl:B, 5egl:C
2	7cz3:A	168	160	0.4634	0.4524	0.4750	1.86e-47	7cz3:B, 7cz3:C, 7cz3:D, 7cz3:E, 7cz3:F
3	1vpm:A	155	144	0.4329	0.4581	0.4931	8.78e-45	1vpm:B, 1vpm:C
4	1y7u:A	164	160	0.3841	0.3841	0.3937	5.09e-39	1y7u:B, 1y7u:C
5	2eis:A	121	111	0.2744	0.3719	0.4054	1.35e-24	2eis:B
6	6vfy:F	304	131	0.2744	0.1480	0.3435	3.54e-20	2v1o:A, 2v1o:D, 2v1o:B, 2v1o:C, 2v1o:E, 2v1o:F, 6vfy:D, 6vfy:E, 4zv3:A, 4zv3:B, 4zv3:C
7	6vfy:F	304	108	0.1768	0.0954	0.2685	3.50e-08	2v1o:A, 2v1o:D, 2v1o:B, 2v1o:C, 2v1o:E, 2v1o:F, 6vfy:D, 6vfy:E, 4zv3:A, 4zv3:B, 4zv3:C
8	4ien:A	154	129	0.2439	0.2597	0.3101	8.19e-17	4ien:B, 4ien:C, 4ien:D, 5szu:A, 5szu:B, 5szu:D, 5szv:A, 5szv:B, 5szv:C, 5szv:D, 5szy:A, 5szy:B, 5szy:D, 5szy:C, 5szz:A, 5szz:B, 5szz:D, 5szz:C, 5t02:A, 5t02:B, 5t02:C, 5t02:D, 5t02:E, 5t02:F, 5v3a:A, 5v3a:B, 5v3a:C, 5v3a:D
9	1yli:B	148	112	0.2134	0.2365	0.3125	1.99e-15	1yli:A
10	4moc:A	273	144	0.2927	0.1758	0.3333	6.99e-12	3b7k:A, 3b7k:B, 3b7k:C
11	4moc:A	273	82	0.1646	0.0989	0.3293	2.33e-07	3b7k:A, 3b7k:B, 3b7k:C
12	4mob:A	319	86	0.1768	0.0909	0.3372	2.17e-11
13	4mob:A	319	137	0.2378	0.1223	0.2847	8.46e-09
14	7r2v:B	439	50	0.1341	0.0501	0.4400	1.0
15	5slp:D	465	50	0.1341	0.0473	0.4400	1.1	7qgi:D, 7qif:D, 7r2v:A, 5skw:D, 5skx:D, 5sky:D, 5skz:D, 5sl0:D, 5sl1:D, 5sl2:D, 5sl3:D, 5sl4:D, 5sl5:D, 5sl6:D, 5sl7:D, 5sl8:D, 5sl9:D, 5sla:D, 5slb:D, 5slc:D, 5sld:D, 5sle:D, 5slf:D, 5slg:D, 5slh:D, 5sli:D, 5slj:D, 5slk:D, 5sll:D, 5slm:D, 5sln:D, 5slo:D, 5slq:D, 5slr:D, 5sls:D, 5slt:D, 5slu:D, 5slv:D, 5slw:D, 5slx:D, 5sly:D, 5slz:D, 5sm0:D, 5sm1:D, 5sm2:D, 5sm3:D, 5sm4:D, 5sm5:D, 5sm6:D, 5sm7:D, 5sm8:D, 5sm9:D, 5sma:D, 5smb:D, 5smc:D, 5smd:D, 5sme:D, 5smf:D, 5smg:D, 5smh:D, 5smi:D, 5smk:D
16	7egq:X	524	50	0.1341	0.0420	0.4400	1.2	5c8s:B, 5c8s:D, 5c8t:B, 5c8t:D, 5c8u:B, 5c8u:D, 7diy:B, 7egq:K, 7eiz:K, 9fw2:B, 9fz4:B, 9fzk:B, 7mc5:A, 7mc6:A, 7n0b:B, 7n0c:B, 7n0d:B, 7n0d:D, 7n0d:F, 7n0d:H, 5nfy:A, 5nfy:B, 5nfy:C, 5nfy:D
17	9feh:A	264	50	0.1341	0.0833	0.4400	2.1	8bwu:A, 8e1f:D, 8frj:A, 8frk:A, 2qb0:C, 7tw7:A, 7tw8:A, 7tw9:A
18	2q3o:B	367	30	0.0793	0.0354	0.4333	3.0	2g5w:A, 2g5w:B, 2q3o:A, 1q45:A, 1q45:B
19	1up7:A	414	53	0.1037	0.0411	0.3208	3.3	1up6:A, 1up6:C, 1up6:G, 1up7:B, 1up7:C, 1up7:D, 1up7:E, 1up7:F, 1up7:G, 1up7:H

[Back]